Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F394 I0 R1 1342 215.0 7134094 96.2% 6862998 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,399,210 G→T 100% S304* (TCA→TAA)  lrhA ← transcriptional repressor of flagellar, motility and chemotaxis genes

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,399,2100GT100.0% 587.0 / ‑6.7 180S304* (TCA→TAA) lrhAtranscriptional repressor of flagellar, motility and chemotaxis genes
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base T (79/100);  minor base A (1/0);  total (80/100)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 180 total aligned reads displayed.

TACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  >  CP009273/2399065‑2399354
                                                                                                                                                 |                                                                                                                                                
 aCGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTTCACTATTGTGTCAGGAATTATCTATCGTCCGTCGATTACGCGATATACCTTTCAATAAACAATTAat                                                                                                                                               >  1:2774977/1‑148 (MQ=255)
  ctttCTGAACTATGCGATGAAGTATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatc                                                                                                                                              <  2:1064972/146‑1 (MQ=255)
  cGTTCTGAACTATGCTATGAAGTATTTTAAAAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatc                                                                                                                                              <  1:1029266/148‑1 (MQ=255)
    ttCTGCACTATTCTATTAAGGATTTTTAATAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatcat                                                                                                                                            <  2:2406142/148‑1 (MQ=255)
    ttCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatcat                                                                                                                                            >  1:2348017/1‑148 (MQ=255)
       tGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                         <  2:3520042/148‑1 (MQ=255)
         cACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTGTCTCAGGCATTATCTAAAGTCCGTCGAGTACTCGATATCCCTTTAAAACAACAATAAATAATCCCCt                                                                                                                                       >  1:380942/1‑148 (MQ=255)
         cACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTGTCTCAGGAATTATCTATAGTCCGTCGATTACTCGAAATACCTTTCAATCAACAATTAATCATacccg                                                                                                                                       >  1:381066/1‑147 (MQ=255)
          aCTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATATATCGTCCGTCGATTACTCGATATACCTTTCAATCAACAATTAATCATCCCCtt                                                                                                                                      >  1:1787372/1‑148 (MQ=255)
            tATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTcc                                                                                                                                    >  1:2068350/1‑148 (MQ=255)
                   tGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGCTATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAg                                                                                                                             >  1:266637/1‑148 (MQ=255)
                   tGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAg                                                                                                                             <  2:2325694/148‑1 (MQ=255)
                       ggATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCAATAGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAt                                                                                                                         >  1:3219764/1‑148 (MQ=255)
                        taTTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAtt                                                                                                                        <  2:377923/147‑1 (MQ=255)
                          tttttACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAAATTgg                                                                                                                      <  1:3502634/148‑1 (MQ=255)
                           ttttAAAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTggg                                                                                                                     <  1:411293/148‑1 (MQ=255)
                            tttACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGc                                                                                                                    <  2:3557509/148‑1 (MQ=255)
                                 tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAt                                                                                                               <  2:208914/148‑1 (MQ=255)
                                   aaaaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTg                                                                                                             <  2:186273/148‑1 (MQ=255)
                                     aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGcc                                                                                                           <  2:1789051/148‑1 (MQ=255)
                                       aaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGTATTATCTTTCGTCCGTCGATTACTAGATATCCCTTTCAATCAACAATTAATAATACCCTTCCGGAGCAGACATTTGGCTGTATTGCCaa                                                                                                         >  2:1480632/1‑147 (MQ=255)
                                         aGCCGCTGGGGTTAAAAACACCCCCAGCGGCTAGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACgg                                                                                                       <  1:2161154/148‑1 (MQ=255)
                                           ccGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAt                                                                                                     >  1:257159/1‑148 (MQ=255)
                                            cGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAtt                                                                                                    <  2:3069668/148‑1 (MQ=255)
                                             gCTGGGGTTTAAACCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTa                                                                                                   <  1:334487/148‑1 (MQ=255)
                                              cTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTAt                                                                                                  <  1:245468/148‑1 (MQ=255)
                                               tGGTGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATg                                                                                                 <  2:2960186/148‑1 (MQ=255)
                                               tGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATg                                                                                                 <  2:1080588/148‑1 (MQ=255)
                                                 gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGGTGTATTGCCACGGATTATGGt                                                                                               >  1:2312198/1‑148 (MQ=255)
                                                 gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGt                                                                                               <  2:3125456/148‑1 (MQ=255)
                                                 gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGt                                                                                               <  2:426564/148‑1 (MQ=255)
                                                   gTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAg                                                                                             <  2:3523439/148‑1 (MQ=255)
                                                    tttAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGc                                                                                            <  1:2703254/148‑1 (MQ=255)
                                                       aaaaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGctct                                                                                         >  2:961506/1‑148 (MQ=255)
                                                         aaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTcc                                                                                       <  1:2404858/148‑1 (MQ=255)
                                                         aaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTcc                                                                                       <  1:719244/148‑1 (MQ=255)
                                                          acacCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCa                                                                                      <  1:1636276/148‑1 (MQ=255)
                                                            acCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATc                                                                                    >  2:2648826/1‑148 (MQ=255)
                                                              ccccAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGc                                                                                  <  1:2979552/148‑1 (MQ=255)
                                                               cccAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGcc                                                                                 <  2:3401896/148‑1 (MQ=255)
                                                                  aGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGa                                                                              <  1:961506/148‑1 (MQ=255)
                                                                  aGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGa                                                                              <  1:961498/148‑1 (MQ=255)
                                                                   gCGGCTCGTTTTTTACACGATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt                                                                             <  2:3346942/148‑1 (MQ=255)
                                                                    cGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATa                                                                            >  2:2063863/1‑148 (MQ=255)
                                                                       cTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGAt                                                                         >  1:1750511/1‑148 (MQ=255)
                                                                       cTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGAt                                                                         <  1:1238563/148‑1 (MQ=255)
                                                                         cGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCa                                                                       <  2:1259911/148‑1 (MQ=255)
                                                                          gTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAc                                                                      <  2:2516403/148‑1 (MQ=255)
                                                                           ttttttACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAcc                                                                     <  2:2208411/148‑1 (MQ=255)
                                                                           ttttttACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAcc                                                                     >  2:901645/1‑148 (MQ=255)
                                                                               ttACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTggg                                                                 <  2:1604090/148‑1 (MQ=255)
                                                                                 acacTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGcc                                                               <  2:1128319/148‑1 (MQ=255)
                                                                                 acacTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGcc                                                               <  2:1338630/148‑1 (MQ=255)
                                                                                       ttGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCGAGCTCa                                                         <  1:1040589/148‑1 (MQ=255)
                                                                                       ttGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCa                                                         <  2:1572729/148‑1 (MQ=255)
                                                                                        tGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCat                                                        <  1:2322351/148‑1 (MQ=255)
                                                                                          tctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCatta                                                      <  2:297904/148‑1 (MQ=255)
                                                                                           ctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCattat                                                     <  2:732353/148‑1 (MQ=255)
                                                                                            tcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCattatt                                                    <  1:1922156/148‑1 (MQ=255)
                                                                                             cAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCAttatta                                                   >  1:3377341/1‑148 (MQ=255)
                                                                                               ggAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACt                                                 <  2:2989382/148‑1 (MQ=255)
                                                                                                gAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTg                                                >  2:2927627/1‑148 (MQ=255)
                                                                                                  aTTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGa                                              >  1:2635111/1‑148 (MQ=255)
                                                                                                   ttATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGAc                                             >  2:3150590/1‑148 (MQ=255)
                                                                                                   ttATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGAc                                             >  2:17337/1‑148 (MQ=255)
                                                                                                    tatctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACg                                            >  1:3023071/1‑148 (MQ=255)
                                                                                                    tatctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACg                                            >  1:1857414/1‑148 (MQ=255)
                                                                                                       ctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGAt                                         >  2:313729/1‑148 (MQ=255)
                                                                                                       ctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGAt                                         <  1:1925931/148‑1 (MQ=255)
                                                                                                        tatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATc                                        >  2:1394941/1‑148 (MQ=255)
                                                                                                        tatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATc                                        >  2:2462175/1‑148 (MQ=255)
                                                                                                        tatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATc                                        <  1:286604/148‑1 (MQ=255)
                                                                                                        tatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATc                                        >  2:2462271/1‑148 (MQ=255)
                                                                                                         atcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCa                                       >  2:803690/1‑148 (MQ=255)
                                                                                                          tcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAt                                      <  2:3455794/148‑1 (MQ=255)
                                                                                                            gtccgtcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAg                                    <  1:1528933/148‑1 (MQ=255)
                                                                                                              ccgtcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGca                                  <  2:3181079/148‑1 (MQ=255)
                                                                                                                 tcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAg                               <  2:2348017/148‑1 (MQ=255)
                                                                                                                 tcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAg                               <  2:3270120/148‑1 (MQ=255)
                                                                                                                   gATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCa                             <  1:1113843/148‑1 (MQ=255)
                                                                                                                    aTTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaa                            >  2:1205522/1‑148 (MQ=255)
                                                                                                                     ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaaa                           >  2:3266579/1‑148 (MQ=255)
                                                                                                                     ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaaa                           >  2:1968687/1‑148 (MQ=255)
                                                                                                                     ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaaa                           <  1:3309968/148‑1 (MQ=255)
                                                                                                                         tCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATAtt                       <  1:3133342/148‑1 (MQ=255)
                                                                                                                              atCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTa                  <  1:2001301/148‑1 (MQ=255)
                                                                                                                              atCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTa                  <  1:199401/148‑1 (MQ=255)
                                                                                                                              atCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTa                  >  2:1023201/1‑148 (MQ=255)
                                                                                                                                cccTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATc                >  2:1858370/1‑148 (MQ=255)
                                                                                                                                 ccTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCa               <  2:759772/148‑1 (MQ=255)
                                                                                                                                  cTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAg              >  1:2703367/1‑148 (MQ=255)
                                                                                                                                  cTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAg              >  1:431546/1‑148 (MQ=255)
                                                                                                                                   tttCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAgg             >  2:2956462/1‑148 (MQ=255)
                                                                                                                                   tttCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATAGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAgg             <  1:876353/148‑1 (MQ=255)
                                                                                                                                    ttCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGt            <  1:2370250/148‑1 (MQ=255)
                                                                                                                                     tcaatcaaCAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTa           >  2:2760572/1‑148 (MQ=255)
                                                                                                                                             caaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGt   >  1:1890886/1‑148 (MQ=255)
                                                                                                                                             caaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGt   >  1:2526478/1‑148 (MQ=255)
                                                                                                                                             caaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGt   >  2:3225701/1‑148 (MQ=255)
                                                                                                                                              aaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTa  <  1:781677/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
TACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  >  CP009273/2399065‑2399354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCA  >  CP009273/2399063‑2399359
                                                                                                                                                   |                                                                                                                                                     
TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACAATTGTCTCAGGAATTATCTATCGTCCCTCGATTACTCGATATCCCTTTCAATCAACAATTAA                                                                                                                                                     >  SRR19973066.2485674/1‑150 (MQ=60)
 ttagtttatgcaataggctttcaagtttttttaaaAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAAT                                                                                                                                                    <  SRR19973066.159841/115‑1 (MQ=60)
 gttcgtgctgaactgtggttttttgttttttaagTAAAAAAAAGCCGCTGGGGTATAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAAT                                                                                                                                                    <  SRR19973066.2457447/116‑1 (MQ=60)
 GTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTTCACTATTGTGTCAGGAATTATCTATCGTCCGTCGATTACGCGATATACCTTTCAATAAACAATTAAT                                                                                                                                                    >  SRR19973066.2793659/1‑150 (MQ=60)
    CGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCAT                                                                                                                                                 >  SRR19973066.2363982/1‑150 (MQ=60)
    CGTTCTGAACTATGCTATGAAGTATTTTAAAAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCAT                                                                                                                                                 <  SRR19973066.1036846/150‑1 (MQ=60)
         TGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCT                                                                                                                                            <  SRR19973066.801232/150‑1 (MQ=60)
         TGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTGTCTCAGGCATTATCTAAAGTCCGTCGAGTACTCGATATCCCTTTAAAACAACAATAAATAATCCCCT                                                                                                                                            >  SRR19973066.383944/1‑150 (MQ=60)
         TGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTGTCTCAGGAATTATCTATAGTCCGTCGATTACTCGAAATACCTTTCAATCAACAATTAATCATacccg                                                                                                                                            >  SRR19973066.384070/1‑145 (MQ=60)
          gaattatgcttttatttatttttaaaAAAAAAACGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTT                                                                                                                                           <  SRR19973066.3319462/124‑1 (MQ=60)
          gaactatgctattaattttttttaaaAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTT                                                                                                                                           <  SRR19973066.452418/124‑1 (MQ=60)
          GCACTATGCGATGAAGTATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTT                                                                                                                                           <  SRR19973066.2616876/150‑1 (MQ=60)
          GCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATACCTTTCAATCAAAAATTAATAATCCCCTT                                                                                                                                           >  SRR19973066.1800079/1‑150 (MQ=60)
          GCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATATATCGTCCGTCGATTACTCGATATACCTTTCAATCAACAATTAATCATCCCCTT                                                                                                                                           >  SRR19973066.1800117/1‑150 (MQ=60)
            ACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCC                                                                                                                                         >  SRR19973066.2082668/1‑150 (MQ=60)
                TGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAG                                                                                                                                     >  SRR19973066.2671162/1‑150 (MQ=60)
                   GATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGCTATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAG                                                                                                                                  >  SRR19973066.268627/1‑150 (MQ=60)
                       AAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCAATAGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAT                                                                                                                              >  SRR19973066.3241069/1‑150 (MQ=60)
                           ATTTTAACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGG                                                                                                                          <  SRR19973066.1825527/150‑1 (MQ=60)
                            TTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAAATTGGGC                                                                                                                         <  SRR19973066.3525985/150‑1 (MQ=60)
                             TTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCT                                                                                                                        <  SRR19973066.414440/150‑1 (MQ=60)
                             TTTTAATAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCT                                                                                                                        <  SRR19973066.3586601/150‑1 (MQ=60)
                             TTTTAAAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCT                                                                                                                        <  SRR19973066.414514/150‑1 (MQ=60)
                                           AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTTTCTCAGGAATTATCTATCGTCCGTCGCTTTCTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTCCGGAGCAGACATTGGGCTGGATTTCCACGGAT                                                                                                          >  SRR19973066.259057/1‑150 (MQ=60)
                                           AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAT                                                                                                          >  SRR19973066.259106/1‑150 (MQ=60)
                                           AGCCGCTGGGGTTAAAAACACCCCCAGCGGCTAGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAT                                                                                                          <  SRR19973066.2176169/150‑1 (MQ=60)
                                               GCTGGGGTTTAAACCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATG                                                                                                      <  SRR19973066.337051/150‑1 (MQ=60)
                                                CTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGG                                                                                                     <  SRR19973066.247374/150‑1 (MQ=60)
                                                 TGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGGTGTATTGCCACGGATTATGGT                                                                                                    >  SRR19973066.2328017/1‑150 (MQ=60)
                                                 TGGGGTTTAAAACACCCCCAGCGGCTCGTTTTGTACACTATTTTGTCAGGCATTATATATCGTCCGTCGATTACTCGATATCCCGTTCAATAAACAAATAATAATCCCCATCCGGGGCCGACAATTGGCTGTATTGACACGGATTATGGT                                                                                                    >  SRR19973066.949482/1‑150 (MQ=60)
                                                    GGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAAATATCTATCGTCCGGCGATTACGCGATATACCATTCAATCAACAATTAATAAACCCCGTACGGAGCCGACAATGGGGTGGATTGCCCCGGATTATGGTAGC                                                                                                 >  SRR19973066.3442311/1‑150 (MQ=60)
                                                     GTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTTTCTCAGGAATTATATATCGTACGTCGATTACTCGATATCCCATTCAAAAAACAAATAATAAAACCCTTCCGGAGCACACAATTGGCTGTATTGCCACGGATTATGGTATCT                                                                                                >  SRR19973066.1430041/1‑150 (MQ=60)
                                                      TTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTC                                                                                               <  SRR19973066.2721435/150‑1 (MQ=60)
                                                      TTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTC                                                                                               <  SRR19973066.2721359/150‑1 (MQ=60)
                                                         AAAACACCCCCAGCGGCTCGTTTTTTAAACGATTGTGTCAGGAATTATATATAGTCCGTCGATTACTCGATATCCCTTTCAATAAACAATTAATCATCCCCTTCCGGAGCAGACAATGGGCTGTATTTCCACGGATTATTGTAGCTCTCC                                                                                            >  SRR19973066.1416440/1‑150 (MQ=60)
                                                           AACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCAT                                                                                          <  SRR19973066.2421117/150‑1 (MQ=60)
                                                           AACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCAT                                                                                          <  SRR19973066.724564/150‑1 (MQ=60)
                                                           AACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCAT                                                                                          <  SRR19973066.722985/150‑1 (MQ=60)
                                                            ACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATC                                                                                         <  SRR19973066.1648171/150‑1 (MQ=60)
                                                                CCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCT                                                                                     <  SRR19973066.2999231/150‑1 (MQ=60)
                                                                    AGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATA                                                                                 <  SRR19973066.968550/150‑1 (MQ=60)
                                                                    AGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATA                                                                                 <  SRR19973066.968558/150‑1 (MQ=60)
                                                                       GGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGAT                                                                              >  SRR19973066.1763106/1‑150 (MQ=60)
                                                                         CTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCA                                                                            <  SRR19973066.1247396/150‑1 (MQ=60)
                                                                          TCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAC                                                                           <  SRR19973066.2128483/150‑1 (MQ=60)
                                                                             TTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTG                                                                        <  SRR19973066.2396896/150‑1 (MQ=60)
                                                                                    CACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGC                                                                 >  SRR19973066.2757341/1‑150 (MQ=60)
                                                                                    CACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGC                                                                 >  SRR19973066.975642/1‑150 (MQ=60)
                                                                                         TTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCGAGCTCATT                                                            <  SRR19973066.1048244/150‑1 (MQ=60)
                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                           <  SRR19973066.909084/150‑1 (MQ=60)
                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                           <  SRR19973066.2338215/150‑1 (MQ=60)
                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                           <  SRR19973066.2338122/150‑1 (MQ=60)
                                                                                             CTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTA                                                        >  SRR19973066.3399865/1‑150 (MQ=60)
                                                                                             CTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTA                                                        >  SRR19973066.2954445/1‑150 (MQ=60)
                                                                                              TCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTAC                                                       <  SRR19973066.1935826/150‑1 (MQ=60)
                                                                                                AGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTG                                                     >  SRR19973066.3316294/1‑150 (MQ=60)
                                                                                                  GAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGA                                                   >  SRR19973066.2652854/1‑150 (MQ=60)
                                                                                                    ATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACG                                                 >  SRR19973066.1870699/1‑150 (MQ=60)
                                                                                                    ATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACG                                                 >  SRR19973066.3043241/1‑150 (MQ=60)
                                                                                                        TCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATC                                             <  SRR19973066.774438/150‑1 (MQ=60)
                                                                                                         CTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCA                                            <  SRR19973066.1939961/150‑1 (MQ=60)
                                                                                                         CTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCA                                            <  SRR19973066.1939626/150‑1 (MQ=60)
                                                                                                          TATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAT                                           <  SRR19973066.288671/150‑1 (MQ=60)
                                                                                                          TATCGTCCGTCGATTACTCGATATCCCATTCAATCAACAATTACTCATCCCCTTCCGGAGCAGACATTGGGCTGTTTTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAT                                           <  SRR19973066.287960/150‑1 (MQ=60)
                                                                                                           ATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATA                                          >  SRR19973066.2008488/1‑150 (MQ=60)
                                                                                                              GTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCA                                       <  SRR19973066.1539784/150‑1 (MQ=60)
                                                                                                                     GATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAA                                <  SRR19973066.1121885/150‑1 (MQ=60)
                                                                                                                       TTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATA                              <  SRR19973066.3331919/150‑1 (MQ=60)
                                                                                                                          CTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTC                           >  SRR19973066.3399465/1‑150 (MQ=60)
                                                                                                                           TCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCG                          <  SRR19973066.3154255/150‑1 (MQ=60)
                                                                                                                             GATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGT                        >  SRR19973066.1059121/1‑150 (MQ=60)
                                                                                                                              ATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTA                       <  SRR19973066.2343191/150‑1 (MQ=60)
                                                                                                                               TATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAT                      <  SRR19973066.1203021/150‑1 (MQ=60)
                                                                                                                               TATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAT                      >  SRR19973066.1588394/1‑150 (MQ=60)
                                                                                                                                ATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATC                     <  SRR19973066.2015361/150‑1 (MQ=60)
                                                                                                                                ATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATC                     <  SRR19973066.2042810/150‑1 (MQ=60)
                                                                                                                                ATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATC                     <  SRR19973066.201100/150‑1 (MQ=60)
                                                                                                                                  CCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAG                   >  SRR19973066.434887/1‑150 (MQ=60)
                                                                                                                                  CCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAG                   >  SRR19973066.2721474/1‑150 (MQ=60)
                                                                                                                                   CCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGG                  <  SRR19973066.3162601/150‑1 (MQ=60)
                                                                                                                                     TTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATAGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTA                <  SRR19973066.882605/150‑1 (MQ=60)
                                                                                                                                      TTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAG               <  SRR19973066.2386277/150‑1 (MQ=60)
                                                                                                                                      TTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAG               <  SRR19973066.2385310/150‑1 (MQ=60)
                                                                                                                                             AACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT        >  SRR19973066.2543657/1‑150 (MQ=60)
                                                                                                                                             AACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT        >  SRR19973066.1904366/1‑150 (MQ=60)
                                                                                                                                             AACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT        >  SRR19973066.1905035/1‑150 (MQ=60)
                                                                                                                                             AACAATTAATAATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT        <  SRR19973066.1892753/150‑1 (MQ=60)
                                                                                                                                             AACAATTAATAATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT        <  SRR19973066.3099445/150‑1 (MQ=60)
                                                                                                                                               CAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAA      >  SRR19973066.522736/1‑150 (MQ=60)
                                                                                                                                                AATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG     <  SRR19973066.787446/150‑1 (MQ=60)
                                                                                                                                                AATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG     >  SRR19973066.2871157/1‑150 (MQ=60)
                                                                                                                                                AATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG     >  SRR19973066.2871164/1‑150 (MQ=60)
                                                                                                                                                   TAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCA  <  SRR19973066.1795220/150‑1 (MQ=60)
                                                                                                                                                   |                                                                                                                                                     
TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCA  >  CP009273/2399063‑2399359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑