Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 317 199.5 4471134 93.7% 4189452 224.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,906,975 C→G 100% D450H (GAC→CAC)  pyrG ← CTP synthase (glutamine hydrolyzing)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077792,906,9750CG99.1% 483.2 / ‑6.2 146D450H (GAC→CAC) pyrGCTP synthase (glutamine hydrolyzing)
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (88/54);  minor base A (0/3);  total (89/57)
Fisher's exact test for biased strand distribution p-value = 5.88e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 155 total aligned reads displayed.

CAGCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTCAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAG  >  NC_007779/2906739‑2907202
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                   
aaaggggAGACCATGACGTGGAGTGGATGTAAACTCCGGAGGGAACTGCCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGACCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTgaa                                                                                                                                                                                                                                   <  2:959733/235‑1 (MQ=255)
   cGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTgaacca                                                                                                                                                                                                                                >  1:348454/1‑239 (MQ=255)
    gggTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTgaacca                                                                                                                                                                                                                                <  1:1526185/238‑1 (MQ=255)
      gTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTgaaccaacc                                                                                                                                                                                                                             >  2:2004057/1‑238 (MQ=255)
      gTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTgaaccaac                                                                                                                                                                                                                              <  2:1825676/238‑1 (MQ=255)
      gTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGCGATTCGGAACTTCGATGATCTCGACCAACTGACCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTgaacta                                                                                                                                                                                                                                >  1:96162/1‑234 (MQ=255)
               aCGTGGAGTAGAAGTAACCTCCGGATGGAACTGCCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGAAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCACCAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCActgct                                                                                                                                                                                                                    <  2:1584991/239‑1 (MQ=255)
                    gAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTgc                                                                                                                                                                                                                >  2:805349/1‑238 (MQ=255)
                     aGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTgcg                                                                                                                                                                                                               >  1:1019119/1‑238 (MQ=255)
                       tAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCg                                                                                                                                                                                                            >  2:2054930/1‑239 (MQ=255)
                        aGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCga                                                                                                                                                                                                           >  1:358764/1‑239 (MQ=255)
                         taagcactcTCCGGAAGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCGCGCCCAACTGAGCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTGCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCgag                                                                                                                                                                                                          <  2:95746/231‑1 (MQ=255)
                           aGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCgag                                                                                                                                                                                                          <  1:872054/237‑1 (MQ=255)
                           aGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCgag                                                                                                                                                                                                          <  1:1176156/237‑1 (MQ=255)
                               aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACg                                                                                                                                                                                                       >  2:1405661/1‑236 (MQ=255)
                               aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                    >  1:883522/1‑239 (MQ=255)
                               aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                    >  1:706313/1‑239 (MQ=255)
                               aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                    >  1:477505/1‑239 (MQ=255)
                               aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                    >  1:1739849/1‑239 (MQ=255)
                                 cTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGCGCGCCGAGACGCATgg                                                                                                                                                                                                  >  1:528029/1‑239 (MQ=255)
                                    cGGATGGAACTGGCAAGCCGCGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTTGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGGTAACCAACTGGCACTGCTGTGCGCAGAGACGCATGGTa                                                                                                                                                                                                >  2:2198195/1‑238 (MQ=255)
                                      gATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGGAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTAcc                                                                                                                                                                                              >  1:281412/1‑238 (MQ=255)
                                      gATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTAcc                                                                                                                                                                                              >  1:807168/1‑238 (MQ=255)
                                       aTGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCa                                                                                                                                                                                                     <  1:2387/230‑1 (MQ=255)
                                        tGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTAccgc                                                                                                                                                                                            <  1:1405661/238‑1 (MQ=255)
                                                     ccACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGctct                                                                                                                                                                                >  1:222048/1‑237 (MQ=255)
                                                     ccACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCtctt                                                                                                                                                                               >  2:1053750/1‑238 (MQ=255)
                                                           aCCCCGGGTGATTCGGAACTTCGATGTCTTCGACCAACTGTTCTTCCCCGGAACGGCCCGCACCGCGCAGACCTGCTTCTTCAATCTGTTTCAACAGCAGTTTGTTGACTTCGTAAGGGTGACGATGACGCTCAACATTTGTCGGCGCA‑T‑TGTACAGCTGTCGAACCAGGTTATCGTGAACCAACTGGCTCTGCTGTGCGCGGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTa                                                                                                                                                                        <  2:1019119/239‑1 (MQ=255)
                                                             caggggTGATTGGCAACATCGAGGATCTCGACCTACTGATCTACCCCGGAACGGCCCGCGACGCGAAGACCGGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGAGACGATGACGCTAAACAATTGTCGGCGCA‑T‑TGTACAGGGGGGGAACCAGGCTACCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTCCCGCCGAGATCGCTCTTCTCGCTACg                                                                                                                                                                      <  2:706313/236‑1 (MQ=255)
                                                               cGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGa                                                                                                                                                                     >  1:759409/1‑238 (MQ=255)
                                                               cGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGa                                                                                                                                                                     >  2:1528153/1‑238 (MQ=255)
                                                                     aTTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTgcgc                                                                                                                                                                                                              <  1:1786974/191‑1 (MQ=255)
                                                                     aTTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACCTCa                                                                                                                                                               >  2:2131116/1‑238 (MQ=255)
                                                                          gAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGCTCGCTCTTCTCGCTACCAACTTCAACGtt                                                                                                                                                          >  2:827535/1‑238 (MQ=255)
                                                                                cGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGttt                                                                                                                                                   >  2:1489390/1‑239 (MQ=255)
                                                                                     atCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATc                                                                                                                                              >  1:1710484/1‑239 (MQ=255)
                                                                                        tcGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATcgcg                                                                                                                                           <  1:1995606/239‑1 (MQ=255)
                                                                                          gACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCACCTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGcc                                                                                                                                         <  1:1553731/239‑1 (MQ=255)
                                                                                             aacctattcaccCCCGGACCGGCCCGCAACGGGCAGACCGGCTTCTTCAATCGTTTTCACCGGCAGGTGGTTGACTTCGTAAGGGTGACGATGACGTTCAACAATGGCCGGCGCT‑T‑GGTACGGCGGGCGAACCAGGCTATCGTGAACCACCTGGCCCTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACt                                                                                                                                      <  2:883522/232‑1 (MQ=255)
                                                                                               aCTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCg                                                                                                                                    >  2:1343838/1‑239 (MQ=255)
                                                                                               aCTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCg                                                                                                                                    >  1:1915227/1‑239 (MQ=255)
                                                                                                        ccccGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCCCCACTCGGTAATCAgc                                                                                                                           >  2:464088/1‑239 (MQ=255)
                                                                                                         ccagaaagggCCGGCACCGCGCAGACTTGCATCTTCTATTTTTTTAAACGTCAGTGTGTTGACTGCGGACCGTGGCCGGTGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGGGCCCCGGGCTGTCGTGAACCACCTCGCCCTGCTGTGCGCCGAGACGAGTGTTTCCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAgcg                                                                                                                          <  2:1804287/231‑1 (MQ=255)
                                                                                                           cGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAgcgc                                                                                                                         >  1:84712/1‑238 (MQ=255)
                                                                                                             gAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCcac                                                                                                                      >  1:1684888/1‑239 (MQ=255)
                                                                                                             gAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTAGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCcac                                                                                                                      >  1:551424/1‑239 (MQ=255)
                                                                                                                cGGCCCGCAACGCGTGGACCTGCATCTTAAACCTGTTCAAACAGCATGTTTTGGATTTGGGAAGGGTGACGCGGACGCTCAACAATTGGCGGCGCT‑T‑TGTACACCGGGCGAACCAGGCTATCGGGAACCAACTGGCCCTGCTGTGCGCCGAGACGCAGGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAAc                                                                                                                   <  2:76230/239‑1 (MQ=255)
                                                                                                                  gCCCGCAACGCTCGGACCTGCATCTTCAATCTGTTACACCGGCATGTTGTTGATTTCGTCACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCAGGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCg                                                                                                                 <  2:1239114/239‑1 (MQ=255)
                                                                                                                   cccGCACCGCGCGGACCTGCATCTTCATACTGTTTCAACAGCATGTTGTTGACTTCGTAAGGGTGACGTTGACGCTCAACAATGGTCGGCGCA‑T‑TGTGCGGCGGGCGAACCAGTCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCTTGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCg                                                                                                                 <  2:1739849/238‑1 (MQ=255)
                                                                                                                   cccGCAACGCGCAGACCTGCATCTTCACTCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGAACGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCgg                                                                                                                >  1:39612/1‑239 (MQ=255)
                                                                                                                        aaCGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGAATTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGACCGCGCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACt                                                                                                           >  1:2079854/1‑239 (MQ=255)
                                                                                                                          cgcgCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTa                                                                                                         <  1:795444/239‑1 (MQ=255)
                                                                                                                               aGACTTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCGGGCGAACCAGGCTATCGGGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGt                                                                                                     <  1:639775/238‑1 (MQ=255)
                                                                                                                                           tCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCCCAACCGGGTACTTACAGTCTGGCACAAAtt                                                                                         >  2:1636526/1‑238 (MQ=255)
                                                                                                                                                   tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCActgct                                                                                                                                                                                                                    <  2:1842974/107‑1 (MQ=255)
                                                                                                                                                   tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCActgct                                                                                                                                                                                                                    >  1:1842974/1‑107 (MQ=255)
                                                                                                                                                   tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCca                                                                                                                       >  2:790929/1‑200 (MQ=255)
                                                                                                                                                   tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGt                                                                                >  2:1207773/1‑239 (MQ=255)
                                                                                                                                                    ttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTa                                                                                                         >  1:18273/1‑213 (MQ=255)
                                                                                                                                                      cAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGACCCACCTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTgg                                                                             <  1:1967336/239‑1 (MQ=255)
                                                                                                                                                        atggCATGTAGTGGACGTCTTACCGTTGACCAGGACCTTCACAAATCGTCGGCGCT‑T‑GGACCAGCGGGGGACCCAGGGTATCGTGACCCACCTGCCCCTGCTGTGCGCCGAGACTCTTGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCg                                                                           <  2:358764/236‑1 (MQ=255)
                                                                                                                                                        acggtagttttttgACGTGGTAGCGGTGACGTTGGCGTCCAACAATTG‑CTGGGCA‑TGTGTACAGCGGGCGAACCAGGCTAGCGTGAACCACTGGGCTCTGCGGTGCGCCGAGGAGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCg                                                                           <  2:1355810/228‑1 (MQ=255)
                                                                                                                                                        acaaggtgttgttgtCTTGGTGAGGGTGCGGATGACTCTAAACAATTGTCGGCTCA‑T‑TTGACAGCTGGCGAACCAGGGATTCGGGACCCAACTGCCAGGGTTGTGGGCCGAGACGCATGTTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCg                                                                           <  2:39612/233‑1 (MQ=255)
                                                                                                                                                            cATGTTGTTGACTTCGTAACGGTGACGATGACACTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTtc                                                                        >  1:1620442/1‑238 (MQ=255)
                                                                                                                                                             aTGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTtct                                                                       >  1:492856/1‑238 (MQ=255)
                                                                                                                                                             aTGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTtct                                                                       >  1:402336/1‑238 (MQ=255)
                                                                                                                                                                      aCTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGc                                                             >  2:197856/1‑239 (MQ=255)
                                                                                                                                                                      aCTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCAATGTTGGc                                                             >  2:1146268/1‑239 (MQ=255)
                                                                                                                                                                       cTTCGTAACGGGGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGACCCAGGCTATCGTGAACCACCTGGCACTGCTGTGCGCCGAGACGTATGGTTCCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGc                                                             <  1:1260435/238‑1 (MQ=255)
                                                                                                                                                                          cGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACACATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACa                                                         >  2:964883/1‑239 (MQ=255)
                                                                                                                                                                          cGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACa                                                         >  2:1868663/1‑239 (MQ=255)
                                                                                                                                                                              aCGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGc                                                     <  1:21926/239‑1 (MQ=255)
                                                                                                                                                                                ggTGACGATGACGCTCACCAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCGGAGACGCATGGCACAGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATGCCGCCACTCGCTATTCTGCACCACAACCGGGCACTTACAGTCTGGCACAAATGCCGACTCGTTGGCGTACTGCATGTGTGCAACAAGGCgc                                                   >  2:1390748/1‑238 (MQ=255)
                                                                                                                                                                                  tgcggATGACTCCAAACAATGTTCGG‑GCATT‑TGTACAGCTGGGGAACCGGGTTTCCGTGACCCACCTGCCACTGCGTGGGGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAg                                                  <  2:402336/234‑1 (MQ=255)
                                                                                                                                                                                  tGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCCCTACGAACTTCAACGTTTCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACGGGGTACTTACAGTCTGGCCCAAATACCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGc                                                 >  2:1088403/1‑239 (MQ=255)
                                                                                                                                                                                    aCGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGt                                               >  2:345297/1‑239 (MQ=255)
                                                                                                                                                                                      gATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTaa                                             <  1:1343838/239‑1 (MQ=255)
                                                                                                                                                                                      gATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTaa                                             <  1:2093146/239‑1 (MQ=255)
                                                                                                                                                                                               caacaaTTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc                                    <  1:1238561/239‑1 (MQ=255)
                                                                                                                                                                                                 acagTTGTCGGCGCA‑T‑TGTCCAGCGGGCGAACCAGGCTATCGTGAACCAACGGGCACTGCTGTGCGCCGAGGCGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGc                                  <  1:2233450/239‑1 (MQ=255)
                                                                                                                                                                                                  caaTTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGcc                                 <  1:1489390/239‑1 (MQ=255)
                                                                                                                                                                                                        tCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGc                                  <  1:104979/232‑1 (MQ=255)
                                                                                                                                                                                                        tCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATAGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCCGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGc                           >  1:1906003/1‑239 (MQ=255)
                                                                                                                                                                                                          ggCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCa                                                                                                                             <  1:1145059/139‑1 (MQ=255)
                                                                                                                                                                                                          ggCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCa                                                                                                                             >  2:1145059/1‑139 (MQ=255)
                                                                                                                                                                                                            cgcA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATa                        >  1:53014/1‑238 (MQ=255)
                                                                                                                                                                                                                        aGCTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAAt             >  1:1215322/1‑239 (MQ=255)
                                                                                                                                                                                                                          cTGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATg            >  2:512672/1‑238 (MQ=255)
                                                                                                                                                                                                                           tGGCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc          <  1:1468838/239‑1 (MQ=255)
                                                                                                                                                                                                                            ggCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc          <  1:197856/238‑1 (MQ=255)
                                                                                                                                                                                                                             gCGAACCAGGCTATCGTGAACCACCTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGccc         <  1:2004057/238‑1 (MQ=255)
                                                                                                                                                                                                                             gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa        >  2:893310/1‑239 (MQ=255)
                                                                                                                                                                                                                             gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa        >  1:442118/1‑239 (MQ=255)
                                                                                                                                                                                                                             gCGAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa        >  2:1272161/1‑239 (MQ=255)
                                                                                                                                                                                                                             gCGAACCAGGCTATCGTGAACCAACGGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCCCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGCTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa        >  2:319110/1‑239 (MQ=255)
                                                                                                                                                                                                                               gAACCAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGa      >  2:2079021/1‑239 (MQ=255)
                                                                                                                                                                                                                               gAACCAGGCTATCGTGAACCAACTAGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGa      >  2:339021/1‑239 (MQ=255)
                                                                                                                                                                                                                               gAACCAGGCTATAGTGAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTAACGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGa      >  1:1267573/1‑239 (MQ=255)
                                                                                                                                                                                                                                 accggtatagcGTAAACCACCTGGCTCGGCTGGGGCCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGAt     <  2:222048/228‑1 (MQ=255)
                                                                                                                                                                                                                                   cAGGCTATCGTGAACCAACTGGCACTGCTGTGCGCCGAGCCGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAg  <  1:1868663/239‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                   
CAGCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGCAACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCA‑T‑TGTACAGCTGGCGAACCAGGCTATCGTCAACCAACTGGCACTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAG  >  NC_007779/2906739‑2907202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A