Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F167 I0 R1 255 179.2 3742276 95.5% 3573873 223.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,906,975 C→G 100% D450H (GAC→CAC)  pyrG ← CTP synthase (glutamine hydrolyzing)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077792,906,9750CG100.0% 565.8 / ‑6.7 170D450H (GAC→CAC) pyrGCTP synthase (glutamine hydrolyzing)
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (93/73);  minor base A (0/2);  total (93/77)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 179 total aligned reads displayed.

GCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTCAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATA  >  NC_007779/2906741‑2907207
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         
gCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaacc                                                                                                                                                                                                                                       >  1:1748795/1‑239 (MQ=255)
gCGGGAGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAAATGTCGGCGCATTGTACAGCTGGCGAACCAGGCCATCGTgaacc                                                                                                                                                                                                                                       >  2:37860/1‑239 (MQ=255)
  gggTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaa                                                                                                                                                                                                                                         <  2:1748795/235‑1 (MQ=255)
  gggTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaa                                                                                                                                                                                                                                         <  2:1054472/235‑1 (MQ=255)
   ggTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaacca                                                                                                                                                                                                                                      >  2:284132/1‑237 (MQ=255)
    gTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTgaacca                                                                                                                                                                                                                                      >  1:1061533/1‑236 (MQ=255)
      gACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTgg                                                                                                                                                                                                                                 <  1:1863045/239‑1 (MQ=255)
        ccATCACGTGGAGTAGAAGTAACACCCGGATGGAACTGGCAAGCCACGAACCTCGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTGCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCa                                                                                                                                                                                                                               <  2:359847/239‑1 (MQ=255)
         cATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCa                                                                                                                                                                                                                               >  2:1763135/1‑238 (MQ=255)
              cGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑ct                                                                                                                                                                                                                            >  1:1600124/1‑235 (MQ=255)
                     tAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCg                                                                                                                                                                                                                 >  2:1180047/1‑239 (MQ=255)
                         aGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCgag                                                                                                                                                                                                               <  1:505511/237‑1 (MQ=255)
                             aaCTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCAt                                                                                                                                                                                                         >  1:1138756/1‑239 (MQ=255)
                             aaCTCCGGACGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCCCAACAATTGTCGGCGCATTGTACAGATGGCGACCCAGGCTATCGTGAACCAACTGGCA‑CTGACGAGCGCCGAGACg                                                                                                                                                                                                            >  2:656018/1‑236 (MQ=255)
                                  cGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGGGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTa                                                                                                                                                                                                     >  2:1827313/1‑238 (MQ=255)
                                                   ccACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGctct                                                                                                                                                                                     >  1:594798/1‑237 (MQ=255)
                                                   ccACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGctct                                                                                                                                                                                     >  2:1513862/1‑237 (MQ=255)
                                                   ccACGAACCACGGGTGATTCGGAACTTCGACGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGCCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGCTCCctct                                                                                                                                                                                     >  2:1430002/1‑237 (MQ=255)
                                                   ccACGAACCACGGGTGATTCGGAACTGCGATGATCTCGACCATCAGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCATCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTCACGTGAACCAACTGGCa                                                                                                                                                                                                                               <  2:1381498/196‑1 (MQ=255)
                                                        aaCCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCgag                                                                                                                                                                                                               <  2:827557/206‑1 (MQ=255)
                                                        aaCCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCt                                                                                                                                                                              >  1:732605/1‑239 (MQ=255)
                                                             cGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTgcg                                                                                                                                                                                                                    >  1:1381498/1‑196 (MQ=255)
                                                             cGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGa                                                                                                                                                                          >  2:189133/1‑238 (MQ=255)
                                                                   aTTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCa                                                                                                                                                                    >  2:150280/1‑238 (MQ=255)
                                                                         aaCTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTg                                                                                                                                                              >  1:1377038/1‑238 (MQ=255)
                                                                         aaCTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTg                                                                                                                                                              >  2:272430/1‑238 (MQ=255)
                                                                            ttCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGt                                                                                                                                                          >  1:505683/1‑239 (MQ=255)
                                                                              cGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGttt                                                                                                                                                        >  2:80782/1‑239 (MQ=255)
                                                                              cGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGttt                                                                                                                                                        >  1:1106157/1‑239 (MQ=255)
                                                                               gatgatCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGttt                                                                                                                                                        >  1:83430/1‑238 (MQ=255)
                                                                                      tcGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATcgcg                                                                                                                                                <  1:538745/239‑1 (MQ=255)
                                                                                      tcGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATcgc                                                                                                                                                 >  1:407470/1‑238 (MQ=255)
                                                                                      ccGACCAACGGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATGGTACAGCTGGCGAACCAGGCTATCGTGACCCACCTGGCG‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATcgcg                                                                                                                                                <  1:164667/238‑1 (MQ=255)
                                                                                       cGACCAACGACTCACCCCCGGAACGCCCCGC‑AACGCCCCGCCCTGCTTCTTCAATCTGTTTAAACAGCATGTTGTTGTCTTCGTACCGGGGACGATGACGCTCAACAATTGTCGGCGCTTTGTACAGCTGGCGACCCAGGCTATCGTGAACCAACTGGCC‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCgcgc                                                                                                                                               <  2:1138756/239‑1 (MQ=255)
                                                                                         aCCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGcc                                                                                                                                              >  1:824142/1‑238 (MQ=255)
                                                                                          ccAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCa                                                                                                                                             <  1:876052/238‑1 (MQ=255)
                                                                                             aCTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACGGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCg                                                                                                                                         >  2:1702070/1‑239 (MQ=255)
                                                                                             aCTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCg                                                                                                                                         >  1:1410363/1‑239 (MQ=255)
                                                                                              cTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCgg                                                                                                                                        >  2:1401672/1‑239 (MQ=255)
                                                                                                    atcCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACg                                                                                                                                                                           >  2:853268/1‑198 (MQ=255)
                                                                                                    atcCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCa                                                                                                                                  >  1:1775487/1‑239 (MQ=255)
                                                                                                     tcCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACGGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAg                                                                                                                                 <  1:272430/239‑1 (MQ=255)
                                                                                                       cccGGAACGGCCCGC‑AACGCGCAGCCCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAgcg                                                                                                                               <  1:1520120/239‑1 (MQ=255)
                                                                                                        ccGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAgcg                                                                                                                               >  2:1073961/1‑238 (MQ=255)
                                                                                                           gAACCGGCCGCAAACGCGCGGACAGGCATTTTCAATATGTTTAAACAGCATGTTTGTGGTTTCGTAACGGTGACGATGACGCTCAAAAATTGCCGGCGCTTGGTCCAGCTGGCGAACCAGGCTATCGTGAACCACCTGGCA‑CTGCTGTGCCCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCca                                                                                                                            <  2:1225335/239‑1 (MQ=255)
                                                                                                              cGGCCCCC‑AACGCGCAGACCCGCATCTTCAATCTGTTTAAACAGCATGTTGTTGATTTCGTAACGGTGACGATGCCGCTCAACAATTGTGGACGAATTGTACAGTTGGCGAACCAGGCTATCGTGAACCAACTGGCC‑CTGCTGGGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAAc                                                                                                                        <  2:635947/239‑1 (MQ=255)
                                                                                                                gCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCCACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCCCCACTCGGTAATCCGCGCCACAACCg                                                                                                                      >  2:176069/1‑239 (MQ=255)
                                                                                                                 cccGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCgg                                                                                                                     >  1:726056/1‑239 (MQ=255)
                                                                                                                 cccGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCgg                                                                                                                     >  1:857259/1‑239 (MQ=255)
                                                                                                                    caaaccgcgCAGATCTGAATCTTCAATCTGTTTCAACAGCATGTGGTTGTCTTCGTACCGGTGACGATGACGCTCAACACTTGTCGGCGCATTGTACAGCGGGCGACCCAGCCTATCGTGACCCACCTGGCA‑CTTGTGGGCGCCGGGCCGCTTGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGt                                                                                                                   <  2:534077/234‑1 (MQ=255)
                                                                                                                           cgcAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACa                                                                                                            >  2:666055/1‑239 (MQ=255)
                                                                                                                            gcAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAg                                                                                                           >  1:1080655/1‑239 (MQ=255)
                                                                                                                               gcccTGCTTTTTCAATCTTTTTAAACGGCATGTTGTTGCCTTGGTAACGGGACCGATGCCGCTCAAAAATTGGCGGCGCTTTGTACAGCGGGCGAACCAGGCTACCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCt                                                                                                        <  2:1471112/237‑1 (MQ=255)
                                                                                                                                    gattCTTCAATCTTTTTCAACAGCATGTTGTTGACTTCGGAACGGTGACGTTGACGCTCAACAATTGTCGGCGCATTGTCCAGCTGGCGACCGAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGAATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGcac                                                                                                   <  2:919714/236‑1 (MQ=255)
                                                                                                                                     cATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGcaca                                                                                                  >  1:627753/1‑239 (MQ=255)
                                                                                                                                          tCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAAc                                                                                                                        <  1:311697/212‑1 (MQ=255)
                                                                                                                                            aaTCTTTTTCACCAGCAGGGTGTTGATTTGTGAACGGGGACGAGGACGCCCAACAAGTTTGGGCGCTTTGAACAGCGGGCGACCCGGGCTATCGTGAACCACCTGGCA‑CTGCTGTGCGCCGAGAGGCATGGTCCCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCg                                                                                           <  2:1600124/239‑1 (MQ=255)
                                                                                                                                                  tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGt                                                                                     >  2:32046/1‑239 (MQ=255)
                                                                                                                                                  tttCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACCCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGACCAAATTCCGGAGAGt                                                                                     >  2:1084805/1‑239 (MQ=255)
                                                                                                                                                     cAACGGCATGTTTTGCACTCCGTACGGGGGACGATGCCGCTAAACATTTGTCGGCGCTTTGTCCAGCGGGCGACCCAGGCTATCGTGACCCACCTGCCA‑CTGCTGTGCCCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTgg                                                                                  <  2:247014/239‑1 (MQ=255)
                                                                                                                                                          gCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGtt                                                                              >  2:458359/1‑238 (MQ=255)
                                                                                                                                                          gCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGt                                                                               >  1:683823/1‑237 (MQ=255)
                                                                                                                                                          gCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGt                                                                               >  1:1432088/1‑237 (MQ=255)
                                                                                                                                                           cATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTtc                                                                             >  1:1852130/1‑238 (MQ=255)
                                                                                                                                                             tgttgtTGACTTCGTACCGGTGACGATTCCGCTCAACAATTGGCGGCCCATTTTACAGCTGCCGAACCAGGCTACCGTGAACCAACTGCCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTcc                                                                          <  2:823860/239‑1 (MQ=255)
                                                                                                                                                               ttgttgGTTTCGTAACGGGGACGATGCGCCTCAAAAAGGGTGGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCACCGGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACaa                                                                                                 <  2:1001228/214‑1 (MQ=255)
                                                                                                                                                                         cGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTaga                                                                                       >  1:1001228/1‑214 (MQ=255)
                                                                                                                                                                         cGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACa                                                              >  1:1090254/1‑239 (MQ=255)
                                                                                                                                                                            aaCGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATg                                                            >  2:1104924/1‑238 (MQ=255)
                                                                                                                                                                                 tGAGGAGGACCCGCAACAATGGCAGGCCCATTGTCCCGCGGGGGAACCAGGCTGTCGGGAACCAAC‑GGCACCTGCTGTGCGCCGGGCCGCTGGTTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAg                                                       <  2:422927/238‑1 (MQ=255)
                                                                                                                                                                                 tGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGc                                                      >  1:968502/1‑239 (MQ=255)
                                                                                                                                                                                   aCGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGt                                                    >  2:365585/1‑239 (MQ=255)
                                                                                                                                                                                         aCGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCaa                                              >  1:525932/1‑239 (MQ=255)
                                                                                                                                                                                                 caaTTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGcc                                      <  1:1513862/239‑1 (MQ=255)
                                                                                                                                                                                                 aaaTTGTCGGGGCATTGTACAGCTGGCGAACCGGGCTATCGTGACCCAACTGGCC‑CTGCTGTGCGCCGAGCCGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGcc                                      <  2:572961/238‑1 (MQ=255)
                                                                                                                                                                                                       tCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTa                                                                                                              <  1:1505779/161‑1 (MQ=255)
                                                                                                                                                                                                         ggCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCAt                              >  2:584703/1‑239 (MQ=255)
                                                                                                                                                                                                         ggCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCAt                              >  1:807562/1‑239 (MQ=255)
                                                                                                                                                                                                         ggCGCATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACACGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCAt                              >  1:235228/1‑239 (MQ=255)
                                                                                                                                                                                                           cgcATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTa                                                                                                              >  1:1744173/1‑157 (MQ=255)
                                                                                                                                                                                                           cgcATTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAAt                                                 >  1:351099/1‑218 (MQ=255)
                                                                                                                                                                                                              aTTGTACAGCTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCa                         >  1:460057/1‑239 (MQ=255)
                                                                                                                                                                                                                       cTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAAtt                                            >  2:740344/1‑211 (MQ=255)
                                                                                                                                                                                                                       cTGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAAtt                                            <  1:740344/211‑1 (MQ=255)
                                                                                                                                                                                                                        tGGCGACCCAGGCTATCGTGAACCAACTGGCA‑CTGCTGGGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc               <  1:973287/239‑1 (MQ=255)
                                                                                                                                                                                                                        tGGCGAACCAGTCTATCGTCAACCAACTGTCC‑CTGCTGTGCGCCGACACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc               <  1:37860/239‑1 (MQ=255)
                                                                                                                                                                                                                        tGGCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc               <  1:1833787/239‑1 (MQ=255)
                                                                                                                                                                                                                         ggCGAACCCGGCTATCGTGAACAATCTGGCA‑CTGCTGTGGGCGGAGACGCATGTTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGcc               <  2:1128468/238‑1 (MQ=255)
                                                                                                                                                                                                                          gCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGccc              >  2:970953/1‑238 (MQ=255)
                                                                                                                                                                                                                          gCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa             >  1:383550/1‑239 (MQ=255)
                                                                                                                                                                                                                          gCGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa             >  2:783689/1‑239 (MQ=255)
                                                                                                                                                                                                                          gCGAACCAGGCTATCGTGAACCAACGGGCA‑CTGCTGGGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGccc              <  1:540766/238‑1 (MQ=255)
                                                                                                                                                                                                                           cGAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAg            >  1:905269/1‑239 (MQ=255)
                                                                                                                                                                                                                            gacccAGGCTATCGTGACCCAACTGGCC‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAg            <  2:483280/235‑1 (MQ=255)
                                                                                                                                                                                                                            gAACCAGGCTATGGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAg            <  1:1278329/238‑1 (MQ=255)
                                                                                                                                                                                                                            gAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAg            <  2:525932/238‑1 (MQ=255)
                                                                                                                                                                                                                            gAACCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGa           >  2:1557909/1‑239 (MQ=255)
                                                                                                                                                                                                                              aCCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGAt          <  1:150280/238‑1 (MQ=255)
                                                                                                                                                                                                                              aCCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATa         <  1:1180047/239‑1 (MQ=255)
                                                                                                                                                                                                                              aCCAGGCTATCGTGAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATa         <  1:1118913/239‑1 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         
GCGGGTGACCATCACGTGGAGTAGAAGTAAACTCCGGATGGAACTGGCAAGCCACGAACCACGGGTGATTCGGAACTTCGATGATCTCGACCAACTGATCATCCCCGGAACGGCCCGC‑AACGCGCAGACCTGCATCTTCAATCTGTTTCAACAGCATGTTGTTGACTTCGTAACGGTGACGATGACGCTCAACAATTGTCGGCGCATTGTACAGCTGGCGAACCAGGCTATCGTCAACCAACTGGCA‑CTGCTGTGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATA  >  NC_007779/2906741‑2907207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A