Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,609,768 T→G 14.5% G118G (GGT→GGG)  prfC → peptide chain release factor RF‑3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,609,7680TG14.5% 284.0 / 3.3 141G118G (GGT→GGG) prfCpeptide chain release factor RF‑3
Reads supporting (aligned to +/- strand):  ref base T (61/49);  new base G (22/6);  total (86/55)
Fisher's exact test for biased strand distribution p-value = 3.08e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 141 total aligned reads displayed.

TCAGACCGCCGGTACAGTAAAAGGCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTA  >  NC_000913/4609534‑4610003
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                               
tCAGACCGCCGGTACAGTAAAAGGCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGCAACCCCGGGGCACGACGACTTCTCGGAAGATACCTACCGTACCCTGCCGCCGGTGGCCTGCTGCCCGTTGGTTATCCACGCAGCCAAAGGGGTTg                                                                                                                                                                                                                                             >  2:891104/1‑239 (MQ=255)
 ttttataagggacagggaaaaGGCCGGTGGTCCAACCATGCGC‑CTAAGGCGGAATGGATGGAGATGGAAAAGCAACGTGGGATCT‑CCCTTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTg                                                                                                                                                                                                                                             <  2:597835/221‑1 (MQ=255)
       gccgGTACAGGAAAAGGCCGTGGTTCCAACCT‑GCACGCTAAGGCGGGCTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGGTTGGGATGCAGTTTCCGTAACACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCg                                                                                                                                                                                                                                      <  2:606897/239‑1 (MQ=255)
              cAGTAAAAGGCCGTGGTTCCAACCA‑GCACGCTAAGGCGGACTGGATGGGTATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACTCCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGt                                                                                                                                                                                                                               <  1:567713/239‑1 (MQ=255)
                gTAAAAGGCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGGGGGTTATCTACGCCGCAAAAGGGGTGGaaaacactgcttttta                                                                                                                                                                                                                             >  2:1290913/1‑225 (MQ=255)
                   aaaGGCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGCGGACTGCGGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGAAGATCTGACCCCTaa                                                                                                                                                                                                                             >  1:566345/1‑236 (MQ=255)
                     aGGCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCGGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGa                                                                                                                                                                                                                        <  2:831837/239‑1 (MQ=255)
                      ggCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGt                                                                                                                                                                                                                               >  1:1200605/1‑231 (MQ=255)
                      ggCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTAACGACGCCGCAAAAGGTGTTGAAGATCGTACCCGt                                                                                                                                                                                                                               <  2:1200605/231‑1 (MQ=255)
                      ggCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCCGACGGTTATCGACCCCCCAAAAGGGGTTGAAGATCGTACCCCCAAGCTGAt                                                                                                                                                                                                                       >  2:281016/1‑239 (MQ=255)
                         cGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGCCGGCGGTGGACCGCTCCCTGAGGGTTATCGACCCCGCAAAAGGGTGTGAAAATCGGACCCGTAAGCTGATGGa                                                                                                                                                                                                                    >  2:634665/1‑239 (MQ=255)
                         cGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATGGACGCCGCCAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGa                                                                                                                                                                                                                    >  1:237279/1‑239 (MQ=255)
                         cGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCAATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGAACCCGCCAAAGGTGTGGAAGATCGGACCCGGAAGCGGATggg                                                                                                                                                                                                                    >  2:1293190/1‑238 (MQ=255)
                           tGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATTCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCACGGGGCACGACGACTTCTCGGAAGATACCTATCGTACCACGCCGGCGGGGGCCTGCTGACTGAGGGGTATCACCCCCGCACAAGGTGTTGTAGATCGGACACggagagtggttgaag                                                                                                                                                                                                                  >  2:879643/1‑225 (MQ=255)
                           tGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTTCCTGATGGTTATCGACGCCGCAAAAGGGGTGGAAGATCGTCCCCGGAAGCTGATGGAAg                                                                                                                                                                                                                  >  2:38896/1‑239 (MQ=255)
                           tGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTGTAAGATCGTAccctgtctcttataacca                                                                                                                                                                                                                  >  1:597835/1‑224 (MQ=255)
                           tGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGCGTGGAAGATCGGACCCGTACACTGATGGaat                                                                                                                                                                                                                  >  1:555464/1‑238 (MQ=255)
                           tGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGCGGACTGCTGCCTGAGGGTTACCGACGCCCCAAAAAGGGTGGAACAGCCGACCCGTAAGCGGATGGaga                                                                                                                                                                                                                  >  2:444920/1‑237 (MQ=255)
                           tGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCAATCGTACCCTGACGGCGGTGGCCTGCTGCCTGATGGGTAGCGGCGCCCCAAAAGCTGTTGAAGTTCGTACCCGTAAACTGCTGGaaa                                                                                                                                                                                                                  >  1:327758/1‑238 (MQ=255)
                                         cACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGCCGGCGGTGGACTGCTGGCTGACGGTTATCGAACCCGCAAAAGGGGTTGAAGACCGGACCCGGAAACTGATGGGAGGTACCCgacggcc                                                                                                                                                                                                     >  2:1029296/1‑233 (MQ=255)
                                         cACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGCAATACGTAACCCTAAGCGTAGGGAGTTTACCCGTCGgcg                                                                                                                                                                                                     >  1:1317453/1‑239 (MQ=255)
                                                aGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTg                                                                                                                                                                                                                                             <  1:839675/192‑1 (MQ=255)
                                                 tctggattgactggaaagggaAAAGTGGCGCGGGTTCC‑CCATTTCTCCGTCTGGTATGCAGTTGCCGTTTCCAGATTCCCTGGTTAACCTGTCCGACCCCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGAATGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGc                                                                                                                                                                                            <  2:1234886/228‑1 (MQ=255)
                                                 gtcggcttgtgtggaggtggaAAAGCCGCGTGGGATCC‑CCATTTCTGCGGTTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGCCTTCGCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGc                                                                                                                                                                                            <  2:432446/228‑1 (MQ=255)
                                                 gTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGGGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGAAGCTCGTACCCGTAAGCTGATGGGAGTTACCCGTCTCCGCGAAA‑Cg                                                                                                                                                                                             >  1:987961/1‑238 (MQ=255)
                                                 agagacagggatggaGATGGAAAAGCAGCGGGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACCCCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGc                                                                                                                                                                                            <  1:429422/231‑1 (MQ=255)
                                                   tggACTGGTTGGCGATGGAAAAGCTGC‑TGGGGTCTCCCATTTCTGCGTCTGGTATGCCTTGTCCGTATCACGATTGCCTGGTTACCCTGCTCGACACCCCGGGGCACGAAGACTTCTCGTAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTCATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGc                                                                                                                                                                                            <  2:552836/236‑1 (MQ=255)
                                                   cGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCC‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGc                                                                                                                                                                                            <  1:38896/237‑1 (MQ=255)
                                                        tggagggtGATGAAAAAGCAGGGGGGGACCC‑CCATTACTGCGGCTGTGATGCAGGTCCCGTATCACGATTGCCTGGTTAACCTGCTCGAACCCCCGGGGCACGAAGACTGCTCGGAAGATACCGATCGTACCCTGACGGCGGTGGACTGCTGCCGGATGGTTATCGACGCCGCAAAAGGGGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCt                                                                                                                                                                                    <  2:846684/239‑1 (MQ=255)
                                                          gatggggatggaAAAGCAGGGTGGGACTC‑CCATTACTACGTCTGTGAGGCAGTTTCCGTATCACGATTGCCTGGTTACCCTGCCCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCa                                                                                                                                                                                  <  2:1179070/239‑1 (MQ=255)
                                                                    gaAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCCCGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGCGGCATGCTGCCTGATGGTTATCGACTCCGCAAAAGGCTTGTCAGGTCGACCCAGGAAGGCGATGTAAGTTAACCGCCTACGGCAAA‑CGCC‑GACCCCCC‑CCTTCATGaa                                                                                                                                                                       >  2:590267/1‑239 (MQ=255)
                                                                    gaAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGGTACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTTTGaa                                                                                                                                                                       >  1:225419/1‑239 (MQ=255)
                                                                    gaAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCCAAAGGTGTTGAAGATCGTACCCGTAAACTGATGGAAGTTACCCGCCTCCGCGACA‑CGCC‑GAACCCCA‑ccccgtccat                                                                                                                                                                       >  2:429422/1‑231 (MQ=255)
                                                                    gaAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAACAGGTGTTGAAGACAGGACCCCTAAGCGGTATGAGGTAACCCGCCGCCCCGACA‑CCCC‑GCACCCCC‑CCTTTTTGac                                                                                                                                                                       >  2:831692/1‑238 (MQ=255)
                                                                    gaAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGaa                                                                                                                                                                       >  1:770852/1‑239 (MQ=255)
                                                                             cGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCg                                                                                                                                                                                                                                      >  1:492744/1‑170 (MQ=255)
                                                                             cGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCg                                                                                                                                                                                                                                      <  2:492744/170‑1 (MQ=255)
                                                                             cGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGGTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTCCGGGACA‑CGCC‑GATCCTCC‑CCTTTATGAAAAAAA‑TTg                                                                                                                                                              >  2:305986/1‑238 (MQ=255)
                                                                             cGTGGGATCC‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACCCCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCt                                                                                                                                                                                    <  1:172257/218‑1 (MQ=255)
                                                                                       cccATTTCTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑t                                                                                                                                                                <  1:442177/226‑1 (MQ=255)
                                                                                          ttttctcctcctgttttgcgttttCCGTTTCCCGATTCCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTCCCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCcg                                                                                                                                                 <  2:1163405/218‑1 (MQ=255)
                                                                                           ttACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGCTGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCGGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGCCCGTGATATCcg                                                                                                                                                 >  1:301583/1‑238 (MQ=255)
                                                                                                 cGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTCACCTGACGGCGGTGGACTGCTGCCTGATGGTTTTCGACCCCGCAAAAGGTGTTGAAGATCGTAGCCCAAAGTTCATGGCAGTTCCCCGTCCGCCCG‑CA‑AGCCACATCCTCA‑CCTTTATGAAAAAAC‑TTTACCGTAAAATCcgcgccacg                                                                                                                                          >  2:646/1‑234 (MQ=255)
                                                                                                 cGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTa                                                                                                                                                                                                               >  2:686010/1‑174 (MQ=255)
                                                                                                 cGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGGGACA‑CGCC‑GAACCTCA‑CCTTTATGAACAAAC‑TTGACCGGGATATCCGGGACCCg                                                                                                                                          >  1:1163405/1‑239 (MQ=255)
                                                                                                 cGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGCCA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGAGATCCGCGAccc                                                                                                                                           >  1:189602/1‑238 (MQ=255)
                                                                                                 cGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGCCTGGGCGACA‑CGCC‑GAACCCCA‑CCCTTTTGAACAAAC‑TTAACCgggtaaatgactcttaa                                                                                                                                          >  2:442177/1‑223 (MQ=255)
                                                                                                 cGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCG‑GTACGCGGCACCGCC‑GATCCTCA‑CCTTT‑TGTAAAAACATTGAACGGGAAATCCGCAACCCg                                                                                                                                          >  2:1226969/1‑239 (MQ=255)
                                                                                                   tCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGCCGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTCCCCGTAAGTTGTTGGAAGTAACCCGTCTGGGCGACA‑CGCC‑GATCCTAA‑CCTTTTTGAAAAAAC‑TTGACCCGGAGATCcgcacccccat                                                                                                                                        >  1:446262/1‑231 (MQ=255)
                                                                                                   tCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCCCGCACCGAt                                                                                                                                        >  1:1185183/1‑239 (MQ=255)
                                                                                                   tCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GACCCCCA‑CCTTTATGAACAAAC‑TTGACCGGGATATCCCAGAccc                                                                                                                                           >  1:544779/1‑236 (MQ=255)
                                                                                                      gtgATACAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGCCGCCGCAAAAGGTGTTGAAGATCGTACCCGTAGCCTGATGGACGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCC‑CCTTTATGAACAAAC‑TTGCCCGTGAAAACGGCGAccccgaggc                                                                                                                                     >  2:907857/1‑233 (MQ=255)
                                                                                                       tgATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCTCAAAAGGTGCTGAAGATGGTAGCCGTAAGCGGATGGAAGTTAACCGTCTGGCCGACA‑AGCC‑G‑CCCGCACCCTTTATGAAAAAAC‑TTGACCGTgtaacacgggcaccgcgggg                                                                                                                                     >  2:740323/1‑219 (MQ=255)
                                                                                                         aTGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGAGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTTTGAACAACC‑TTGCCCGGGTAATCCGCGAccccctggc                                                                                                                                     >  1:545488/1‑230 (MQ=255)
                                                                                                           ggaGTTTCCGTTGCGCGATTGCCTGGGTAACCTGCTCGAACCCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAgctg                                                                                                                                 <  1:646/236‑1 (MQ=255)
                                                                                                                 tCCGTATCAAGATTGCCTGGTTACCCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATg                                                                                                                          <  1:1029296/239‑1 (MQ=255)
                                                                                                                   cGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATCCCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCTCAAAAGGGGTTGAAGATCGTACCCGTACACGTATGGAAGTTACCCGTCTTGGCGGCA‑CACC‑GGGCCTCC‑CCTTTTTGGACAAAC‑TTTGCCAGGGTAACCGCCACCCCATGGaacgtctccggaaa                                                                                                                        >  2:908859/1‑226 (MQ=255)
                                                                                                                             ttGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCt                                                                                                                                                                                    >  1:424383/1‑171 (MQ=255)
                                                                                                                             ttGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCt                                                                                                                                                                                    <  2:424383/171‑1 (MQ=255)
                                                                                                                                       aaCCTGCGCGACCCCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAAt                                                                                                    <  1:305986/239‑1 (MQ=255)
                                                                                                                                             cTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTTAGAACGAGCTGAAAATCGGCtg                                                                                              >  1:953903/1‑239 (MQ=255)
                                                                                                                                              tCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCCATGGGGCTGCTCGATGAAGTTGAGAACAAGCTGGAAACCGGCttt                                                                                             >  1:741690/1‑237 (MQ=255)
                                                                                                                                                       cGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGtt                                                                                                                                                                                                                                              <  2:239824/89‑1 (MQ=255)
                                                                                                                                                       cGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGtt                                                                                                                                                                                                                                              >  1:239824/1‑89 (MQ=255)
                                                                                                                                                       cGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGGGCGCCGAt                                                                                     >  1:1058693/1‑238 (MQ=255)
                                                                                                                                                          ggCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAg                                                                                                                                    >  1:220674/1‑188 (MQ=255)
                                                                                                                                                            cccgaagcttttcgggaatgttccTATGTTACCCTGGCGGGGGGGGACTGCTGCCGGAGGGTGATCGAAGCCGCAAAAGGGTTTGAAGTTCGTACCCGTAAGCGTATGGAAGTTACCCGTCTGGGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCt                                                                                <  2:489318/216‑1 (MQ=255)
                                                                                                                                                               gAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGTCCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAATTGGGAACAAGCCGAAAAACGGCTGTGCGCCCATAACCTGGcc                                                                            >  2:237246/1‑239 (MQ=255)
                                                                                                                                                               gAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGcc                                                                            >  1:226482/1‑239 (MQ=255)
                                                                                                                                                                                      tCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCAGGCCGATTGGCTGCGGCAACCTGTTTa                                                     >  1:1083297/1‑239 (MQ=255)
                                                                                                                                                                                      tCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGAGGAAGTTGAGAACGAGCTGAAAATCGGCTGTGGGCCGATCAc                                                                                  >  1:489115/1‑210 (MQ=255)
                                                                                                                                                                                       cctccccTGGGGGGGGGGGACTGTTGCCTGATGGTTACCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGAGGGAAGTTACCCGTCGGCGCGACA‑CGCC‑GATCCTCC‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTaa                                                    <  2:226482/235‑1 (MQ=255)
                                                                                                                                                                                       cGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGGGATATCCGCGACCCGATGGGGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTTTGCGCCGACCCCCTGGCCGATTGGCGGGGGCAAGCAGTTTaa                                                    >  2:67130/1‑239 (MQ=255)
                                                                                                                                                                                         tccccGGACGGGGGTGGACTGCTGCCTGAGGGTTATCGACGCCGCAAAAGGTGTTGAAGACCGTTCCCTTAAGCTGATGGAAGTTCCCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAg                                                  <  1:1318087/237‑1 (MQ=255)
                                                                                                                                                                                           cccTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGGGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGTTTGGCTGCGGCAAGCTGTTTAAAgcg                                                >  1:7838/1‑237 (MQ=255)
                                                                                                                                                                                           cccTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGc                                                >  1:1015883/1‑239 (MQ=255)
                                                                                                                                                                                           cccTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGGGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GCTCCTCA‑CCTTTATGAACAAAC‑TTGACCGGGATATCCCCGACCCGATGGACCTGCTCGATGAAGTTGAGAACGAGCTGAAAAACGGCAGGGGCCCGGTCACCTGGCCGATTGGCTGGGGCCAACGGGTTAAAggg                                                >  2:556901/1‑238 (MQ=255)
                                                                                                                                                                                           cccTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAAGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGACCTGCCCGAGGAACTTTGGAACGAGCTGAAAAATGGCTGGGCGCCCGTCCCCCGGCCCGTTGGCGGGCGGAAACTGGTTAAAAGc                                                >  2:13494/1‑239 (MQ=255)
                                                                                                                                                                                             cTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCCCCTGGCCGATTGGCTGCGGCAAGCGGTTTAAAGGCGt                                              >  1:389713/1‑239 (MQ=255)
                                                                                                                                                                                              tGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGCTATCCCCGACCCGCTGGAGCTGCCCGATGCAGGTGGAAACGAGCTGAAAATACGCTGGGCGCCCGTCCCCTGGCCGATTGGCTGCGGAAAACGATTTAAAGGGGtt                                             >  2:740325/1‑239 (MQ=255)
                                                                                                                                                                                              tGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GAACCTAC‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGCCCCGATGGAGCTGCTCGAGGAAGTTGGAAACGAGCTGAAAATAGGCTGTGGGCCGATCCACCGGCCGATTGGCGGGGGCAGACTGTTTAAAgggggt                                             >  2:1372746/1‑235 (MQ=255)
                                                                                                                                                                                                aCGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGGGAACGGGCTGAAAATCGGCTGGGCGCCGATCACCTGGCCGATTGGTGGCGGCAGACGGTTTaagagggttg                                            >  2:1318087/1‑230 (MQ=255)
                                                                                                                                                                                                aCGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGGGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGGGCGCCGCTCACCTGGCCGATTGGCTGGGGAAACCTGTTTAAAGCCGtttc                                           >  1:459733/1‑238 (MQ=255)
                                                                                                                                                                                                  gggggTGGACTGCTGCCTGAGGGTTTTCGAACCCGCAAAAGGTGTTTAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTac                                          <  1:861797/235‑1 (MQ=255)
                                                                                                                                                                                                  ggcggTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAATTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTac                                          <  1:740325/238‑1 (MQ=255)
                                                                                                                                                                                                                 ccTGATGGTTATCGCCGCCGCAAAAGTTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACg                          <  1:1293190/239‑1 (MQ=255)
                                                                                                                                                                                                                 ccTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGAGGAAGTTGGGACCGAGCTGAAAATCGGTCGGGGGCCGGTCCCCTGCCCATTTGGATGAGGCAAGCTGTGTAAGGGGGTTTACCACATTTAaaaaagcg                          >  2:495478/1‑235 (MQ=255)
                                                                                                                                                                                                                     tggtttATGGTCGCCGCAAAAGGGTTTGAAGTTTCGCCCCGCAAGCGGATGGAAGTTTCCCGACTGCGCGACA‑CGCC‑GATCCTCA‑CCGTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCGGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAAc                      <  2:544779/235‑1 (MQ=255)
                                                                                                                                                                                                                     aTGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGCTTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTTTAAAGACGaa                        >  1:699613/1‑237 (MQ=255)
                                                                                                                                                                                                                      tGGTTAACGACGCCGAAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAAc                      <  1:72493/238‑1 (MQ=255)
                                                                                                                                                                                                                       gtttttcgcccccccAAATGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTCGGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCt                    <  2:1058693/225‑1 (MQ=255)
                                                                                                                                                                                                                       gtttttcgcccacgaaaaaGGTGTGTAAAATCGTCACTGAAAGCTGATGGAAGTTCCCCGTCTGCGCGACC‑CCCC‑GATCCTGA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCt                    <  2:699613/224‑1 (MQ=255)
                                                                                                                                                                                                                          ttccGACGCCGAAAAATGTGTTGAAGTACGTACCCGTAAGCTGATGGAAGTTACCCGTCCGCCCGACC‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTAt                  <  1:831692/235‑1 (MQ=255)
                                                                                                                                                                                                                           aTCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTAtct                >  1:893624/1‑239 (MQ=255)
                                                                                                                                                                                                                                   cgcAAAAGGTTGTGAAGATCGTACCCGGAAGCTGATGGAAGGTTACCGTGTGCGCGACA‑CGCC‑GATCCTTA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCaga        <  1:590267/239‑1 (MQ=255)
                                                                                                                                                                                                                                   cgcAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCG‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTCCCCGCTGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCCGGCCGATTGGCCGCCGCCAGCTGTTTAAAGGGGTTTACCACCTTTATaaaacagaaaactaatccttcaaaa        >  2:539417/1‑217 (MQ=255)
                                                                                                                                                                                                                                   cgcAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGCTCACCTGGCCGCTTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTACCTCTATCaaa        >  2:411885/1‑237 (MQ=255)
                                                                                                                                                                                                                                    gcAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCagag       <  1:1215872/239‑1 (MQ=255)
                                                                                                                                                                                                                                    gcAAAAGGTGTTGAAGATCGGACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCagag       <  1:13494/239‑1 (MQ=255)
                                                                                                                                                                                                                                         aGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTa  <  1:1226969/239‑1 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                               
TCAGACCGCCGGTACAGTAAAAGGCCGTGGTTCCAACCA‑GCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCT‑CCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACA‑CGCC‑GATCCTCA‑CCTTTATGAACAAAC‑TTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTA  >  NC_000913/4609534‑4610003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A