Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F167 I0 R1 217 202.7 4541848 95.9% 4355632 211.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,906,975 C→G 100% D450H (GAC→CAC)  pyrG ← CTP synthase (glutamine hydrolyzing)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077792,906,9750CG100.0% 546.8 / ‑6.7 162D450H (GAC→CAC) pyrGCTP synthase (glutamine hydrolyzing)
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (88/72);  minor base A (0/1);  total (88/74)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 168 total aligned reads displayed.

GCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTCAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTG  >  NC_007779/2906741‑2907210
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                           
gCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaacc                                                                                                                                                                                                                                         >  2:462403/1‑239 (MQ=255)
             aCGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCActgct                                                                                                                                                                                                                            <  1:1659327/239‑1 (MQ=255)
                     tAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCg                                                                                                                                                                                                                    >  2:1214990/1‑239 (MQ=255)
                      aGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAATCAACTGGCACTGCTGTGCGCCg                                                                                                                                                                                                                    <  1:1727899/238‑1 (MQ=255)
                         aGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCgag                                                                                                                                                                                                                  <  2:1312452/237‑1 (MQ=255)
                            aaccTCGGGATGGAACTGGAAAGCCACGACCCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGCCCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTGGTAACGGTGACGAGGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCa                                                                                                                                                                                                             <  2:1359221/236‑1 (MQ=255)
                            aaaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCa                                                                                                                                                                                                             <  2:218228/239‑1 (MQ=255)
                             aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGCACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                            >  1:1374801/1‑239 (MQ=255)
                             aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                            >  1:271748/1‑239 (MQ=255)
                                  cGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaaccaa                                                                                                                                                                                                                                       <  2:541158/207‑1 (MQ=255)
                                  cGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCActgct                                                                                                                                                                                                                            <  2:892786/218‑1 (MQ=255)
                                  cGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCActgct                                                                                                                                                                                                                            >  1:892786/1‑218 (MQ=255)
                                  cGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTa                                                                                                                                                                                                        >  1:1508574/1‑238 (MQ=255)
                                      tGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCACCTGGCACTGCTGTGCGCCGAGACGCATGGTAccgc                                                                                                                                                                                                    <  1:2012693/238‑1 (MQ=255)
                                          aCTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGGGCGCCGAGACGCATGGTACCGCGgaga                                                                                                                                                                                               >  1:1984834/1‑239 (MQ=255)
                                                   ccACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCa                                                                                                                                                                                                                                 <  2:709416/196‑1 (MQ=255)
                                                   ccACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGctct                                                                                                                                                                                        >  1:141999/1‑237 (MQ=255)
                                                    cACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCCCTGCTGTGCGCCGAGACGCAGGGTACCGCCGAGATCGCtcttc                                                                                                                                                                                      <  1:359496/238‑1 (MQ=255)
                                                        aaCCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCt                                                                                                                                                                                 >  2:765984/1‑239 (MQ=255)
                                                         aCCGCGGGTGTTTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCACCGCGCAGACTTGCATTTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCTTTGTACAGCTGGCGAACCAGGCTATCGTGAACCACCTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTa                                                                                                                                                                                <  2:1114996/239‑1 (MQ=255)
                                                         aCCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCt                                                                                                                                                                                 <  1:1016560/238‑1 (MQ=255)
                                                          cacagggTGATTCGGAACTTCGATGATCTCGACCAATTGTTCACCCCCGCAACGGCCCGCACCGCGCTGTCCTGCATCTTCAATCTGTTTCACCAGCATGTTGTTGACTTCGTACCGGTGACGATGACGCTCAACAATTGGCGGCGCCTTGTACAGCTGGCGAACCAGGTTATCGTGAACTAACTGGCCCTCCTGTCGGCCGAGACGCAGGGTTCCGCCGAGATCGCTCTTCTCGCTAc                                                                                                                                                                               <  2:430638/235‑1 (MQ=255)
                                                             cGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCCATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTAGAACTGCTTAGCGCCGAGACCCATGGTACCGCCGAAGTCGCTCTTCTCGCTACGa                                                                                                                                                                             >  2:1103393/1‑238 (MQ=255)
                                                                   aTTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCa                                                                                                                                                                       >  2:1750426/1‑238 (MQ=255)
                                                                     tCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACg                                                                                                                                                                    <  1:1750426/239‑1 (MQ=255)
                                                                         aaCTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTg                                                                                                                                                                 >  2:730752/1‑238 (MQ=255)
                                                                         aaCTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTg                                                                                                                                                                 <  2:271748/238‑1 (MQ=255)
                                                                          aCTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGcc                                                                                                                                                               >  1:2038609/1‑239 (MQ=255)
                                                                                      tcGCCCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACCTCAACGTTGCCGTTTTCATcgcg                                                                                                                                                   <  1:765984/239‑1 (MQ=255)
                                                                                       cGACCAACTGATCACCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACGGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCgcgc                                                                                                                                                  <  1:470415/239‑1 (MQ=255)
                                                                                        gACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACtt                                                                                                                                                                         <  1:100484/215‑1 (MQ=255)
                                                                                        gACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACtt                                                                                                                                                                         >  2:100484/1‑215 (MQ=255)
                                                                                           cAACTGACATTCCCCGGACCGCCCCGCAACGCCCAGCCCTGCATTTTCAATCTGTTTCAACAGCATGTTGTTGTCTTCGTAACGGTGACGATGACGCTCAACATTTGCCGGCGCATTGTACAGCTGGGGACCCGGGTTATCGGGACCCACCTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACt                                                                                                                                              <  2:141999/239‑1 (MQ=255)
                                                                                             aCTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCg                                                                                                                                            >  1:1249799/1‑239 (MQ=255)
                                                                                             aCTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCg                                                                                                                                            >  1:1051519/1‑239 (MQ=255)
                                                                                                      ccccGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAAt                                                                                                                                       >  1:1329832/1‑235 (MQ=255)
                                                                                                         cGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAgcgc                                                                                                                                 >  2:1320428/1‑238 (MQ=255)
                                                                                                         cGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAgcgc                                                                                                                                 >  2:2234649/1‑238 (MQ=255)
                                                                                                          ggAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACTCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCca                                                                                                                               <  1:1746347/239‑1 (MQ=255)
                                                                                                             aCGGCCCGCACCGCGAAGACCTGCATCTTAAATCTGTTTCAACAGAATGTTGTTGACTGCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGAATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCcaca                                                                                                                             <  1:71161/238‑1 (MQ=255)
                                                                                                              cGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCACCTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAAc                                                                                                                           <  1:842821/239‑1 (MQ=255)
                                                                                                                 cccGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATTTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCg                                                                                                                         <  1:1320428/238‑1 (MQ=255)
                                                                                                                 cccGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCgg                                                                                                                        >  1:939246/1‑239 (MQ=255)
                                                                                                                  ccGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGACCCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCggg                                                                                                                       <  1:1246864/239‑1 (MQ=255)
                                                                                                                  ccGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCggg                                                                                                                       <  1:1300246/239‑1 (MQ=255)
                                                                                                                  ccGCAACGCCCAGCCCGGCATCTTAAATCTGTTTCAACAGCAGGTTGTTGACTTCGTACCGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCGGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCggg                                                                                                                       <  2:939246/239‑1 (MQ=255)
                                                                                                                        ggcgcCGACCTGCTTCTTCAATTGTTTTAAACAGCATGTTGTTGACTTCGTAACGGTGACGATGCCGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCTTGTTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTa                                                                                                                 <  2:386147/238‑1 (MQ=255)
                                                                                                                                         tCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAAtt                                                                                                 >  1:1804048/1‑238 (MQ=255)
                                                                                                                                         tCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAAtt                                                                                                 >  2:2180009/1‑238 (MQ=255)
                                                                                                                                         tCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAAtt                                                                                                 >  2:2030795/1‑238 (MQ=255)
                                                                                                                                           aaTCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGt                                                                                                             >  1:1237956/1‑224 (MQ=255)
                                                                                                                                           aaTCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCg                                                                                              >  1:310466/1‑239 (MQ=255)
                                                                                                                                             tCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCg                                                                                                                         <  1:215845/210‑1 (MQ=255)
                                                                                                                                             tCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCg                                                                                                                         >  2:215845/1‑210 (MQ=255)
                                                                                                                                                 tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGt                                                                                        <  1:1962606/239‑1 (MQ=255)
                                                                                                                                                               tgttgACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAATCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATg                                                                          >  2:1725521/1‑239 (MQ=255)
                                                                                                                                                                      ttCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCg                                                                                                                         >  1:237216/1‑185 (MQ=255)
                                                                                                                                                                      ttCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCa                                                                    >  2:1516877/1‑238 (MQ=255)
                                                                                                                                                                        cGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAAc                                                                                                                           <  2:1625990/181‑1 (MQ=255)
                                                                                                                                                                           aaCGGTGGCGATGACGCACAACAATTGGCGGCACATGGTACAGCTGGCGAACCGGGCTCTCGGGACCCAACTGGCACTGCTGTGCCCCGAGACGCATGGAACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATgg                                                              <  2:123852/239‑1 (MQ=255)
                                                                                                                                                                                  aCGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGt                                                       >  1:1673814/1‑239 (MQ=255)
                                                                                                                                                                                       gACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCa                                                  >  2:1007805/1‑239 (MQ=255)
                                                                                                                                                                                          gCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGCGTACTTACATTCTGGCACAAATTCCGTAGAGTTGGCGCTCTCCATGTTGGCAACATGGCGAGCGTAATCAAtt                                               >  1:1395336/1‑239 (MQ=255)
                                                                                                                                                                                             aaacaaTTGTCGGGTCTGTGTACAGCGGGCGACCCAGGCTATCGGGACCCAACTGGCACTGCTGCGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc                                            <  2:1777162/238‑1 (MQ=255)
                                                                                                                                                                                              aacaaTTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc                                            >  1:1033033/1‑238 (MQ=255)
                                                                                                                                                                                                catttGCCGGCGCTTTGTACGGCGGGCGACCCAGTTGACCGGAAACCACCTGTCACTGCTGTCGCCCGAGAGGCGGGTCACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGcc                                         <  2:1374801/236‑1 (MQ=255)
                                                                                                                                                                                                caaTTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGcc                                         <  1:1881617/239‑1 (MQ=255)
                                                                                                                                                                                                aaaTTGTGGGCGCTTTGTACAGCGGGCGAACCAGGCTACCGGGAACCAACTGGCCCTGCTGGGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGcc                                         <  2:310466/238‑1 (MQ=255)
                                                                                                                                                                                                     gTCGGCGCATTGTACAGCTGGCGACCCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCGTAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCGCCTg                                    <  1:789644/239‑1 (MQ=255)
                                                                                                                                                                                                        ggCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGCGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGAGTAATCAATTAACGCCACCTGcct                                 >  2:2077271/1‑237 (MQ=255)
                                                                                                                                                                                                        ggCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCAt                                 >  2:15928/1‑239 (MQ=255)
                                                                                                                                                                                                          cgcATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATa                                >  1:1564994/1‑238 (MQ=255)
                                                                                                                                                                                                                      cTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTGCCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCca                                                                                                                               <  1:2091631/131‑1 (MQ=255)
                                                                                                                                                                                                                      cTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCca                                                                                                                               >  2:2091631/1‑131 (MQ=255)
                                                                                                                                                                                                                       tGGCGACCCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc                  <  1:513572/239‑1 (MQ=255)
                                                                                                                                                                                                                       tGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGAGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGc                   >  1:1784297/1‑238 (MQ=255)
                                                                                                                                                                                                                        ggCGACCCAGGTGATCGTGAACCAACCGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc                  <  2:1967048/238‑1 (MQ=255)
                                                                                                                                                                                                                         gcaaaCCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGccc                 <  1:543797/235‑1 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATcgcg                                                                                                                                                   >  2:1578444/1‑108 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGt                                                       <  1:988739/200‑1 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGt                                                       >  2:988739/1‑200 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCTACCTGCATACCCAGGCAAATGcccc                >  2:1508576/1‑238 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGccc                 <  2:2047344/238‑1 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa                >  2:1647006/1‑239 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa                >  2:1925037/1‑239 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa                >  1:1878551/1‑239 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa                >  2:1236282/1‑239 (MQ=255)
                                                                                                                                                                                                                         gCGAACCAGGCTATCGTGAACCAACTAGCACTGCTGTGCGCCGAGACACATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCGTCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACCGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCCTGTTGGCAACATGGCCAGCGTAATCAATTAACGCCACCTGCATACCCCGGCAAATGccc                 >  2:1064633/1‑238 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCggg                                                                                                                       >  2:117471/1‑134 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCggg                                                                                                                       <  1:117471/134‑1 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAg                                                          >  2:645569/1‑195 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAg                                                          <  1:645569/195‑1 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCa                                        <  1:868624/213‑1 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCa                                        >  2:868624/1‑213 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCaa                       >  2:584242/1‑230 (MQ=255)
                                                                                                                                                                                                                           gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCaa                       <  1:584242/230‑1 (MQ=255)
                                                                                                                                                                                                                             aCCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGAt             <  1:15928/238‑1 (MQ=255)
                                                                                                                                                                                                                             aCCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATa            <  1:1516877/239‑1 (MQ=255)
                                                                                                                                                                                                                             aCCAGGCTATCGTGAACCAACTGCCACTGCTGTGCGCCGAGACCAATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGAt             <  2:752457/238‑1 (MQ=255)
                                                                                                                                                                                                                                aGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTgg                                                                                     >  2:1846066/1‑163 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                           
GCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTCAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTG  >  NC_007779/2906741‑2907210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A