Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F1 I0 R1 77 182.3 3253946 97.5% 3172597 265.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 702,331 Δ1 bp 8.1% coding (421/1149 nt) nagA ← N‑acetylglucosamine‑6‑phosphate deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913702,3300C. 8.1% 552.5 / 42.3 173coding (422/1149 nt)nagAN‑acetylglucosamine‑6‑phosphate deacetylase
Reads supporting (aligned to +/- strand):  ref base C (71/84);  new base . (6/8);  total (79/94)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.52e-01

Only 100 of 177 total aligned reads displayed.

GCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTG  >  NC_000913/702051‑702618
                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                  
gcgcCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTa                                                                                                                                                                                                                                                                                         <  1:1255167/289‑1 (MQ=255)
  gcccgccAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTAc                                                                                                                                                                                                                                                                                        <  2:690394/288‑1 (MQ=255)
            ccaggGTCACGACCGGTAATATCCGGCATCGCGGTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGC‑GCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑‑TTTTTTACCAGATTCAGcc                                                                                                                                                                                                                                                                             <  1:55147/287‑1 (MQ=255)
                 ttCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACg                                                                                                                                                                                                                                                                          <  2:516066/286‑1 (MQ=255)
                  tCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                       <  1:257949/288‑1 (MQ=255)
                      gACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTcc                                                                                                                                                                                                                                                                  <  1:1440563/289‑1 (MQ=255)
                         cGGTAATATACGGCATCCCGTTGTACCGATTGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                       <  2:397345/282‑1 (MQ=255)
                              atatACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAAGCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCa                                                                                                                                                                                                                                                           <  1:1120241/289‑1 (MQ=255)
                                    ggCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCTGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTa                                                                                                                                                                                                                                                     >  1:970302/1‑289 (MQ=255)
                                    ggCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCCCTTTGGTAATGACGTCGGCGTTTTCACACAGGAACTCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTa                                                                                                                                                                                                                                                     >  1:1156127/1‑288 (MQ=255)
                                      cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGGTTTCCCACAGGAACTCGACCAGCGAGGCATCAGGCTTACGCAGAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGGCCTAAc                                                                                                                                                                                                                                                   >  1:938229/1‑289 (MQ=255)
                                      cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGATTGCTGATGACTTCCGCAGGAACCATTTCCGGTGACAGGGTCACCTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACACGCGCGCCATCAGGCTTACGAACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTAAGCCACGGACCTGCCAGATGCAGACCTAAc                                                                                                                                                                                                                                                   >  1:667619/1‑289 (MQ=255)
                                       aTCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCTAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTAACACAGGAAATCGACCAGCGCGGCATAAGGCTTACGCACCAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCTACGGACCTTCCAGATGGAGACCTAAc                                                                                                                                                                                                                                                   >  1:669376/1‑288 (MQ=255)
                                         cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCATCGCGGCATCAGGCTTACGCACAACATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTAAGCCACGGACCTTCCAGATGCAGACCTAACg                                                                                                                                                                                                                                                  >  1:1498206/1‑287 (MQ=255)
                                           cgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTg                                                                                                                                                                                                                                              >  1:389870/1‑289 (MQ=255)
                                                tACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                       >  1:1089524/1‑259 (MQ=255)
                                                tACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                       <  2:1089524/259‑1 (MQ=255)
                                                      tGGGTGAGAAAGTTGATCCCCCCGCGGAGACCGGATTTTGCTTCTTTCAACGTCGCGTTGGAGTTACCTGCAGAAACCACAATCCCGGCATTGGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGCGTCACTTTTGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtt                                                                                                                                                                                                                                   <  2:1207195/288‑1 (MQ=255)
                                                        ggTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtttt                                                                                                                                                                                                                                 >  2:1456457/1‑289 (MQ=255)
                                                          tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTCACGCCTGATTCGGATGCTTTg                                                                                                                                                                                                                                >  1:95372/1‑288 (MQ=255)
                                                          tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATCCAGACCTAACGCCTGATTCGGATGTTTTg                                                                                                                                                                                                                                >  1:136383/1‑288 (MQ=255)
                                                          tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATCACGTCGGCGTTTTCACACAGGAACTCGTCCAGCGCGGCATCAGGCTTACGCACACAATTCGGCTTATGGGTG‑C‑‑TTTTTTTCCCAGATTCAGCCACGGACCTTCCAGAGGCAGCCCTAACGCCTGATTCGGCTGTTTTTcc                                                                                                                                                                                                                              >  2:933435/1‑289 (MQ=255)
                                                            gCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGGGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCa                                                                                                                                                                                                                             >  1:1045519/1‑289 (MQ=255)
                                                               aaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCAAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTACAGCTGCAGACCTAACGCCTGATTCGGGTGTTTTGCCAGGt                                                                                                                                                                                                                          >  1:1371688/1‑289 (MQ=255)
                                                                          cggccgGAAACCGGCTTTTGCTTCCTTCAACGTCGCGTTGGAGTGACCCGCAGAAACCACAATCCCGGCATTTGCCAGGTTGCTGATGACTTCCGCAGGAACCAGTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGCAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATa                                                                                                                                                                                                               <  2:1371688/285‑1 (MQ=255)
                                                                           tcgcgTAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAAGTCCGGCATTTGCCAGTTTGCTGATGACTGCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGTGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTTCCAGGTACTCGCGCATaa                                                                                                                                                                                                              <  1:1498331/288‑1 (MQ=255)
                                                                                 aaaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACgcgc                                                                                                                                                                                                         >  2:1380581/1‑288 (MQ=255)
                                                                                 aaaCCGGCTTTTGCTTCTTTCAACGTCGCGGTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCa                                                                                                                                                                                                        <  2:1004458/289‑1 (MQ=255)
                                                                                   aCCGGCTTTTGCTTCTTTCAACGTCTCGTTGGAGTGACCGGCAGAAACTACCATCCCGGCATTTGCCAGGTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGCAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCGTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                     <  1:830260/289‑1 (MQ=255)
                                                                                    ccGGCTTTTGCTTCTTTCAGCGTCGCGTTTGAGTGACCAGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATTACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATTGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                     <  2:409162/289‑1 (MQ=255)
                                                                                                 cttTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAGTCCCGGCATTTTCCAGTTTGCTGATGACTTCCGCAGGAACCATTGCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAg                                                                                                                                                                                        <  1:584152/289‑1 (MQ=255)
                                                                                                           cgcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtg                                                                                                                                                                              >  1:831495/1‑289 (MQ=255)
                                                                                                            gcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGCCCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtgg                                                                                                                                                                             >  1:880283/1‑289 (MQ=255)
                                                                                                                   aGTGACCGGCAGAAACCACAATCCCGGCATTCGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTAGTGGTGa                                                                                                                                                                       <  1:35549/288‑1 (MQ=255)
                                                                                                                    gTGACCGGCAGAAACCACAATCCCGGCAGTTGCCAGTTTGCGGATGAGTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGTCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTGTTTACCAGATTCAGCCACGGACCCTGCAGATGCAGACCTATCGCCTGATTCTGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGAt                                                                                                                                                                      <  1:753125/288‑1 (MQ=255)
                                                                                                                       aCCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTc                                                                                                                                                                                     <  2:1542051/270‑1 (MQ=255)
                                                                                                                       aCCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCAAGCCCTGTTTCATCAGCTc                                                                                                                                                                                     >  1:1542051/1‑270 (MQ=255)
                                                                                                                         cGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGt                                                                                                                                                                <  1:1447052/289‑1 (MQ=255)
                                                                                                                            cAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAACATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAAAGCCTGCTTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACTCCCTGTTTCATAAGCTCCTCGCTTGTGGTGCTAAGCGTCgg                                                                                                                                                             >  1:870900/1‑289 (MQ=255)
                                                                                                                                aaCCGCAAACACGGCATTTGCCAGTTTGCTGATTACATCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGAGCGGCATCAGGCTTACGCAAAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTGCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                          <  2:1154688/288‑1 (MQ=255)
                                                                                                                                aaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                          <  2:325541/288‑1 (MQ=255)
                                                                                                                                aaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                          <  2:970302/288‑1 (MQ=255)
                                                                                                                                aaCCACAATCCCGGCATTTGCCAGTTGGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGGTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTGTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGTATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGc                                                                                                                                                            <  2:847519/286‑1 (MQ=255)
                                                                                                                                      aaTCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtt                                                                                                                                                                                                                                   >  2:1558959/1‑211 (MQ=255)
                                                                                                                                                         ttGCTGAGTACGTCCGCAGGAACCATTTCCGGTGGCAGGGTCACTGTGGTAATGACGTCAGCGTTTTCACACAGGAAATCGACCAGCGCGGCAGCAGGCTTACGCACAAAATTCGGATTATGGGGGCC‑‑TTTTTTTACCAGGTTCAGCCACGTACCTGCCAGATGCAGACCTAACGCCTGATGCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGAACAGCCTGATTTCTCa                                                                                                                                 <  2:870900/288‑1 (MQ=255)
                                                                                                                                                                     tCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTTGTAATGACGTCGGCGTTTGCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGTACCTTCCAGATGCAGACCTAACTCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCa                                                                                                                    <  1:1466490/289‑1 (MQ=255)
                                                                                                                                                                      ccGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCAt                                                                                                                   <  1:347442/289‑1 (MQ=255)
                                                                                                                                                                              aCCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTcc                                                                                                                                                                                                                                                                  <  2:221819/138‑1 (MQ=255)
                                                                                                                                                                              aCCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTcc                                                                                                                                                                                                                                                                  >  1:221819/1‑138 (MQ=255)
                                                                                                                                                                              aCCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCa                                                                                                           >  2:140479/1‑289 (MQ=255)
                                                                                                                                                                                       ggTGCCAGGGTCACTTTGGTAATGACGTCGGCGGTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGGGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCa                                                                                                  <  2:1045519/289‑1 (MQ=255)
                                                                                                                                                                                        gTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCAc                                                                                                 >  1:1040362/1‑289 (MQ=255)
                                                                                                                                                                                        gTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCAc                                                                                                 >  2:552237/1‑289 (MQ=255)
                                                                                                                                                                                          gCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCAt                                                                                                                   >  2:813935/1‑269 (MQ=255)
                                                                                                                                                                                          gCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCAc                                                                                                 >  1:606309/1‑287 (MQ=255)
                                                                                                                                                                                            cAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCt                                                                                              <  2:831495/288‑1 (MQ=255)
                                                                                                                                                                                               tggtacgttGGGAATGACTCCCGCGTTGTCACACAGGAAATCGACCAGCGCGGCATCAGTCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTTCCAGATGCAGCAACGGACCGTCCAGATTCAGACCTAACGCCTGATGCTGATTTTTTGCCAGGTACTCGCTCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  2:482840/281‑1 (MQ=255)
                                                                                                                                                                                               ggTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCGTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTGCGCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  2:878198/288‑1 (MQ=255)
                                                                                                                                                                                                gTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTAGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTGCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  2:1020325/287‑1 (MQ=255)
                                                                                                                                                                                                   aCTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGCTTTCCAGCGTTTCCACGCTGACCGCt                                                                                       >  1:336076/1‑288 (MQ=255)
                                                                                                                                                                                                     tttGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGACTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTTGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGATCGCTTCa                                                                                    >  1:482840/1‑289 (MQ=255)
                                                                                                                                                                                                         gTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  2:1011957/278‑1 (MQ=255)
                                                                                                                                                                                                         gTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           >  1:1011957/1‑278 (MQ=255)
                                                                                                                                                                                                          tagtGACCTCGGCCTTTTCCCACAGGCAATGGCCCAGCGCAGCATCACGCTTACTCACACAATTCGGCTTATGGGTGGC‑‑TTTTTTTACCAGCTTCAGCCACGGCCCCTCCAGCTGCAGACCTAACGCCTGATTCGCATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCTCTGGTTTTGATAAGCGGCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCATCGTTTCCACGCTGACCGCTTCAGCgg                                                                                <  2:765506/285‑1 (MQ=255)
                                                                                                                                                                                                          tAATGACGTCTGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCCGGCTTACGCCCAAAATTCGTATTATTGGTGCC‑‑TTTTTTTACCTGATTCTGCCACGTACCTTCCAGATGCAGACCTAACTCCTGATTCGGTTGTTTTGCCAGGTTCTCGCGCATACCACGTTCGCCCTGTCTCATCCGCTCATCGCCTGTTGTTATTAGCGTCTGTAGCTAGTTAGTAACCCCTGCTTTATCCTTTTCTTTCAGCATGTCTTCCTGCTTTTTCACGCCGACCGCTTCAGCGgt                                                                               >  2:1498356/1‑289 (MQ=255)
                                                                                                                                                                                                          tAATGACGGCGGCAGTTGCACACAGGGAATCTACCATCGCGGCATCAGGCTTACGGACAAAATTCGGATTATGGGTGCC‑‑TTTTTGTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCTGCGTTTCCACGCTGACCGCTTCAGctg                                                                                <  1:1289546/288‑3 (MQ=255)
                                                                                                                                                                                                           aaTGACGTCGTCTTTTTCACACAGTATATCGACCAGCGCGTCATCAGGCTTACGCACAACATGCGGATTATGGGTGCC‑‑TTTTTTTCCCAGATTCAGCCACGGACCTTCCAGATGCAGACCTGACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGAGCACGCCCTGTTTCATTAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGgtg                                                                              <  2:784682/289‑1 (MQ=255)
                                                                                                                                                                                                              gACGTCGGCGTTTTCACACAGGAAATCGACCAGCTCTGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCg                                                                           <  2:1358318/289‑1 (MQ=255)
                                                                                                                                                                                                              gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCg                                                                           <  2:637454/289‑1 (MQ=255)
                                                                                                                                                                                                              gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCg                                                                           <  1:140479/289‑1 (MQ=255)
                                                                                                                                                                                                               aCGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACt                                                                                                                                                                                                                       <  2:1598432/148‑1 (MQ=255)
                                                                                                                                                                                                               aCGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACt                                                                                                                                                                                                                       >  1:1598432/1‑148 (MQ=255)
                                                                                                                                                                                                                   cGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTaa                                                                       >  2:1242202/1‑288 (MQ=255)
                                                                                                                                                                                                                   cGGCGTTTTAACACAGGAAATCGACCAGCGCGGCATCAGGCTTACCCACGAAATTCGGATTATGGGTGCC‑‑TTTTTTTTCCAGATTCAGCCACGGACCTTCCAGAAGCAGACCTATCGCCTGATTGGGATGTTTGGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATATGCGTCGGCAGATAGTTAGTACAGCCGGAATTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCGCGCTGACCGCTTCAGCGGTGTCGTTaaa                                                                      <  2:938229/289‑1 (MQ=255)
                                                                                                                                                                                                                    ggCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAg                                                                                                          <  2:284139/252‑1 (MQ=255)
                                                                                                                                                                                                                        ttttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGAt                                                                                                                                                                                                                                      >  1:1438261/1‑124 (MQ=255)
                                                                                                                                                                                                                        ttttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGAt                                                                                                                                                                                                                                      <  2:1438261/124‑1 (MQ=255)
                                                                                                                                                                                                                                   gAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtt                                                                                                                                                                                                                                   <  1:104587/116‑1 (MQ=255)
                                                                                                                                                                                                                                   gAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCTGCCGCAg                                                      >  1:102115/1‑288 (MQ=255)
                                                                                                                                                                                                                                   gAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAg                                                      >  1:1343721/1‑288 (MQ=255)
                                                                                                                                                                                                                                    aaaTCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACATCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAg                                                      <  1:239875/288‑1 (MQ=255)
                                                                                                                                                                                                                                            cggcgcTGCATCAGGCTTACGCACGAAATTCGGTTTATGGGTGCC‑‑TTTTTTTACCTGATTCTGCCACGGACCGTCCAGATTCAGACCTAACGCTTGATTTGGTTGTTTTGCCAGGTACTCGCGCATAGCGCGCGCTCCCTGTGTGTTCAGCTCATCGGTGGTGGTGATAAGCGTCGGCAGAAAGTTAGTACAGCCTCATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTTCACGCTGACCCCTGCAACTGTGTCGTTAAACTGTACGCCGCCGAAGCCGTTTAAc                                             <  2:1134752/287‑1 (MQ=255)
                                                                                                                                                                                                                                             aGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTCTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtg                                                                                                                                                                              <  1:116227/159‑1 (MQ=255)
                                                                                                                                                                                                                                             aGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTCTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtg                                                                                                                                                                              >  2:116227/1‑159 (MQ=255)
                                                                                                                                                                                                                                               cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTg                                           >  2:70522/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  ggCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  1:1380581/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  ggCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  2:1076801/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              aCGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCg                                                   <  1:431962/265‑1 (MQ=255)
                                                                                                                                                                                                                                                              aCGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCCCATAACGCGCCCGCCCTGTTTCATCAGCTCCTCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGCTTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAACCTGTCCGCCGCCGCAGCCGTTTAACTGCCCATCCATAAACCCg                           >  2:288146/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              aCGCACAAAATTCGGATTATGGGTG‑C‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCCCTTCAGCGGTGTCGTTACACTTTCGGCCGCCGCAGCCGTTTAACCGCCCATCCATAAAACCgg                          >  2:350086/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  acaAAATTCGGATTATGGGTGCC‑‑TTTCTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCggggg                       <  1:288146/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aaaaTTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                          >  2:383228/1‑156 (MQ=255)
                                                                                                                                                                                                                                                                    aaaaTTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                          <  1:383228/156‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aaaaTTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGt        <  2:880283/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aaaTTCGGATTATGGGTGCC‑‑TTTTTTTACCAGGTTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGga                      <  1:101068/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aTTATGGGTG‑C‑‑TGTTTTTACCGGGTTCAGCCACGGACCTTCCAGATGCATACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGcc            <  2:1250677/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                aTGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAAATGTACGCCGCCGCCGCCGTTTAACTGCACATCGCTAAAAACGGGGGAGAGCATGGCCCCg         >  2:393931/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      gCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGt   <  2:389870/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       cc‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  2:709344/251‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       cc‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        >  1:709344/1‑251 (MQ=255)
                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                  
GCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑‑TTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTG  >  NC_000913/702051‑702618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A