Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A13 F1 I0 R1 73 134.7 2417326 96.9% 2342388 265.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 702,331 Δ1 bp 6.5% coding (421/1149 nt) nagA ← N‑acetylglucosamine‑6‑phosphate deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913702,3300C. 6.5% 326.2 / 18.0 108coding (422/1149 nt)nagAN‑acetylglucosamine‑6‑phosphate deacetylase
Reads supporting (aligned to +/- strand):  ref base C (46/52);  new base . (3/4);  total (52/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.71e-01

Only 100 of 112 total aligned reads displayed.

CGAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTG  >  NC_000913/702043‑702618
                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                 
cgAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGc                                                                                                                                                                                                                                                                                                   <  1:610303/288‑1 (MQ=255)
       cgcgCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCttttttt                                                                                                                                                                                                                                                                                           >  1:1043935/1‑289 (MQ=255)
        gcgcCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTa                                                                                                                                                                                                                                                                                          <  1:286866/289‑1 (MQ=255)
               ccaggccaggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTGCCAGAtt                                                                                                                                                                                                                                                                                   <  1:6091/289‑1 (MQ=255)
                   gccaggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCCCAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAg                                                                                                                                                                                                                                                                                >  1:540814/1‑288 (MQ=255)
                     caggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCa                                                                                                                                                                                                                                                                             <  1:1020981/289‑1 (MQ=255)
                         ttCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACgg                                                                                                                                                                                                                                                                          <  2:736459/288‑1 (MQ=255)
                          tCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGa                                                                                                                                                                                                                                                                         <  1:967876/288‑1 (MQ=255)
                              gACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTc                                                                                                                                                                                                                                                                    <  2:1043935/289‑1 (MQ=255)
                                  ggTAATATACGGCATCGCGTTGTACAGATGGGTGGCAATGGTAATACCCGCCCGGAAACCGGCCTTTGCTTTTTTCAACGTCGCGCTGGAGCGACCGGCAGAAACCACCAGCCCGGCATTTTCCCGTTTGCTGATGACTTCCGTAGGAACCATTTCCGGTGCTTGGGTCACTTTGGTCATGAAGTCGGCGTTTTCACACAGCAAATCCACCAGCGCGGCTTCAGGCCTACCACCAACATTCGGATCATGGGTGCCTTTTTTTCCCAGATTCAGCCACGGAcactcccg                                                                                                                                                                                                                                                                 >  2:831626/1‑281 (MQ=255)
                                     aaTATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGc                                                                                                                                                                                                                                                             <  1:1014190/289‑1 (MQ=255)
                                      atatACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCa                                                                                                                                                                                                                                                            <  1:903438/289‑1 (MQ=255)
                                      atatACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCa                                                                                                                                                                                                                                                            <  2:69069/289‑1 (MQ=255)
                                       tataCGGCATTCCGTTGTACAGATGGGGGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCGTTCAACGTCTCTTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCATGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGa                                                                                                                                                                                                                                                                         <  1:1112080/275‑1 (MQ=255)
                                           cGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTACGGTGCCCGGGCCACTTTGGTAATGACGTCGGCGGTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATCACGGGTGCCCTTTTTTACCAGATTCAGCCACGGCACTTCCAGATTCAGCCCt                                                                                                                                                                                                                                                       >  2:266163/1‑289 (MQ=255)
                                            ggCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTa                                                                                                                                                                                                                                                      >  1:151562/1‑289 (MQ=255)
                                              cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAAc                                                                                                                                                                                                                                                    >  1:1177969/1‑289 (MQ=255)
                                              cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGCGCCTTTTTTTACCAGATTCTGCCACGTACCTTCCAGATGCAGACCTAAc                                                                                                                                                                                                                                                    >  1:225746/1‑289 (MQ=255)
                                              cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGACCAAAATTCGGCTTATGGGGGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGGTGAAGACCTaa                                                                                                                                                                                                                                                     >  2:1148703/1‑288 (MQ=255)
                                              cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCACCGCGCGGAAACCGGCTTTTGCTTCTTTCAAAGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGACCAATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTTACACAGGAAATCGACCAGCGCGGCATCCGGCTTACGCACAAACTTCGGATTATTGGTTCCTTTTTTTACCAGATTCCGCCACGGACGTTCCAGCTGCAGACCTaa                                                                                                                                                                                                                                                     >  2:326879/1‑288 (MQ=255)
                                                 cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATCCAGACCTAACg                                                                                                                                                                                                                                                   >  1:639557/1‑287 (MQ=255)
                                                 cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCAAAATCACGGCATTTGCCAGTTTGCTGTTGGCTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGAGGCATCAGGCTTACGCACAATATTAGGACTATGGGTGCCTTTTTTTATCCGATTCAGCACCCGACCTTCCAGATGCAGACCTAACg                                                                                                                                                                                                                                                   >  1:426892/1‑287 (MQ=255)
                                                             aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGt                                                                                                                                                                                                                                     >  1:495559/1‑289 (MQ=255)
                                                              tGGGTGGCAAAGGTAATCACCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGGCGCGTTGGGGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTGCACACAGGAAATCGACCAACGCGGCATCAGGCTTACGCCCAAAACTCGGAATACGGATGCCTTTTTTTACCAGATTCAGCCACGGACCTTGCAGATCCAGACCTAACTCCTTGATCGGATGtt                                                                                                                                                                                                                                    >  2:331815/1‑289 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   >  1:3300/1‑238 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTg                                                                                                                                                                                                                                 >  1:218742/1‑288 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCG‑TTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   <  1:144176/237‑1 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCG‑TTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   >  2:144176/1‑237 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTGTGCTTCTTTCAACGTCGCGTGGCAGTGACCGGCAAAAACAACAGTACCGGCATTTGCCAGTTGGGCGATGACTTTCACATGCACCGCTTCCGGCGCCAGGGTCACTTTGGTAATCTCTTCGTCGTTTTCACACACGAAAATGACCCGCACGGCATCAAGCTTAAGCACAAAATACAGGTCCCGGGAGCGTTGTTTTGACAGGTTCAGTCAACGACATTCCAGAGGCCGAACTAACGCCTGCTTCGGAAGtgttc                                                                                                                                                                                                                                 >  2:860903/1‑287 (MQ=255)
                                                                   ggCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGcc                                                                                                                                                                                                                               <  2:151562/289‑1 (MQ=255)
                                                                           tAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACt                                                                                                                                                                                                                        <  2:1177969/288‑1 (MQ=255)
                                                                           tAATCCCAGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACt                                                                                                                                                                                                                        <  1:331815/288‑1 (MQ=255)
                                                                            aaTCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAACTTCGGATTATGGGTG‑CTTTTTTTACTAGATTCAGCCACGGACCTTCCAGATGCAGACCTAATGCCTGATTCGGATTTTTTGTCAGGTACTcgc                                                                                                                                                                                                                     >  2:332305/1‑289 (MQ=255)
                                                                              tCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCGGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTcgc                                                                                                                                                                                                                     >  2:291513/1‑288 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGAt                                                                                                                                                                                                                                       <  2:903707/264‑1 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGAt                                                                                                                                                                                                                                       >  1:903707/1‑264 (MQ=255)
                                                                                                     gCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtcat                                                                                                                                                                                            <  1:464212/289‑1 (MQ=255)
                                                                                                                    gcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtgg                                                                                                                                                                              <  2:516580/289‑1 (MQ=255)
                                                                                                                    gcgTTGGAGTGACCGGCAGAAACCACAAGCCCGGCAGTTGCCAGTTTGCTGAAGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATTACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtgg                                                                                                                                                                              <  1:831626/289‑1 (MQ=255)
                                                                                                                      gTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtggt                                                                                                                                                                             <  1:478942/288‑1 (MQ=255)
                                                                                                                               aCCGGCAGAAACCACAATCCCGGCATTTGCCCGCTTGCTGCTGACTTCCGCAGGGCCCATTTCCGCCCCCAGGGTCACTTTGGTAAAGACGTCGGCGCTTTCACACAGGAAATCGCCCAGCGCGTCACCAGGCTTAAGCAATCAATTCGGATCATGGGTGACTTTGTTGAACAGATACGGCCACGGACCTACCAGAATCCGACGGCACCCCTGGTTCGGATGGTCTGCCACGTATTCGCGCAAAACGCGCCCGCCCTGCTTCCTTAGCCCACCGCTGGTAGCGATacg                                                                                                                                                                    >  2:123254/1‑286 (MQ=255)
                                                                                                                               aCCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGCGATAAgg                                                                                                                                                                   >  1:137914/1‑288 (MQ=255)
                                                                                                                               aCCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCCCATCGCTGGTGGTGCTAAGc                                                                                                                                                                   >  1:1042882/1‑289 (MQ=255)
                                                                                                                               aCCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACATTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGAGCATAACGCGCACGCCCTGTTTCCTGAGCTCATCGCTGGTGGGGATAAg                                                                                                                                                                    >  1:1109412/1‑288 (MQ=255)
                                                                                                                                       caaCCACAATCCCGGCATTTCCCAGTTTTCTGATGACTCTCGCAGGAACCAGTTCCGGTGCCAGGTTCACGTTGGTCATGTCGTCGGCGTTTTCACACAAGAAAGCGACCAGCGCGGCATCAGACTTACGCACAAAATTCGGATTAATGGTGCCTTTTTTTACCAGATTCAGCCGCGGACCTTCCAGATGCCGACCTAACGCCTGCTTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCAGCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:426892/288‑1 (MQ=255)
                                                                                                                                       aaaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           >  1:417857/1‑289 (MQ=255)
                                                                                                                                       aaaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:218742/289‑1 (MQ=255)
                                                                                                                                       aaaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  1:326879/289‑1 (MQ=255)
                                                                                                                                        acagtcagatgtgattaggagacggttGCTGTTGACATCCGCATGAACCATTTCCGGTGTCAGGGTCACTGTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCTCGGCATCAGGCTTACGCACAAACTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGTCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTGCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:403613/263‑1 (MQ=255)
                                                                                                                                        aaCCACCATCCCGGCATTTGGCAGTTTGCGGAGGACTTCCCCAGGAACCATGTCCTGAGCCAGGGTCACTTTTGTAATGACGTCGGCGGTTTCACACAGGAATTCGACCAGCGCGGCATCAGGCTTACGCTCAAAATTCGGATTATGTGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCATATGCAGAACTAAAGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCAAAACGGGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:1194312/288‑1 (MQ=255)
                                                                                                                                        aaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  1:291513/288‑1 (MQ=255)
                                                                                                                                        aaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCATCGGCAg                                                                                                                                                           <  1:5828/288‑1 (MQ=255)
                                                                                                                                            acaATCCTGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGAtagtt                                                                                                                                                     >  1:15211/1‑289 (MQ=255)
                                                                                                                                                     gCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCt                                                                                                                                                                                       <  1:467142/247‑1 (MQ=255)
                                                                                                                                                     gCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCt                                                                                                                                                                                       >  2:467142/1‑247 (MQ=255)
                                                                                                                                                     gCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAg                                                                                                                                              >  2:885476/1‑288 (MQ=255)
                                                                                                                                                       aTTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCt                                                                                                                                           <  1:885476/289‑1 (MQ=255)
                                                                                                                                                          tGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   <  2:3040/150‑1 (MQ=255)
                                                                                                                                                          tGCCAGTCTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   >  1:3040/1‑150 (MQ=255)
                                                                                                                                                                 ttGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCAt                                                                                                                                <  2:417857/289‑1 (MQ=255)
                                                                                                                                                                 tggCTGATGACTTCCCCAGGAACCATTGCCGGTGCCAGGGTCACTTGGGTAATGACGTCGGCGTTTTCACACAGGGAAGCGACCAGCGCGGCAGCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTAGTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCAt                                                                                                                                <  2:201058/287‑1 (MQ=255)
                                                                                                                                                                            ttCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTa                                                                                                                                                 >  1:403613/1‑262 (MQ=255)
                                                                                                                                                                              ccGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                      <  2:1185665/207‑1 (MQ=255)
                                                                                                                                                                                    gAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:1074280/244‑1 (MQ=255)
                                                                                                                                                                                    gAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           >  1:1074280/1‑244 (MQ=255)
                                                                                                                                                                                               ggTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtggtg                                                                                                                                                                            >  1:457391/1‑216 (MQ=255)
                                                                                                                                                                                               ggTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtggtg                                                                                                                                                                            <  2:457391/216‑1 (MQ=255)
                                                                                                                                                                                                  gCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTc                                                                                                                                                                                                                       <  2:951428/170‑1 (MQ=255)
                                                                                                                                                                                                  gCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTc                                                                                                                                                                                                                       >  1:951428/1‑170 (MQ=255)
                                                                                                                                                                                                      agtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCAc                                                                                                                                                                                                        >  1:534028‑M1/78‑181 (MQ=255)
                                                                                                                                                                                                      agtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCAc                                                                                                                                                                                                        <  2:534028‑M1/104‑1 (MQ=255)
                                                                                                                                                                                                        gtaagtttGGTAATGGAGCCGCCGTTTTCACAACAGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCATATTATGGGAGCCTTTTTTTACCAGATTCAGCCACGGACCTGCCGGATGCAGACCTACCGCCTGATTCTGATGTTTTTCCAGGTACTCGCGCATAACGCGCACGGCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  2:625781/282‑1 (MQ=255)
                                                                                                                                                                                                        gTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  1:772611/287‑1 (MQ=255)
                                                                                                                                                                                                          gtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCCTCAGCTCATCGCTGGTGGTGACAAGCTCTGGCAGATAGTTCGTCAAGACTGCTTTGCTCNT‑GGCNTTCTGCCAGAtttcaan                                                                                                          <  2:556012‑M1/197‑4 (MQ=255)
                                                                                                                                                                                                            cTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTc                                                                                     >  1:94621/1‑289 (MQ=255)
                                                                                                                                                                                                                     ttgcGTCGGCGTTTTCACACAGTAAATCGACCAGGGCGGCATCAAGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATGCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTTTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCGTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCAGGCTGACCGCGTCAGCGGTGTCg                                                                           <  1:254524/286‑1 (MQ=255)
                                                                                                                                                                                                                           cGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTACGCATGATTTACTGCGTTTCCACGCTGACCGCTTCATCTGTgttgttca                                                                       >  2:294374/1‑286 (MQ=255)
                                                                                                                                                                                                                           cGGCGTTCTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACAGACCTTAGCGATGCACACCTACCGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGTACGCCCTGTTTCATCAGCTCATCGTTGGTGGGGCTAAGCGTCGGCAGATAATTAGTCCAGCCTGCTTT‑CTCATTGGCTTACTGCATGAATTCAAGCGTTTCACCGCTGCCCGCTTCAGCGGTAGCGTTaaa                                                                      >  2:860592/1‑289 (MQ=255)
                                                                                                                                                                                                                            ggCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGACAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGttca                                                                       >  1:1055716/1‑285 (MQ=255)
                                                                                                                                                                                                                                accccacagccccgaaaaagagccagtcagttgcttaactgactggcattaGGATTATGGGTGCCTTTTTTTACCAGATTCAGACACGGACCTTCCAGATGCAGACCCAACGCCTGATTCGGATGATTTGCCAGGTACTCGCGCATAACGCCCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCCGACCGCTTCATCGGTGTCGTTAAacttt                                                                  <  1:562077‑M1/237‑3 (MQ=255)
                                                                                                                                                                                                                                        caGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTAcgccgcc                                                          >  1:521317/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aaaTCGACCAGCGCGGCATCAGGCTTACGCACAAAAGTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCTGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTTTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCTGCTGTGTCGTTAAACTGTACGCCGCCGCAg                                                      <  1:860592/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      gcgcGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACt                                            >  1:330078/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTTATAAG‑‑‑‑GGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACCGTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcaca                                       >  1:567561/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGc                                                                                                                                             >  1:196581/1‑191 (MQ=255)
                                                                                                                                                                                                                                                          ggCATCAGGCTTACGCACATAATTCGGATTATGGGTGCCTTTTGTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  1:511446/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggCATCAGGCTTACGCACACAATTCGGATTATGGGTGCCTTTTGTTACCAGATTCAGCCACGGAACTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  2:1096644/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggCATCAGGCTTACGCACAAAATTCGGATTATTGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  1:294374/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          ctcATCAAGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTGCCAGATGCAGACCTAACGCCTGGTTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTGTAACTGcaca                                       <  2:137914/287‑1 (MQ=255)
                                                                                                                                                                                                                                                              ttgcttaactgactggcattaGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGa                                   <  1:864264‑M1/268‑1 (MQ=255)
                                                                                                                                                                                                                                                                           caAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGTACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCATATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAGCCGGGGga                      <  2:495559/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aaaaTTCGGTTTATGGGTGTATTTTACTACCCGATTCAGCCACGAAACTTCCCGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGCTAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CGCATTGGTTTTCTGCCTGATTTCCATCGTTTCACCGCTGACCGCTTCAGCGGTGTCGTTCAACCTTCCGCCGACGCAGCCGGTTACGTGCACATcctgcaaactggggtag                     >  2:460022/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                            aaaaTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGgag                     >  2:566753/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      ttATGTGTGCCTTTTTTTCCCAGATTCAGCCACGACCCTTCCGAATGCAGACCTAACGCCCGCTTCGGATGCATTGCCAGTTACGCGGGCATAACGTGCACCCGCTGTTTCATCAGCTCATCGCTGGTGGTGAGAAGCGTCGGCAGATAGTTAGTACATCCTCATTT‑CTCATTGGCTTTCTGCATGATTTCCATCGTTTCCCCGCTGACCGCTGCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGAGAAAACCGGGGGAGAGAATGGcc            <  2:1055716/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      ttATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGcc            <  2:540814/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      ttATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  1:886672/259‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      ttATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        >  2:886672/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                                          gggTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCCGACCTAACGCCTGATTCGGAGGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTATTTGGCTTGCTGCATGATTTGCAGCGTTTCCACGCTGACCGCTTCAGCGCTGTCGTTACACTGTACGCCGCCGCGGCCGTTTAACTGCACACGGATACACCCGGGGTAGAGAATGGCTCCGt        >  2:879170/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                               ccTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCCGCGTTTCCACGCTGACCGCTTCCGCGGTGTCGTTAAACTGTCAGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGt   >  1:650274/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                               ccTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTg  >  2:233354/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                 
CGAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTT‑CTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTG  >  NC_000913/702043‑702618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A