Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A12 F52 I0 R1 83 172.7 3180974 97.2% 3091906 265.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,708,844 C→G 5.8% A642A (GCC→GCG)  rsxC → SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,8440CG 5.8% 239.0 / 4.5 93A642A (GCC→GCG) rsxCSoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (45/39);  new base G (4/2);  total (51/42)
Fisher's exact test for biased strand distribution p-value = 6.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01

GACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGA  >  NC_000913/1708557‑1709121
                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                      
gacgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTAGCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCg                                                                                                                                                                                                                                                                                       <  1:1383094/289‑1 (MQ=255)
 acgcggtaacagcggCTGAGCCCCGTAAAACCGCCGTTGAGGCAGCTAGCTCCCGGGCACAAGCGCGCAAGCAGGAACAGCAACAGGCTAATGGCGAACCAGAACAACAGGGCGATCCACGAAAAACCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGa                                                                                                                                                                                                                                                                                      <  2:34127/275‑1 (MQ=17)
  gcaagcaACCGTTGATGATCAACGTAAAACTGCCGGTTGAGAAGCTATGCACGGCCCAAAAACGGGAAAGGTGAAAAAACAACAGGCTAATGCGGAACCATAACAGCGGGGCGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATGGCCCGGGCCAAAGCGAGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGa                                                                                                                                                                                                                                                                                      <  2:633555/285‑1 (MQ=17)
    cagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAAGCCAAT‑GCCGaac                                                                                                                                                                                                                                                                                    >  1:261809/1‑286 (MQ=255)
    cagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCACGCCAAACCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCACGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACATGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑cc                                                                                                                                                                                                                                                                                  <  1:1345885/289‑1 (MQ=255)
          ccGTTGCTGATCCACGTAAAACTGCCGTGGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGaaca                                                                                                                                                                                                                                                                            <  1:311561/289‑1 (MQ=255)
          ccGTTGCTGATCAACGTAAAACTGCCGTTAAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGaaca                                                                                                                                                                                                                                                                            <  1:1349727/289‑1 (MQ=255)
          ccGTGGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCGGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGGACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGaaca                                                                                                                                                                                                                                                                            <  1:723466/289‑1 (MQ=255)
            caggctgtgccgcGTAAAAACACCGTAGAGGAAGCCAGCGCCCGCGGCAAAACGCGCAAGCTGGAACAGCAACAGGCAAAGGCGGACCCAGAACCACAGGGAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAGTGCACGGGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGaacaac                                                                                                                                                                                                                                                                          <  2:1232517/277‑1 (MQ=14)
                    tCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGCAAAGCCGCCCACGAAGCCGCCATTGCGCATGCCAAAGCAAGCAAGCTGGAACACACACATGCTAAA‑GGCGAG‑ACAGAAAAACAgggcca                                                                                                                                                                                                                                                                   >  2:311561/1‑284 (MQ=17)
                        cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGCTCCTCGCAAAGCCGCCGACTACGACGCAATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGCTCCGAGACACGTCGCCGTCGAACGACATAGTGCACTGGCCAAAGCACGCCAGCTGGAACCGCAACCGGCCAAA‑G‑CGAGTCCAAAACAACAGGTTGagactt                                                                                                                                                                                                                                                              >  2:280724/1‑284 (MQ=14)
                                  ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGTGTAACCAAAAGAATAGGTCGATCCGCGCAATGACGCTGTTGAAACCGCTATTTCCCGGGACAAAGCACGCAAGCTTGATAATCAACCGGCCAATCGCTGA‑‑CCAGaacaaacagccccacccccccacacct                                                                                                                                                                                                                                                     >  2:805483/1‑266 (MQ=14)
                                  ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCCGGAACAGCAACAGGCTAATGCGGGACCAGAAGACCAGGTTGATCCGCGCAAAGACGCCGTCGCAGCCGCTATTTCCCGGGCTAAGCCCAACAACGCGGACCAGCAACAGGCTGAA‑GCCGAC‑CCATaagacaaacatgatccgaccaaagcag                                                                                                                                                                                                                                                     >  2:1308238/1‑263 (MQ=14)
                                         agcagctagagccccagcgaacacgacgaaGCTGGAACAGCAACAGGATAATGCGGGACCAGAACAACAGGGCAACCCGCGAAAAGCCGCCGTCGAAGCCGCTAGTGCCCGTGGCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAAGGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGGCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGa                                                                                                                                                                                                                                              <  2:1338317/260‑1 (MQ=17)
                                            agcTACCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCAAATACAGAACCAGAACAACGGGTAGATCCGCGCAAAGCCGCCGTCGAGGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGc                                                                                                                                                                                                                                           <  1:810587/288‑1 (MQ=255)
                                                        cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAA‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCgc                                                                                                                                                                                                                              >  1:633378/1‑288 (MQ=255)
                                                              gggaggcAAGATGGAAAAGCAACAGGGTAGAACGGAAGCGGGACAACAGGGTGAGCGGGCAAAAGGAGACGGGGAAGCAGGAAGTGCCGGCGCCAAAGCGGTCAAGCGGGAAGAGCAACGGGCTAAGGCGGAGCCAGAAGAAGAGGTTGATCCGCGAAAAGCGGACGGCGAAGAGGCTAATGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCGGTA‑CCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCgcgct                                                                                                                                                                                                                           <  2:1267601/281‑2 (MQ=9)
                                                              aGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAA‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCaa                                                                                                                                                                                                                         >  1:1267601/1‑288 (MQ=255)
                                                                     aaGCTGGAACAGCAACAGGATAATGCAGAAACAGAAAAACAGGTTGATCCGCGCAAAGCCGGCGGCGAGGCAGCTATTGCCCGGGAAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGGCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCa                                                                                                                                                                                                                 <  1:1212435/289‑1 (MQ=17)
                                                                           gAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCCAAT‑GCCGAG‑CCATAAGAACAGGTCGATCCACGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACggg                                                                                                                                                                                                           >  1:1050931/1‑289 (MQ=255)
                                                                           gAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCGCTTGAAGCCGCTATTGCCCCAGCCAAAGCGCGCAAAgggg                                                                                                                                                                                                           >  1:1009939/1‑289 (MQ=255)
                                                                                           aTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCGTGCCAAAGCACACAAACAGGAACAGCAACAGGCTAAT‑GACGAG‑CCAGAAAAACAATTCAAACTGCGCAACTGCCCCGCCTAAGCCGCTATTGCCCCAGCCAAAGCCCACCACGGGGAAAAGCAAAAGGCTaa                                                                                                                                                                                           >  2:1036823/1‑289 (MQ=14)
                                                                                                 cacccgaaccacgggtgaaccggcgcAAACACGCCGTTCAGGCCGCTATTACCCGGGCCAAAGCAGGCAGGCGGGAACAGCAACAGGCAAATACAGAAGCAGCACCCCAGGTCGATCCTCGCAAAGCGGCCGTCGAAGACGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                                                                                                                                                                                       <  2:920172/265‑1 (MQ=14)
                                                                                                 aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCCGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTTGACCCGCCCCAAGCCGCCGTCCAAGCAGCTCTTGCACGCGCCAAACCCACCAAAACGGAACAGCAACAGGCTAAAGccta                                                                                                                                                                                     >  2:641660/1‑286 (MQ=11)
                                                                                                   ccAGAACAAGAGGTCGATCCGCGCAAAGCCGACGTCGAAGCCGCTATTGCCCGGGCCAAAGCGGGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc                                                                                                                                                                                   <  1:280724/289‑1 (MQ=255)
                                                                                                           acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGCACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAACCCGCTATTGACCGAGCCACAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaca                                                                                                                                                                            >  1:1136182/1‑286 (MQ=255)
                                                                                                               gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCCGGCACAGCAACAGGCTAAT‑GCGGAG‑CCAGAAGAACAGGTCGAACAGCGCAAAGCCGCCTACGACGCCGCCATTTCCAGAGCCCAAGCCAGCAAACCGGAACAGCAAACGGATACTGCGGAGTCAGAAGAACAgg                                                                                                                                                                       >  2:621682/1‑289 (MQ=14)
                                                                                                                 cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATTCGCGCAAAGCCCCCGTCGAAGCCGCTATTCCCCGACCCAAAGCGCGCAAACGGGAACAGCAACCGGCCAATGCTGCGGCAGAAGAACAGGtt                                                                                                                                                                     >  1:791465/1‑289 (MQ=255)
                                                                                                                       gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGGCGAAGCAGCAATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCAGAGCAACGCCGCCGGCGAAGCCGCCATTGCAACACGCAAAGCACGCAAACGGGAACAGCAACAAGCTAAATCGGAGCCGGAAGAACAGGTCGAGcc                                                                                                                                                                >  2:1365798/1‑288 (MQ=14)
                                                                                                                          cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGAGGACACCGAAGAACAGAttaaacagccc                                                                                                                                                            >  1:1359432/1‑280 (MQ=255)
                                                                                                                                                    cccGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCACAGCGCGCAAACGGGAACAGCAACCGGCCAATGCGGAGCCAGAAGAACAGGCTGATCCGCGCAAAGCTCCCGTCCAAACGGCTAtttc                                                                                                                                  >  1:1202375/1‑287 (MQ=255)
                                                                                                                                                    cccGGGCCAAAGCGCGCAAGCAGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAGAGGTCGCTCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGc                                                                                                                                  <  1:901332/289‑1 (MQ=255)
                                                                                                                                                     ccGTGCCAAAGCAGGCAAGCGGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCa                                                                                                                                 <  1:1403932/289‑1 (MQ=255)
                                                                                                                                                        tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGTAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAA‑CCAGAACACCACGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCCGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCTCAGCGGCTATTGCAcg                                                                                                                               >  1:1345640/1‑288 (MQ=255)
                                                                                                                                                        tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCTCGCAAAAATGCCGTCGACGGGACTATTGCAcga                                                                                                                              >  1:1036047/1‑288 (MQ=255)
                                                                                                                                                        tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGAAAGCTGGAACAGCAACAGGCTCAT‑GCGCAG‑CTAGAACACCACGGCCAACAGCGCAAAGGAGACGTTGAAGCCGCGATTGCACGAACCAACGCACGCAACACGGAACAGCAAACGGACAATGCGGCACTAGAACAAAAGGTATAGCCGAGCaaaagtatcggctaacgacagattggacg                                                                                                                               >  2:1152042/1‑262 (MQ=2)
                                                                                                                                                         gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCCAAGCACGCAAACGGGCACACCAACAGGCTAAT‑GCCGAG‑CCAGAAGAACAGGTTGATACACGCAAAGCCGCACTTGAAGCGGCTCTTGCCAGAGCCAAAGCACCCAAACGCGAAAAGCCACAGGATAATGCGGAGCAAGAAGACAAGGTAGAACCGCCCAAAggaacctacgccgccgccatttccagcc                                                                                                                             >  2:654704/1‑262 (MQ=2)
                                                                                                                                                              aGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAA‑GCCGAG‑CCCGAACAACAGGTCGAACCGCGCAAAGCCGCCGTCTCCGACGCCATTGCCCGGGCCAAAGCCCACAAGCTGGCACAGCAACCGGCTAATGCGGCACCAAAAGAACAGGCACATCCGCCAAAAGCTGcacacacagctgccatggtccgggccaa                                                                                                                         >  2:994857/1‑261 (MQ=11)
                                                                                                                                                                  cgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAAGAACAGGGTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGAGCCAAAGCGAGCAAGCGGGAACAGCAACCGGCTAATGCGGACCCCGCAGAACACGTTGATCCGCGCAAAGCGGCCGGCGGAGCGGCTAATGCAcgctgcaacacca                                                                                                                    >  2:522702/1‑279 (MQ=14)
                                                                                                                                                                  cgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTTGATCCGCGCAAAGCCGCCGTGGAAGCGGCTATTGCACGCGCCAAAGCGCGCAAACGGGAACAGCAAACGGCTAATGCCGAACCCAAAAAACAGGGTGAACCGCGCAAAGCCGCCGTCGCAGCGGCTAAGTCCCGCGCCAAGGccc                                                                                                                    >  2:101687/1‑287 (MQ=14)
                                                                                                                                                                         tGGAACAGCAAAAGGGTACTGCGGAACCAGAACACCAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACCCAAGCTGGAAGAGCAACAGGCTAAT‑GCCGAG‑CCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc                                                                                                              <  1:1212647/288‑1 (MQ=255)
                                                                                                                                                                          ggAACAGCAACACGCTAATGCGGAACCAGAAAAACAGGGCGACCAGCGCAAAGCCGCCGTCGAAGCCGCTATTGGCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                                                                                             <  1:192541/288‑1 (MQ=255)
                                                                                                                                                                             aCAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCGCAAGCACGAAAGCGGGa                                                                                                          >  1:1296871/1‑288 (MQ=255)
                                                                                                                                                                             aCAGCAACAGGCGAATGCGGACCCAGAAGGCCAGGTCGTACCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACCGGACGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAGGCTGGaa                                                                                                         <  1:23049/289‑1 (MQ=255)
                                                                                                                                                                              cAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAATCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc                                                                                                        <  1:1152042/289‑1 (MQ=255)
                                                                                                                                                                               aGCCACAGGGTAATGGGGAACGAGGAGGACGGGTGGACGCGCGCAAAACCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGaa                                                                                                         <  1:805483/287‑1 (MQ=17)
                                                                                                                                                                                 cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCGGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGGGCCAAAGCCCGCAAACGGGAACAGCAACCGGCCAATGCCGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTTCCCGCGCCAAAGCCCCCAACCTCGCACAGc                                                                                                     >  2:611981/1‑289 (MQ=14)
                                                                                                                                                                                   aCAGGCTAATGCGGAACCAGAAGAACAGGTCGACCCGCGCAAGGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                   <  1:641660/289‑1 (MQ=255)
                                                                                                                                                                                     aGGCAAATGAGGAACCAGAAAGCCAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa                                                                                                 <  1:1173208/289‑1 (MQ=255)
                                                                                                                                                                                       gacagtGCGGAACCGGACGACCAGTTCGATCCCAGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAg                                                                                                <  1:924559/283‑1 (MQ=255)
                                                                                                                                                                                         tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGTCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCCTAAAGCGTCCGTTCACACGGCCATTGCCCGGGACAAACGACGCCAGcccgacgccacacatgg                                                                                              >  2:1408204/1‑272 (MQ=14)
                                                                                                                                                                                           aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCCAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCa                                                                                                                                 >  1:1525504/1‑251 (MQ=255)
                                                                                                                                                                                           aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCaa                                                                                                                                                                                                   >  2:281368/1‑185 (MQ=255)
                                                                                                                                                                                           aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCaa                                                                                                                                                                                                   <  1:281368/185‑1 (MQ=255)
                                                                                                                                                                                                 aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTGATGCGGAGCCAGAAGAACAGGTTGACACGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCTCCAAAGCCCGCAAGCTGGAACAGTAACAGGCAAATGCGGt                                                                                     >  2:385022/1‑289 (MQ=255)
                                                                                                                                                                                                 aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                                                                                                                                                            <  1:925963/202‑1 (MQ=255)
                                                                                                                                                                                                 aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                                                                                                                                                            >  2:925963/1‑202 (MQ=255)
                                                                                                                                                                                                 aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTCTTGCACGCGCGAAAGCACGCAAGCTGGAACAGCAATAGGCGAATGCgct                                                                                     >  1:994419/1‑287 (MQ=255)
                                                                                                                                                                                                   ccAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc                                                                                   <  1:1365798/289‑1 (MQ=255)
                                                                                                                                                                                                     aaaagaaCAGGTCGATCCACGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc                                                                                   <  1:585258/285‑1 (MQ=255)
                                                                                                                                                                                                          aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaaga                                                                            <  1:1563530/289‑1 (MQ=255)
                                                                                                                                                                                                           aCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCAGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCCCGCAAGCCGGAACAGCAACCGGCTTATGCGGTAGCaaaaga                                                                            >  2:732603/1‑288 (MQ=255)
                                                                                                                                                                                                                    tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCACAGCTGCCGTCGACGCGGCTATTGCCCGCGCCAAATCACGCAACCCCGAACAACAAACGGCGCATGAGGTCCCaaaaacaaagctata                                                                   >  2:1441506/1‑277 (MQ=14)
                                                                                                                                                                                                                    tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTTGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAACGCCGCCGTCGACGCGGCTATTGCCCGCGCCAAACCACACAAGATCGAACAACCACAGGGTAAtaccgaagcaccaaaaacactcag                                                                   >  2:105094/1‑265 (MQ=14)
                                                                                                                                                                                                                                  ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGAACCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACCGCAACCGGCTAATGCGGATGCAGAAGAACAGGTTGATCCGCGCAAGGCAGCCGTCGAAGCGGCTATTGCACGCGCCCAAGCACGCAAGCTGGAACAGGAACAGGCTACAGCGGCACCACAACCACCGGTAAGTGCGCGCAAACCgg                                                     >  2:1453294/1‑288 (MQ=17)
                                                                                                                                                                                                                                   cgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAAT‑GCGGAA‑CCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc                                                                                              >  1:1039333/1‑246 (MQ=255)
                                                                                                                                                                                                                                         aGCCGCTATGCCCCGAGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGc                                              <  1:1058037/288‑1 (MQ=255)
                                                                                                                                                                                                                                            cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCcg                                            <  1:611981/287‑1 (MQ=255)
                                                                                                                                                                                                                                               tATTGCCCGTGCCAAAGCACGCGAGCTGGAAGATCAACAGGTTAAT‑GCGGAG‑GCAGGACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCt                                       <  1:593664/289‑1 (MQ=255)
                                                                                                                                                                                                                                               tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCt                                       >  1:56679/1‑289 (MQ=255)
                                                                                                                                                                                                                                               tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCCGGAACAGCCACAGGCTAAACCGGTCCCAGAAGAACAGGTTGAACCGCGCAAACCCGCAGGTGCCCCGGc                                        >  2:867690/1‑288 (MQ=17)
                                                                                                                                                                                                                                                      cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCAGAGCCAAGTCGCCGTCCAGGCCGCGATTGCCCGAGCCAAAGAGCGCACACGGGAACAGCAACCGGATAATGAGGGGCCAGGCGAACAGGTTGATCATCTCCAATCTGCCGTCTACGCGGCTATCGCACGCGcc                                                                                                                           >  2:964074/1‑198 (MQ=25)
                                                                                                                                                                                                                                                       gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCCGGAACAGCAAACGGCTAATAAGGTACCAGAAGAACAGGTTGATCCGCGCAAAGAGGCCGATTCCGCGGTCATTAccc                                >  2:497434/1‑288 (MQ=17)
                                                                                                                                                                                                                                                        tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCcg                               >  1:1575913/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATACGGTACCCGAAGAACAGGTTGATCCGCGCAAAACGGCAGTTGCCGCGGCGATTGCCcga                              >  1:1263208/1‑287 (MQ=255)
                                                                                                                                                                                                                                                         gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTTCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCcga                              >  1:1522142/1‑287 (MQ=255)
                                                                                                                                                                                                                                                         gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCcgc                              >  1:541577/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           cAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt                           <  1:522702/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           acaaggagcaagactgaaccgcgaaCAGCCGAAT‑GGCGGG‑CGACAACAACAGGTCGAGCGCCGCAGAGCGGTCGTCGAAGCCGCTATTGCCCCAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAGAAACAGGTCGACCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt                           <  2:541577/266‑1 (MQ=17)
                                                                                                                                                                                                                                                            caaGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt                           <  1:628098/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAgg                       >  1:143353/1‑280 (MQ=255)
                                                                                                                                                                                                                                                                           gAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTTCCGCGGCTATTGACCGCGCCCAGGCCAAAAAAgcc            >  1:636313/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           gAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAccc            >  1:1041919/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            aaCAGAAACAGGAGAAG‑GCAGAG‑CCAGAACACCAGGTCGACCCGCGCAAACCCGCCGTAGAGGCCGCTATTGACCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGATAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGAAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAgccg           <  1:93033/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTTATCCGCGCAAAGCTACCGTCAAAGAGGACATTGCACGCGCCACAGCACGCAAGCAGGAACAGCAACCGGCTAATGCGTTACCAGAAACAAAGGTTGATCCGCCCAACGCGCCAGTATCCACGGACATATCCCGCAACCAGCCCAAAAAAcccgacacc      >  2:1291123/1‑283 (MQ=17)
                                                                                                                                                                                                                                                                                   aCAGGCTAAT‑GCCGAG‑CCAGACCAAGAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCcagcag   <  1:1160851/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   aCAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGCACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg                                                                                                                   >  2:141519/1‑177 (MQ=255)
                                                                                                                                                                                                                                                                                   aCAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg                                                                                                                   <  1:141519/177‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   aCAGGCTAAG‑GCCGGG‑CCAGAACACCAGGTCGACCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCcagcag   <  1:1308238/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    ccggCTAAT‑GCCGAG‑CCAGAGCAACAGGCGGATCCGCGCAAGGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGa  <  2:56679/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        cTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGa  <  1:1441506/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           aT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa                                                                                                                <  2:1037324/172‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           aT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCaa                                                                                                                >  1:1037324/1‑172 (MQ=255)
                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                      
GACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT‑GCCGAG‑CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGA  >  NC_000913/1708557‑1709121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A