Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F1 I2 R1
|
766 |
64.2 |
3232166 |
90.9% |
2938038 |
104.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,466,313 |
A→G |
L138P (CTT→CCT) |
bfr ← |
bacterioferritin, iron storage and detoxification protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,466,313 | 0 | A | G | 100.0%
| 258.9
/ NA
| 72 | L138P (CTT→CCT) | bfr | bacterioferritin, iron storage and detoxification protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/34); total (38/34) |
AGCATGATAAACCTGGGGTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAAGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATCCAGCTCA > NC_000913/3466179‑3466447
|
agcaTGATAAACCTGGGGTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTc < 1:351885/139‑1 (MQ=255)
caTGATAAACCTGGGGTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCg > 1:115342/1‑139 (MQ=255)
tAAACCTGGGGTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTcc > 2:163562/1‑139 (MQ=255)
ggggTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑Gt > 1:812470/1‑139 (MQ=255)
ggTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCg > 1:1187618/1‑139 (MQ=255)
tATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTAAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGat < 2:812470/139‑1 (MQ=255)
aTCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGata < 2:98316/139‑1 (MQ=255)
aTCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGata < 2:1187618/139‑1 (MQ=255)
cTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGata < 1:1355404/137‑1 (MQ=255)
cTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGata > 2:1355404/1‑137 (MQ=255)
cTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATg < 2:115342/139‑1 (MQ=255)
cTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATg > 2:1406523/1‑139 (MQ=255)
aTCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑Gt < 1:1375159/123‑1 (MQ=255)
aTCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑Gt > 2:1375159/1‑123 (MQ=255)
aTCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCttcttc > 2:354303/1‑139 (MQ=255)
ttaACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTc > 1:724269/1‑101 (MQ=255)
ttaACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTc < 2:724269/101‑1 (MQ=255)
taACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCaa > 1:242156/1‑139 (MQ=255)
cGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑Gt > 1:1612451/1‑110 (MQ=255)
cGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑Gt < 2:1612451/110‑1 (MQ=255)
cGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAAtt > 1:1167590/1‑139 (MQ=255)
cGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAAtt > 2:752044/1‑139 (MQ=255)
gggAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAAttt < 2:1167590/139‑1 (MQ=255)
ggAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCGCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTtcat < 1:1067476/126‑1 (MQ=255)
ggAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTtcat < 2:650201/126‑1 (MQ=255)
ggAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTc > 1:1351476/1‑139 (MQ=255)
ggAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGAACAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTtcat > 2:1067476/1‑126 (MQ=255)
ggAGGGTTCTCCCTCCCGACACGGCTCAACCTTCATCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGGTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTtcat > 1:650201/1‑126 (MQ=255)
aGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTa < 1:1406523/139‑1 (MQ=255)
aGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTa > 2:1299555/1‑139 (MQ=255)
tctcCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCAGACAGGTCGATATGGCCTTCTTCATCACGCAAAATTTCTa > 2:1319294/1‑139 (MQ=255)
tctcCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTatcatc < 1:1299555/139‑1 (MQ=255)
cGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTTCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTc < 2:1053095/78‑1 (MQ=255)
cGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTc > 1:1053095/1‑78 (MQ=255)
cGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGata < 1:439279/92‑1 (MQ=255)
cGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGata > 2:439279/1‑92 (MQ=255)
ggCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACg < 1:814705/139‑1 (MQ=255)
gCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTccag > 1:429424/1‑80 (MQ=255)
gCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTccag < 2:429424/80‑1 (MQ=255)
gCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGt > 2:355002/1‑139 (MQ=255)
tCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTaa > 2:357708/1‑139 (MQ=255)
ttcGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACg < 2:672161/96‑1 (MQ=255)
ttcGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACg > 1:672161/1‑96 (MQ=255)
tcGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGaa < 2:1214497/136‑1 (MQ=255)
tcGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGaa > 1:1214497/1‑136 (MQ=255)
gtgCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATa < 2:1351476/139‑1 (MQ=255)
tgCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTccagc > 2:194636/1‑58 (MQ=255)
tgCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTccagc < 1:194636/58‑1 (MQ=255)
tgCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATaa > 1:192625/1‑139 (MQ=255)
gCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGaa < 1:843794/120‑1 (MQ=255)
gCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGaa > 2:843794/1‑120 (MQ=255)
gCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAAt > 2:806743/1‑139 (MQ=255)
tAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTc > 2:463987/1‑83 (MQ=255)
tAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTc < 1:463987/83‑1 (MQ=255)
tAATTTTGCAGGCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCt < 2:227058/139‑1 (MQ=255)
gCCCATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAAttc > 1:47678/1‑139 (MQ=255)
cccATCTTCTGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAAttct < 1:357708/139‑1 (MQ=255)
tcttctGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTcgc < 1:1393062/139‑1 (MQ=255)
tcttctGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTcgc > 2:495348/1‑139 (MQ=255)
tcttctGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTcgc > 2:1393062/1‑139 (MQ=255)
cttctGAATCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTcgcg < 1:806743/139‑1 (MQ=255)
aaTCAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATcc > 2:373441/1‑139 (MQ=255)
cAGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATCCAGc > 1:110355/1‑139 (MQ=255)
aGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATc < 1:785273/134‑1 (MQ=255)
aGATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATc > 2:785273/1‑134 (MQ=255)
gATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATc > 1:1110600/1‑133 (MQ=255)
gATCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATc < 2:1110600/133‑1 (MQ=255)
aTCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGc > 2:255846/1‑71 (MQ=255)
aTCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGc < 1:255846/71‑1 (MQ=255)
aTCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATCCAGCTCa < 1:373441/139‑1 (MQ=255)
aTCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATCCAGCTCa < 2:1493643/139‑1 (MQ=255)
aTCAGGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATCCAGCTCa < 1:354303/139‑1 (MQ=255)
|
AGCATGATAAACCTGGGGTATCTGGCCTGGATCTCTTATTAACCGGGAGGGTTCTCCCTCCCGACACGGCTCAACCTTCTTCGCGGATCTGTGCTTGCAGATAATTTTGCAGGCCCATCTTCTGAATCAGATCAAGTTCCGTTTCCAGCCA‑‑‑‑‑GTCGATATGGCCTTCTTCATCACGCAAAATTTCTATCATCATATCGCGGCTGACGTAATCATGAACGCTATCGGCATAACCAATTGCCTCACGCAAATTCTTCGCGCCATCCAGCTCA > NC_000913/3466179‑3466447
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
