Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A16 F19 I0 R1 36 100.3 1742442 97.4% 1697138 269.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 702,331 Δ1 bp 12.3% coding (421/1149 nt) nagA ← N‑acetylglucosamine‑6‑phosphate deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913702,3300C.12.3% 225.9 / 32.0 81coding (422/1149 nt)nagAN‑acetylglucosamine‑6‑phosphate deacetylase
Reads supporting (aligned to +/- strand):  ref base C (34/35);  new base . (7/3);  total (42/39)
Fisher's exact test for biased strand distribution p-value = 3.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.27e-01

ATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTGA  >  NC_000913/702048‑702619
                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                  
aTCGCGCCCGCCAGGCCAGGTTCACGACCGTTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCtttt                                                                                                                                                                                                                                                                                               <  1:414268/288‑1 (MQ=255)
    cgcccgccAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTAc                                                                                                                                                                                                                                                                                          <  2:209668/289‑1 (MQ=255)
     gcccgccAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTAc                                                                                                                                                                                                                                                                                          <  1:589321/288‑1 (MQ=255)
                     tCACGAGCGGTAATAGACGGCAACGCGGTGTACAGATGGGTGGCAAAAGTTATCCACGCGCGGAAACCGGCTTTTGCTTCTTTCATCGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                         <  1:842527/288‑1 (MQ=255)
                     tCACGACCGGTAATATTCGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGa                                                                                                                                                                                                                                                                          <  1:277228/288‑1 (MQ=255)
                         gACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTc                                                                                                                                                                                                                                                                    <  2:751200/289‑1 (MQ=255)
                         caCCGGTAATATACGGCATCGCGTTGTACAGATTGGTGGCAAATGTAATCCCCGCGCGGAAACCGGCGTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTcc                                                                                                                                                                                                                                                                   <  1:94004/288‑1 (MQ=255)
                              gTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGAt                                                                                                                                                                                                                                                               >  1:300734/1‑289 (MQ=255)
                              gTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGAt                                                                                                                                                                                                                                                               >  1:613951/1‑288 (MQ=255)
                                 atatACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCa                                                                                                                                                                                                                                                            <  2:712509/289‑1 (MQ=255)
                                         cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACCGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGGCGACCTaaa                                                                                                                                                                                                                                                    >  1:227693/1‑287 (MQ=255)
                                         cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTaaa                                                                                                                                                                                                                                                    >  1:346571/1‑288 (MQ=255)
                                         cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCGGCCACGGAC‑CTTCCAGATGCCGACCCAAc                                                                                                                                                                                                                                                    >  2:257215/1‑288 (MQ=255)
                                         cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTAGGGGTGCCTTTTTTTACCAGATTCAGCCCCGGAC‑CTTCCAGATGCAGCCCTAAc                                                                                                                                                                                                                                                    >  2:400656/1‑289 (MQ=255)
                                         cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACAACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGAGTATGGGTGCCTTTTTTTACCAGATTAAGCCACGGAA‑CTTCCAGATGCAGACCTAAc                                                                                                                                                                                                                                                    >  1:227176/1‑289 (MQ=255)
                                         cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTCACCGGCAGAAACCACAATCCCGGCATTTACCAGTTGGCTGATGACTTCCTCAGGACCCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACAAAGGAAATAGAGCAGCCCGGCAGCCGGCTTACGCACAAAATTCAGAGTATGGGTG‑CTTTTTTTACCAGATTCAGCCA‑GGACACTTCCCGAtagcgagctaac                                                                                                                                                                                                                                                    >  2:502128/1‑277 (MQ=255)
                                           tggcgGTGTACAGAGTGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTGTTGCGTCTGTCAACGTCACGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCAATTTGGTAATGACGTCGGCGGTTTCACACAGGAAATCGACCAGCGCTGCATCAGGCTTACGCAGAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CGTCCAGATACAGACCTAACGc                                                                                                                                                                                                                                                  <  2:476041/287‑1 (MQ=255)
                                            cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACg                                                                                                                                                                                                                                                   >  1:87272/1‑287 (MQ=255)
                                            cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTAGGAGTGACTGGCAGAAACCACAATCGCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTACGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCGCACAGGAAATCGACCAGCGCGGCATCAGGCGAACGCACAAAATTCGGACTGTGGGTGCCTTTTTTTACCAGATTCAGCCACGGCG‑CTGCCAGATGCAGACGTAACGcc                                                                                                                                                                                                                                                 >  1:567640/1‑289 (MQ=255)
                                                   tACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CGTCCAGATGCAGACCTAACGCCTGATTCg                                                                                                                                                                                                                                          <  2:83112/289‑1 (MQ=255)
                                                   tACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCgg                                                                                                                                                                                                                                         >  1:686320/1‑289 (MQ=255)
                                                        aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGCCGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAACATTCGGATTATTGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTcc                                                                                                                                                                                                                                                                   >  1:646730/1‑259 (MQ=255)
                                                             tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGCAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGc                                                                                                                                                                                                                                                                                >  2:153908/1‑242 (MQ=255)
                                                             tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGc                                                                                                                                                                                                                                                                                <  1:153908/242‑1 (MQ=255)
                                                             tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTg                                                                                                                                                                                                                                 >  2:274728/1‑288 (MQ=255)
                                                             tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCCGCATCAGGCTTACGCACAAACTTCGGATAATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCACATGCATACCTAACGCCTGATTCGGACGTTTTg                                                                                                                                                                                                                                 >  1:192456/1‑288 (MQ=255)
                                                             tGGCAAAGGTAATCCCCGCGCGGAAACCGGATTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATAGACCAGCGCGGCATCAGGCTTACGCACAAAATACGGATGATGGGGGCCTTTTTTTACAAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTTGGATGTTTTg                                                                                                                                                                                                                                 >  1:552554/1‑288 (MQ=255)
                                                                      tAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACt                                                                                                                                                                                                                        <  1:813945/288‑1 (MQ=255)
                                                                          ccccGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCgcgc                                                                                                                                                                                                                   >  1:264620/1‑289 (MQ=255)
                                                                               cgcgGAAACCGGCTTTTGCTTCTTTCAACGTGGCGATGGAGTGCCCGGCAGAAAACACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCCGGAACCAGTTACGGGGCCAGGGGCACTTTGGTAATGACGTCGGCGGTTTCGCATCGGAAATCGACCAGCGCGGCATCCGGCTTACGCAAAAAATTCGGATTATGGGGGACTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCAAACGCCTGATTCGGATGTTTTGCCAGGTAATCGCGCATaag                                                                                                                                                                                                              >  2:383466/1‑288 (MQ=255)
                                                                               cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATTACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCAtcaa                                                                                                                                                                                                              >  1:823597/1‑285 (MQ=255)
                                                                               cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAAc                                                                                                                                                                                                              >  1:151953/1‑289 (MQ=255)
                                                                                    aagccGGCTTTGGCTTCTTTCCACGTCGCGTTGAAGTGACCGGCAGAAACCACAAGCCCTGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAACTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCa                                                                                                                                                                                                         <  1:141598/286‑1 (MQ=255)
                                                                                       ccGGCTTTTGCTTCTTTCAACGTCGCGTTTGAGTGACCGGCAGAACCCGCAAGCCCGGCATTTGCCAGTTTGGTGATGACGTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACCTCGGCGTTTTCACACAGGAAATCGACCATCGTGGCATCAGGCTTACGCATAAAATTCGGATTATGGTTGCCTTTTTTTACCAGATTCAGCCTCGGAC‑CTTCCAGATGCAGACCTAACGCCTGTTTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                      <  2:519305/289‑1 (MQ=255)
                                                                                       ccGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                      <  2:87272/289‑1 (MQ=255)
                                                                                                     tttCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtcatca                                                                                                                                                                                          >  1:618646/1‑287 (MQ=255)
                                                                                                      ttCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCt                                                                                                                                                                                       <  2:111730/289‑1 (MQ=255)
                                                                                                       tCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTc                                                                                                                                                                                      <  2:183755/289‑1 (MQ=255)
                                                                                                            gTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGc                                                                                                                                                                                 <  2:300734/289‑1 (MQ=255)
                                                                                                            gTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGc                                                                                                                                                                                 <  1:383466/289‑1 (MQ=255)
                                                                                                              cgcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtg                                                                                                                                                                               <  2:608853/289‑1 (MQ=255)
                                                                                                                cgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCAAGCCCTGTTTCATCAGCTCATCGCttgt                                                                                                                                                                             >  1:784576/1‑289 (MQ=255)
                                                                                                                               cAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCTTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGc                                                                                                                                                                                                                                                  <  1:851674/205‑1 (MQ=255)
                                                                                                                               cAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCTTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGc                                                                                                                                                                                                                                                  >  2:851674/1‑205 (MQ=255)
                                                                                                                                  atacaacaATCCCGGCAGTGGCGAGTTTGCGGAGGACTTCCTCAGGAACCATTGCCGTGGCCAAGGTCACGTTGGTAATGACGTCGTCGTTTGCACACAGGAAATCGACCAGCGCTGCATCAGGCTTACGCACTAAATTCGGATTATGGGTGCCTTTTTTTACCATATTCAGACACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:436619/284‑1 (MQ=255)
                                                                                                                                  aaaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  1:267041/289‑1 (MQ=255)
                                                                                                                                   atccaaccttcctggaTTTGGCAATTTGCTTGGTACTTCCGACGGAACCGTTGCCGGTGCCAGTGTGACTTTGGTAATTACGTCTGCGTTTTCACCCATGACATCGACCCGCGCGGCATCATGCTTACGCACACAATTCGGATTATTGGTGCCTTTTTTTACCTGATTCAGCCACCTAC‑CTTCCAGATGCAGATCTAACGCCTGATTCCGATGTTTTGCCAGGTACTCTCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGCTAAGCGTCGGCAg                                                                                                                                                           <  2:389349/273‑1 (MQ=255)
                                                                                                                                                     tGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGAt                                                                                                                                        >  1:81246/1‑289 (MQ=255)
                                                                                                                                                             tGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCAtt                                                                                                                                >  1:170745/1‑289 (MQ=255)
                                                                                                                                                                         ccGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCAACGGAG‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTAATCGCTGGTGTTGATAAGCGTCGGCAGATAGTTAGTACAGCGTGATTTATCATTGGCTTTCTg                                                                                                                       >  1:189243/1‑286 (MQ=255)
                                                                                                                                                                         ccGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGCTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCCGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATg                                                                                                                   >  2:639774/1‑289 (MQ=255)
                                                                                                                                                                                  ccATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAg                                                                                                           <  1:491784/289‑1 (MQ=255)
                                                                                                                                                                                      ttCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAGAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGCTGCAGACCTAACGCCTGATTCGGATGTTTTGCAAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATTGTTAGTACAGCCTGATTTCTCATTGGCTTTCCGCATGATTTCCAGCGtt                                                                                                       >  1:364230/1‑289 (MQ=255)
                                                                                                                                                                                      ttCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTAATTGGCTTTCTGCATGATTTCCAGCGtt                                                                                                       >  1:232202/1‑289 (MQ=255)
                                                                                                                                                                                         cGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGGTTTGCCAGGTCCTCGCCCATAACGCTCACGCCCTGTTTCATCAGCTCAACGCTGGTGGTGATAAGCGTCGGAAGATAGTTGCTACAGCCTGATTCCTCATTGGCTTTCTGCATGATTTCAAGCCTTTc                                                                                                     >  2:824696/1‑288 (MQ=255)
                                                                                                                                                                                           gTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCAc                                                                                                  >  1:441393/1‑289 (MQ=255)
                                                                                                                                                                                              ccAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACATCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCAc                                                                                                  >  2:586526/1‑286 (MQ=255)
                                                                                                                                                                                                       cTTTGATAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTAATCGCGCATAACGCGCCAGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGAGTCGGCAGATAGTTAGTACAGCCTGCTTTCTCATTGGCTTTCTGCAGGGTTTCCAGCGTTTCCctgctgcctgatt                                                                                       >  2:327988/1‑281 (MQ=255)
                                                                                                                                                                                                           ggTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCgg                                                                                 <  2:845135/289‑1 (MQ=255)
                                                                                                                                                                                                                 gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCg                                                                            <  2:264620/289‑1 (MQ=255)
                                                                                                                                                                                                                 gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCg                                                                            <  2:441393/289‑1 (MQ=255)
                                                                                                                                                                                                                       ggCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCC‑TTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTaa                                                                        >  2:24910/1‑286 (MQ=255)
                                                                                                                                                                                                                                      gAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCa                                                        >  1:775453/1‑288 (MQ=255)
                                                                                                                                                                                                                                         aTCGTCCCGCGCCGCATCAGGCTTACGCACAAAATTCGGTTTAAGGGGTCCTTTTTTTACCAGTTTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATTTTTTGCCAGTTACTCGCGCATAACGCGCACGTCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTAACCGCTTCAGCGTAGTCTTTAAACTGTACTCCTCCGCAGCCg                                                    <  2:757524/289‑1 (MQ=255)
                                                                                                                                                                                                                                              ccAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTa                                                >  2:496009/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTg                                            >  2:797611/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     ggCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcaca                                        <  1:274728/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      gCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCCGCCGTTTAACTGcaca                                        >  2:698427/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 acacacaAAATTCGGATTATGGGTGCCTTTTTTTACCAGGTTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTTATTCGGATGTTTTGCCAGGTATTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCg                            <  2:244640/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aCGCACAAAATTCGGTTTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCTGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGTCGCCGTAGCCGTTTACCCGCACATCGATAAAACCg                            >  1:392779/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAg                                                       <  2:125768/262‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAg                                                       >  1:125768/1‑262 (MQ=255)
                                                                                                                                                                                                                                                                 aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCg                            <  1:496009/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     acaAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCGTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCgggg                         <  2:151953/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                      caAGATTCGGATTATTGGTGCCTTTTTTTACCATATTCCGGCACGGAC‑CTTCCAGATGCACACCTAACGCCTGATTCGGATGTTTTGCCTGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGga                       <  2:346571/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       aaaaTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGga                       >  1:232147/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       aaaaTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGga                       <  2:232147/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ttCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTTTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACGGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGaa                  <  1:810821/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 ttATGGGTGACTTTTTTTACCGGATTCAGCCACGTAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGTTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGGAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGcc             <  2:660005/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   aTGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTCCAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGcccc           >  2:386245/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                         gCCGTTTTTTTACAGATTCAGCCACTGAC‑CTTCCAGATGCAGACCTAAGGCCTGAGTCGGATTTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATAGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGt    <  2:784576/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          ccTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGGTTCGGATGTTTTCCCAGGTACTCGCGCATAACGCGCACCCCCTGTTTCATCAGCTGATCGCGGGT‑GTGATAAGCGTCGGCAGATAGGTAGAACCGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCACCGCTGACCGCTTCAGCGGCCTGGTTAACCTGTACGCCGCCGCAGCCGTTAGACTACAACCCGTTAAAACCGGGGGAGAGACTGGTCCCCTTCAGtta  >  2:157028/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                                          ccTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTg   >  1:362114/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          ccTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTg   >  2:135013/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          ccTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTGTTGCCAGGTACTCCCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCTCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACTCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGCTAAAACCGGGGGAGAGAATGGCCCCGTTCAGTg   >  2:618259/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                  
ATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAC‑CTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTGA  >  NC_000913/702048‑702619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A