Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I1 R1 163 55.0 1534755 98.6% 1513268 150.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,399,151 Δ1 bp coding (1740/1848 nt) mutL → methyl‑directed mismatch repair protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,399,1510G.100.0% 323.2 / NA 66coding (1740/1848 nt)mutLmethyl‑directed mismatch repair protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (41/25);  total (41/25)

AACAAAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCTGCTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGATTTTTTT  >  NC_000913/4399006‑4399295
                                                                                                                                                 |                                                                                                                                                
aacaaAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCg                                                                                                                                            >  2:633020/1‑151 (MQ=255)
  caaAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGa                                                                                                                                          <  2:509533/151‑1 (MQ=255)
        ttACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTgg                                                                                                                                     >  2:336286/1‑150 (MQ=255)
         tACCAATCTTGGTTCCTGAACTGATAGGCTACCTGGCGATGCAGTCAGAATTCGAACCTCGCAATATTGCGCAGTGGATAGCACGAAATCTGATAAGCGAACATGCGCAGCGGTCAATGGCACAGGCCATAACTCT‑CTGGCGGAc                                                                                                                                         >  2:509679/1‑145 (MQ=255)
         tACCAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTg                                                                                                                                      >  2:759633/1‑148 (MQ=255)
          aCAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGTAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGAGGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCGT‑CTGGCGGACGTGGaa                                                                                                                                   <  2:727359/150‑1 (MQ=255)
             aaTCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGt                                                                                                                               >  1:489031/1‑151 (MQ=255)
               tCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGtt                                                                                                                              >  2:276083/1‑150 (MQ=255)
                  tGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGtt                                                                                                                              <  1:327530/147‑1 (MQ=255)
                  tGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATg                                                                                                                           <  2:216363/150‑1 (MQ=255)
                    aTTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTcc                                                                                                                        <  1:161592/151‑1 (MQ=255)
                     ttCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCg                                                                                                                       >  1:426569/1‑151 (MQ=255)
                          gAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACt                                                                                                                  >  1:447030/1‑151 (MQ=255)
                               gATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGa                                                                                                             <  2:673336/151‑1 (MQ=255)
                                aTAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGa                                                                                                             >  2:554972/1‑150 (MQ=255)
                                  aGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGaaa                                                                                                           >  2:318525/1‑150 (MQ=255)
                                   ggCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATGACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACGTGTGaaaa                                                                                                          <  1:296702/150‑1 (MQ=255)
                                    gCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTACGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAAcg                                                                                                        <  1:218211/151‑1 (MQ=255)
                                      tACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAAcgcc                                                                                                      >  2:350396/1‑151 (MQ=255)
                                       aCCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAAcgccg                                                                                                     <  1:24851/151‑1 (MQ=255)
                                         cTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACgccgcc                                                                                                   >  1:751457/1‑151 (MQ=255)
                                          tGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGccgccg                                                                                                  >  1:520784/1‑151 (MQ=255)
                                           ggCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGccgccg                                                                                                  <  1:472216/150‑1 (MQ=255)
                                           ggCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCgg                                                                                                 >  2:707653/1‑151 (MQ=255)
                                           ggCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCgg                                                                                                 >  1:528383/1‑151 (MQ=255)
                                              gAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGggtg                                                                                              >  2:687225/1‑151 (MQ=255)
                                              gAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGggtg                                                                                              >  2:99702/1‑151 (MQ=255)
                                               aaGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGggtgg                                                                                             <  2:109481/151‑1 (MQ=255)
                                                       cGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTAc                                                                                     >  1:740988/1‑151 (MQ=255)
                                                        gTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTAc                                                                                     >  1:98148/1‑150 (MQ=255)
                                                          aTTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACaa                                                                                   <  1:501345/150‑1 (MQ=255)
                                                            tCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCt                                                                                >  1:263307/1‑151 (MQ=255)
                                                               aaCCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGtt                                                                             >  1:115524/1‑151 (MQ=255)
                                                                     gCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGAttt                                                                        >  2:761460/1‑150 (MQ=255)
                                                                     gCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGAttt                                                                        >  1:335168/1‑150 (MQ=255)
                                                                        atatTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACAt                                                                    <  1:765772/151‑1 (MQ=255)
                                                                          atTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATc                                                                   <  2:495749/150‑1 (MQ=255)
                                                                             gcgcAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCgg                                                                <  1:637629/150‑1 (MQ=255)
                                                                              cgcAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCg                                                              >  1:26191/1‑151 (MQ=255)
                                                                                cAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGAt                                                            <  1:382619/151‑1 (MQ=255)
                                                                                  gTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATa                                                           >  1:522028/1‑150 (MQ=255)
                                                                                     gATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAg                                                       <  1:358545/151‑1 (MQ=255)
                                                                                      aTTGCACGAAAACTGATAAGCGAACATGCGAAGAGGTCAATGGCACAGGCCATAAACCT‑CTGGCGGACGTGGTAAGGGTATGTCCGAAACTTGTGAAATCGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCAGGCGATaaaa                                                        >  2:718209/1‑149 (MQ=255)
                                                                                         gCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCt                                                   <  2:124598/151‑1 (MQ=255)
                                                                                          cACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTg                                                  <  2:524723/151‑1 (MQ=255)
                                                                                           aCGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTg                                                  >  2:684605/1‑150 (MQ=255)
                                                                                            cGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGa                                                 >  2:586269/1‑150 (MQ=255)
                                                                                                   tgatgaGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATg                                           >  1:2131/1‑149 (MQ=255)
                                                                                                   tgatgaGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATg                                           >  2:129927/1‑149 (MQ=255)
                                                                                                       gaGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGa                                      <  2:281730/150‑1 (MQ=255)
                                                                                                          cGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATc                                  <  1:399306/151‑1 (MQ=255)
                                                                                                             aCATGCGCAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGt                               <  1:276094/151‑1 (MQ=255)
                                                                                                                 gcgcAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAg                            <  1:644184/150‑1 (MQ=255)
                                                                                                                   gcAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCg                         <  2:195059/151‑1 (MQ=255)
                                                                                                                    cAGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCg                         >  2:737339/1‑150 (MQ=255)
                                                                                                                     aGTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCg                         >  2:117795/1‑149 (MQ=255)
                                                                                                                      gTGGTCAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAAGGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAg                       <  2:447009/150‑1 (MQ=255)
                                                                                                                           cAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATTTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAgcctgcc                 >  1:225307/1‑151 (MQ=255)
                                                                                                                           cAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAgcctgcc                 >  2:599671/1‑151 (MQ=255)
                                                                                                                           cAATGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAgcctgcc                 >  2:523190/1‑151 (MQ=255)
                                                                                                                              tGGCACAGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTa               >  1:445351/1‑150 (MQ=255)
                                                                                                                                 cacaGGCCATAACCCT‑CTGGCGGATGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTAAgg            >  2:686026/1‑150 (MQ=255)
                                                                                                                                   caGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGTTATCAGTATGGCGAGCCTGCCTAAGGc           >  2:140368/1‑149 (MQ=255)
                                                                                                                                    aGGCCATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGAt        >  1:509308/1‑151 (MQ=255)
                                                                                                                                       ccATAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGAtttt     >  2:380897/1‑151 (MQ=255)
                                                                                                                                          tAACCCT‑CTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGAttttttt  >  2:493271/1‑151 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
AACAAAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCTGCTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGATTTTTTT  >  NC_000913/4399006‑4399295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A