Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F50 I3 R1 283 58.3 1819865 98.8% 1798026 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,192,714 A→G C354R (TGC→CGC)  mnmA ← tRNA(Gln,Lys,Glu) U34 2‑thiouridylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,192,7140AG100.0% 218.0 / NA 60C354R (TGC→CGC) mnmAtRNA(Gln,Lys,Glu) U34 2‑thiouridylase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (37/23);  total (37/23)

CCAGGCGTGCCGACTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCACACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTACCGTGC  >  NC_000913/1192568‑1192857
                                                                                                                                                  |                                                                                                                                               
ccAGGCGTGCCGACTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACt                                                                                                                                             <  1:7153/151‑1 (MQ=255)
 cAGGCGTGCCGACTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACtt                                                                                                                                            <  1:386810/151‑1 (MQ=255)
           gACTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTtata                                                                                                                                  <  1:709349/151‑1 (MQ=255)
           gACTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTtat                                                                                                                                   >  1:551340/1‑150 (MQ=255)
            aCTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATag                                                                                                                                 <  1:507784/151‑1 (MQ=255)
                 cAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGAc                                                                                                                            >  1:512353/1‑151 (MQ=255)
                   aaTACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACgg                                                                                                                          <  2:786994/151‑1 (MQ=255)
                   aaTACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACgg                                                                                                                          <  2:773880/151‑1 (MQ=255)
                   aaTACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACgg                                                                                                                          <  1:468472/151‑1 (MQ=255)
                     tACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGc                                                                                                                         >  1:321107/1‑150 (MQ=255)
                        cGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGAc                                                                                                                     >  1:86383/1‑151 (MQ=255)
                          gCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTg                                                                                                                   <  2:860386/151‑1 (MQ=255)
                               ggCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCg                                                                                                              >  1:794762/1‑151 (MQ=255)
                                gCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCgg                                                                                                             >  2:860709/1‑151 (MQ=255)
                                 cGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGc                                                                                                            >  2:393492/1‑151 (MQ=255)
                                  gAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCg                                                                                                           >  2:502609/1‑151 (MQ=255)
                                   aGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGt                                                                                                          >  2:106355/1‑151 (MQ=255)
                                         aTGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCAcggc                                                                                                    >  2:339054/1‑151 (MQ=255)
                                          tGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCAcggcg                                                                                                   >  1:112924/1‑151 (MQ=255)
                                                aGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAAcc                                                                                             >  1:630141/1‑151 (MQ=255)
                                                   aaTTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGt                                                                                          <  1:787094/151‑1 (MQ=255)
                                                      tCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTc                                                                                        <  1:682421/150‑1 (MQ=255)
                                                              aCGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAAt                                                                               <  2:745126/151‑1 (MQ=255)
                                                                  tCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCAc                                                                            <  1:67562/150‑1 (MQ=255)
                                                                  tCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCAc                                                                            >  2:650203/1‑150 (MQ=255)
                                                                      tGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAAGCGCACTTCACCGTTATAGAAGACGCCCGACTGGCCCGGCGTCACGGCGGCAAACGGGTCCTGGAAAATCACTTCa                                                                        >  2:479362/1‑150 (MQ=255)
                                                                       gCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCaa                                                                       <  1:393518/150‑1 (MQ=255)
                                                                          tCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCg                                                                   >  2:413014/1‑151 (MQ=255)
                                                                           ccTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCg                                                                   >  2:107117/1‑150 (MQ=255)
                                                                            cTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGat                                                                 >  1:80996/1‑151 (MQ=255)
                                                                               gTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGatcat                                                              >  1:25405/1‑151 (MQ=255)
                                                                               gTTCTAAGTAAAGATAATAATCAGACCCGCAGCGGCAGACGCTGCTCAATAATACCGCAACCGACGCGCACTTCACCGTTATAGAAGAAGGCAGACTAGCCAGTCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTTAATGCGatc                                                                >  2:505056/1‑149 (MQ=255)
                                                                                 tttAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCg                                                            >  2:855233/1‑151 (MQ=255)
                                                                                    aaGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTcc                                                         <  1:778903/151‑1 (MQ=255)
                                                                                        aaaGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAgcg                                                     >  1:686815/1‑151 (MQ=255)
                                                                                          aGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGcc                                                   >  2:115415/1‑151 (MQ=255)
                                                                                             taataaTCAGACCGGCAGCGGCAGACGCTGCTAAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCt                                                  >  2:713290/1‑149 (MQ=255)
                                                                                               ataatCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGAc                                              >  2:375705/1‑151 (MQ=255)
                                                                                                 aatCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACgg                                            >  2:308683/1‑151 (MQ=255)
                                                                                                 aatCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACg                                             <  1:339080/150‑1 (MQ=255)
                                                                                                  atCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGt                                           >  1:156562/1‑151 (MQ=255)
                                                                                                    cAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTg                                          <  2:586047/150‑1 (MQ=255)
                                                                                                    cAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGc                                         >  1:380396/1‑151 (MQ=255)
                                                                                                        ccGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAgg                                     >  1:878006/1‑151 (MQ=255)
                                                                                                         cggcagcggcagACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAggg                                    >  2:705566/1‑151 (MQ=255)
                                                                                                              gcggcagACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATc                               >  2:352747/1‑151 (MQ=255)
                                                                                                                   agACGCTGCTCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCt                          <  2:112902/151‑1 (MQ=255)
                                                                                                                         tgctCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGAt                    >  1:249476/1‑151 (MQ=255)
                                                                                                                          gctCAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGAt                    <  2:709533/150‑1 (MQ=255)
                                                                                                                             cAATAATACCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGc                 <  1:104028/150‑1 (MQ=255)
                                                                                                                                 aataCCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGtt            <  1:443079/151‑1 (MQ=255)
                                                                                                                                 aataCCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGtt            >  1:475197/1‑151 (MQ=255)
                                                                                                                                 aataCCGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGt             <  2:163968/150‑1 (MQ=255)
                                                                                                                                      cGCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTAc       >  2:187129/1‑151 (MQ=255)
                                                                                                                                       gCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTAcc      >  2:524658/1‑151 (MQ=255)
                                                                                                                                       gCCACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTAcc      >  1:890801/1‑151 (MQ=255)
                                                                                                                                         cACCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTACCGt    <  2:512303/151‑1 (MQ=255)
                                                                                                                                          aCCGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTACCGTg   >  2:453565/1‑151 (MQ=255)
                                                                                                                                           ccGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTACCGTg   <  2:4952/150‑1 (MQ=255)
                                                                                                                                           ccGAGGCGCACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTACCGTGc  >  2:843398/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
CCAGGCGTGCCGACTGACAAATACCGGCCAGGGCGAGGGTGATGTCATAGTAATTCTTTGCCACGTTCACTGCTTCCTTGTTTTAAGTAAAGATAATAATCAGACCGGCAGCGGCAGACGCTGCTCAATAATACCGCCACCGAGGCACACTTCACCGTTATAGAAGACGGCAGACTGGCCCGGCGTCACGGCGGCAACCGGTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGACGGTGCAAGGGATATCGGTCTGGCGATAGCGGGTTTTTACCGTGC  >  NC_000913/1192568‑1192857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A