Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13141516 F55 I0 R1
|
152 |
392.1 |
11706698 |
99.5% |
11648164 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP006881 |
3,772,635 |
A→G |
11.3% |
Y334C (TAT→TGT) |
U712_19455 → |
Protein dltB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP006881 | 3,772,635 | 0 | A | G | 11.3%
| 1145.5
/ 130.2
| 427 | Y334C (TAT→TGT) | U712_19455 | Protein dltB |
| Reads supporting (aligned to +/- strand): ref base A (157/220); new base G (25/23); total (184/243) |
| Fisher's exact test for biased strand distribution p-value = 2.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 |
Only 100 of 443 total aligned reads displayed.
GTCATTTTGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGTTTT > CP006881/3772486‑3772784
|
aTTTTGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAatatat > 1:4497201/1‑150 (MQ=255)
ttGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCAt < 1:1340580/150‑1 (MQ=255)
tGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCAtt > 2:4998783/1‑150 (MQ=255)
ttCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTAc > 2:2554938/1‑150 (MQ=255)
cAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACgg > 2:1677433/1‑150 (MQ=255)
agagATTATGTGTTTATGAGATTCGTATTTTGTATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGc > 2:5251884/1‑150 (MQ=255)
agagATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGc > 1:2409790/1‑150 (MQ=255)
gagaTTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGcc < 2:59511/150‑1 (MQ=255)
tgtgTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCa > 2:1327452/1‑150 (MQ=255)
tttATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGcc < 2:1576333/150‑1 (MQ=255)
ttATGAGATTCTTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACCCCg < 1:489066/150‑1 (MQ=255)
ttATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCg < 2:723623/150‑1 (MQ=255)
aTGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGtt > 1:3652564/1‑150 (MQ=255)
tGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTc > 2:1465628/1‑150 (MQ=255)
gagaTTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCt < 2:218791/150‑1 (MQ=255)
gagaTTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCt > 1:278167/1‑150 (MQ=255)
gagaTTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCt < 1:1481474/150‑1 (MQ=255)
agaTTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCtg < 2:3394393/150‑1 (MQ=255)
gaTTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCtga < 1:594884/150‑1 (MQ=255)
tCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCtgatga < 1:1111633/150‑1 (MQ=255)
gTATTTTGGATGACTAAGAAAAAGTGGCTCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACg < 2:3276718/150‑1 (MQ=255)
aTTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACgtg > 2:5197622/1‑150 (MQ=255)
ttttGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACgtgt < 1:1155043/150‑1 (MQ=255)
tGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTAc < 2:1184413/150‑1 (MQ=255)
aTGACAAAGAAAAAGTGGAACAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAAc < 1:670182/150‑1 (MQ=255)
tGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACt > 1:1724538/1‑150 (MQ=255)
gACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGAGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTGACAACtt > 2:4468017/1‑150 (MQ=255)
cTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACtttt < 2:2407103/150‑1 (MQ=255)
cTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACtttt > 2:1053868/1‑150 (MQ=255)
aaaaaGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCgag < 2:3085885/150‑1 (MQ=255)
aaaaaGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCgag < 1:1681727/150‑1 (MQ=255)
aaaaaGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCgag > 2:4234899/1‑150 (MQ=255)
aaaaGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCgaga < 1:5126033/150‑1 (MQ=255)
aaaGTGGATTAAAAACCGTATGCCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGaa < 1:531390/150‑1 (MQ=255)
aaGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAg > 2:2111508/1‑150 (MQ=255)
aaGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAg > 1:4033821/1‑150 (MQ=255)
aGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGt > 1:1785648/1‑150 (MQ=255)
gTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTg < 1:5338316/150‑1 (MQ=255)
ggATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGa < 1:4143463/150‑1 (MQ=255)
tCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATa < 2:3801491/150‑1 (MQ=255)
cAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATaa > 2:3544814/1‑150 (MQ=255)
aaCCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGaaa > 2:4117035/1‑150 (MQ=255)
aCCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGACGCAATATATCATTTACGCCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAat < 1:2655106/150‑1 (MQ=255)
cGTATGGCCGTCACAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCTCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAatat < 1:716312/150‑1 (MQ=255)
gTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAAtata < 1:3220604/150‑1 (MQ=255)
gTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAAtata < 1:2303708/150‑1 (MQ=255)
tATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATaa < 1:920083/150‑1 (MQ=255)
tGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAAt > 2:2842532/1‑150 (MQ=255)
tGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAAt < 1:2874231/150‑1 (MQ=255)
ggCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATg < 2:2294526/150‑1 (MQ=255)
ggCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATg > 1:2469022/1‑150 (MQ=255)
gCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATgg < 1:843051/150‑1 (MQ=255)
gCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATgg < 1:541114/150‑1 (MQ=255)
gCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATgg > 2:1873409/1‑150 (MQ=255)
cGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCt < 1:5627742/150‑1 (MQ=255)
gTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTg < 2:415922/150‑1 (MQ=255)
ctcAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGcc < 2:1426775/150‑1 (MQ=255)
ctcAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGcc < 2:2020007/150‑1 (MQ=255)
cAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGt > 2:1265856/1‑150 (MQ=255)
aaaCATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTc > 2:538513/1‑150 (MQ=255)
tCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAAcc < 1:3286526/150‑1 (MQ=255)
gggTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGc > 2:3943724/1‑150 (MQ=255)
ggTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCt > 1:5786138/1‑150 (MQ=255)
ggTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCt < 1:3589556/150‑1 (MQ=255)
tATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTgg < 2:3667379/150‑1 (MQ=255)
tttCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGAc < 1:3477845/150‑1 (MQ=255)
tttCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGAc < 2:4540272/150‑1 (MQ=255)
tCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACaa < 1:1945353/150‑1 (MQ=255)
ccTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACCGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGACTGCCGTCCAACCGCTGGAAAAc > 1:5749554/1‑150 (MQ=255)
ctgctgTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAAcc < 1:1265856/150‑1 (MQ=255)
tgctgTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATGTATCATTTACGGCCTCTATCACGCCGTGCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCa < 1:1013476/150‑1 (MQ=255)
tgctgTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCa > 2:3231296/1‑150 (MQ=255)
gctgTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCAt < 2:3482285/150‑1 (MQ=255)
ctgTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCAtt < 1:3955217/150‑1 (MQ=255)
gTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATtct < 1:206175/150‑1 (MQ=255)
tttATGCTGATGGGGGTTTGGCTGGGGCTCGGGCCGCAATATATCATTTACGGCCACTACGACGCCGTTCTGATGACGTGTTACAACTTTTTCGTAAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATtctc < 1:3789666/150‑1 (MQ=255)
tttATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATtctc < 2:46108/150‑1 (MQ=255)
gCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTAt < 1:2258312/150‑1 (MQ=255)
tGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATtg > 2:925554/1‑150 (MQ=255)
tGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGa > 2:5538665/1‑150 (MQ=255)
gggggTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGAt < 2:3992191/150‑1 (MQ=255)
ggggTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTAACACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATc < 1:5005969/150‑1 (MQ=255)
gggTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATca < 1:3023379/150‑1 (MQ=255)
gggTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGATCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCACTATTGTGATca > 2:2714304/1‑150 (MQ=255)
cACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCAt < 2:1800231/150‑1 (MQ=255)
aCGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCAtt > 2:5302675/1‑150 (MQ=255)
aCGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAAAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCAtt > 1:464356/1‑150 (MQ=255)
gggCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTc < 2:3741533/150‑1 (MQ=255)
gggCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTc < 2:4330472/150‑1 (MQ=255)
gggCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTc < 2:2976887/150‑1 (MQ=255)
cTCGCGCCGCAATTTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCATCCAACCGCTGGACAACCATTCTGGCTATTGTGATCACATTCCATTTCGtt > 1:2567643/1‑150 (MQ=255)
cTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGtt < 2:5772367/150‑1 (MQ=255)
cgcgCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTg < 1:4260043/150‑1 (MQ=255)
ccgcAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTc > 2:833211/1‑150 (MQ=255)
ccgcAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTCCTTc > 1:4763795/1‑150 (MQ=255)
ccgcAATATATCATTTACGGCCCCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTc < 2:2491815/150‑1 (MQ=255)
aaTGTATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGt > 2:5590274/1‑150 (MQ=255)
aaTATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGt > 2:4851738/1‑150 (MQ=255)
aaTATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGt < 1:5041027/150‑1 (MQ=255)
atatCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGtttt > 1:1438002/1‑150 (MQ=255)
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GTCATTTTGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAATATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTTTTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGTTTT > CP006881/3772486‑3772784
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
