Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F434 I0 R1 1130 215.9 7031662 97.1% 6827743 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,399,210 G→T 100% S304* (TCA→TAA)  lrhA ← transcriptional repressor of flagellar, motility and chemotaxis genes

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,399,2100GT100.0% 625.5 / NA 191S304* (TCA→TAA) lrhAtranscriptional repressor of flagellar, motility and chemotaxis genes
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (84/107);  total (84/107)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 191 total aligned reads displayed.

TACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  >  CP009273/2399065‑2399354
                                                                                                                                                 |                                                                                                                                                
tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTaa                                                                                                                                                >  1:550766/1‑148 (MQ=255)
  cGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGGTATCCCTTTCAATCAACAATTAatc                                                                                                                                              >  1:1930053/1‑148 (MQ=255)
   gTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatca                                                                                                                                             <  1:264144/148‑1 (MQ=255)
    ttCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatcat                                                                                                                                            >  2:1713173/1‑148 (MQ=255)
    ttCTGCACTATGCGATGAAGGATTTTTACAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatcat                                                                                                                                            <  2:415564/148‑1 (MQ=255)
     tCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTCTCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAatcatc                                                                                                                                           >  2:1985063/1‑148 (MQ=255)
       tGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                         <  2:3127796/148‑1 (MQ=255)
        gCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATACCATTAAATCAACAAATAATCAAcccc                                                                                                                                        >  1:3454366/1‑148 (MQ=255)
          aCTATGCGATGACTGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCtt                                                                                                                                      <  1:775506/148‑1 (MQ=255)
           cTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTGAATCAACAATTAATCATCCCCTTc                                                                                                                                     >  2:2409955/1‑148 (MQ=255)
              tGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGATTGTGTCAGGAATTATATATCGTCCGTCGATTACTCGATATACCTTTGAATCAACAAATAATAATCCCCGTCCgg                                                                                                                                  >  1:3299697/1‑148 (MQ=255)
                   tGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGCGCAg                                                                                                                             >  2:2692004/1‑148 (MQ=255)
                    gAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTGCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGa                                                                                                                            >  2:1539006/1‑148 (MQ=255)
                    gAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCGCGTTTTTTAGACTATTTTCTCAGGAATTATCTATCGTCCGGCGATTTCTCGATATCCCATTAAATCAACAAATAATCATACCCTTCCGGAGCAGa                                                                                                                            >  1:2777567/1‑148 (MQ=255)
                     aaGTATTTTAAAAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAc                                                                                                                           <  1:1009467/148‑1 (MQ=255)
                     aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTTTGTCAGGAATTATATATCGTCCGTCGATTAATCGATATCCCTTTCAATAAACAATTAATAATCCCCGTCCCGAGCAGAc                                                                                                                           >  1:786242/1‑148 (MQ=255)
                       ggATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAt                                                                                                                         <  2:1608802/148‑1 (MQ=255)
                       ggATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAt                                                                                                                         >  1:3186789/1‑148 (MQ=255)
                         aTTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAGTCGATATCCCTTTCAAGCCACAATTAATCATCCCCGTCCGGGGCAGACATTg                                                                                                                       >  1:3479724/1‑148 (MQ=255)
                           ttttACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTggg                                                                                                                     <  2:2295664/148‑1 (MQ=255)
                                 tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAt                                                                                                               <  2:876756/148‑1 (MQ=255)
                                    aaaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCCATCAACAAGTAATCATCCCCTTCCGGCGCAGACATTGGGCTGTATTGc                                                                                                            >  2:656536/1‑148 (MQ=255)
                                    aaaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATGCCCTTCCGGAGCAGACATTGGGCTGTATTGc                                                                                                            >  1:1162185/1‑148 (MQ=255)
                                    aaaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTCCGGAGCAGACATTGGGGTGTAtttc                                                                                                            >  1:2913543/1‑146 (MQ=255)
                                     aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGcc                                                                                                           <  2:517110/148‑1 (MQ=255)
                                     aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGcc                                                                                                           <  1:1636209/148‑1 (MQ=255)
                                     aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGcc                                                                                                           <  1:3376551/148‑1 (MQ=255)
                                             gCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTa                                                                                                   >  1:1751627/1‑148 (MQ=255)
                                              cTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTAt                                                                                                  >  2:435105/1‑148 (MQ=255)
                                               tGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATg                                                                                                 <  2:1847620/148‑1 (MQ=255)
                                                ggggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATgg                                                                                                <  1:1091005/148‑1 (MQ=255)
                                                ggggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACAATTTTCTCAGGAATTATCTATCGTACGTCGATTACTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTACGGAGCAGACATTGGGCTGTATTGCCACGGATTATgg                                                                                                >  1:3510977/1‑148 (MQ=255)
                                                 gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTCTTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGt                                                                                               <  2:1297706/148‑1 (MQ=255)
                                                 gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGt                                                                                               <  1:2345554/148‑1 (MQ=255)
                                                 gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGt                                                                                               >  2:2887133/1‑148 (MQ=255)
                                                  ggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTa                                                                                              <  2:2988965/148‑1 (MQ=255)
                                                   gTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAg                                                                                             <  2:550766/148‑1 (MQ=255)
                                                   gTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAg                                                                                             <  2:2044306/148‑1 (MQ=255)
                                                   gTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAg                                                                                             <  2:2633361/148‑1 (MQ=255)
                                                           cacCCCCAGCGGCTCGTTTTTTACACAATTTTCTCAGGAATTATATATCGTCCGTCGATTACTCGATATCCCTTTCAATAAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCAt                                                                                     >  1:2604849/1‑148 (MQ=255)
                                                                   gCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt                                                                             >  2:861503/1‑148 (MQ=255)
                                                                   gCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt                                                                             <  2:2701128/148‑1 (MQ=255)
                                                                   gCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt                                                                             >  2:1249176/1‑148 (MQ=255)
                                                                   gCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt                                                                             <  2:2370569/148‑1 (MQ=255)
                                                                    cGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATa                                                                            <  1:3450579/148‑1 (MQ=255)
                                                                     ggCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAg                                                                           <  2:2577232/148‑1 (MQ=255)
                                                                      gCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGa                                                                          <  2:1648995/148‑1 (MQ=255)
                                                                       cTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGAt                                                                         <  2:1143291/148‑1 (MQ=255)
                                                                        tCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATc                                                                        <  1:2279828/148‑1 (MQ=255)
                                                                          gTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAc                                                                      <  2:2179183/148‑1 (MQ=255)
                                                                           ttttttACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAcc                                                                     >  1:452409/1‑148 (MQ=255)
                                                                                tACACTATTGTCTCATGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGc                                                                <  2:2844820/148‑1 (MQ=255)
                                                                                tACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGc                                                                <  1:3205200/148‑1 (MQ=255)
                                                                                tACACTATTGTCTCAGGAATTATCTATCGTCCGTAGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGc                                                                <  2:2897731/148‑1 (MQ=255)
                                                                                 acacTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGcc                                                               <  1:1713173/148‑1 (MQ=255)
                                                                                   acTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAg                                                             <  1:2167928/148‑1 (MQ=255)
                                                                                        tGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCat                                                        >  2:700811/1‑148 (MQ=255)
                                                                                         gTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCatt                                                       <  1:2760766/148‑1 (MQ=255)
                                                                                          tctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCatta                                                      >  1:3000021/1‑148 (MQ=255)
                                                                                          tctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCatta                                                      <  2:1916510/148‑1 (MQ=255)
                                                                                           ctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCattat                                                     <  2:3397001/148‑1 (MQ=255)
                                                                                             cAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCAttatta                                                   >  1:2689434/1‑148 (MQ=255)
                                                                                             cAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCAttatta                                                   <  1:2533300/148‑1 (MQ=255)
                                                                                                 aaTTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTgg                                               >  1:1525724/1‑148 (MQ=255)
                                                                                                  aTTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGa                                              >  1:1049162/1‑148 (MQ=255)
                                                                                                    tatctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACg                                            >  1:886378/1‑148 (MQ=255)
                                                                                                     atctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACgg                                           >  2:1630713/1‑148 (MQ=255)
                                                                                                         atcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCa                                       <  1:1181973/148‑1 (MQ=255)
                                                                                                         atcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCa                                       <  2:855678/148‑1 (MQ=255)
                                                                                                          tcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAt                                      >  2:2289522/1‑148 (MQ=255)
                                                                                                                  cGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGc                              >  1:1568434/1‑148 (MQ=255)
                                                                                                                    aTTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaa                            <  2:1391259/148‑1 (MQ=255)
                                                                                                                     ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaaa                           >  2:1223302/1‑148 (MQ=255)
                                                                                                                      tACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAat                          >  2:1378123/1‑148 (MQ=255)
                                                                                                                      tACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAat                          <  2:501144/148‑1 (MQ=255)
                                                                                                                       aCTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAata                         <  2:361133/148‑1 (MQ=255)
                                                                                                                       aCTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAata                         <  2:2689325/148‑1 (MQ=255)
                                                                                                                       aCTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAata                         <  2:2209890/148‑1 (MQ=255)
                                                                                                                        cTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAatat                        >  2:1813521/1‑148 (MQ=255)
                                                                                                                         tCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAACTAtt                       <  2:1113996/148‑1 (MQ=255)
                                                                                                                            atatCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCgg                    <  2:61012/148‑1 (MQ=255)
                                                                                                                             tatCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGt                   >  1:384329/1‑148 (MQ=255)
                                                                                                                             tatCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGt                   <  1:2826014/148‑1 (MQ=255)
                                                                                                                             tatCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGt                   <  1:1580937/148‑1 (MQ=255)
                                                                                                                              atCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTa                  >  2:1001078/1‑148 (MQ=255)
                                                                                                                               tCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAt                 <  2:3444590/148‑1 (MQ=255)
                                                                                                                               tCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAt                 <  2:2302099/148‑1 (MQ=255)
                                                                                                                                cccTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATc                >  2:90058/1‑148 (MQ=255)
                                                                                                                                  cTTTCAATCAACAATTAATCATCCCGTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAg              <  2:2777567/148‑1 (MQ=255)
                                                                                                                                  cTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAg              >  2:3306744/1‑148 (MQ=255)
                                                                                                                                  cTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAg              >  1:1032541/1‑148 (MQ=255)
                                                                                                                                   tttCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAgg             <  2:3299158/148‑1 (MQ=255)
                                                                                                                                   tttCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAgg             <  1:1338665/148‑1 (MQ=255)
                                                                                                                                        atcaaCAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAgcg        >  1:3053075/1‑148 (MQ=255)
                                                                                                                                         tcaaCAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAgcgg       >  1:355533/1‑148 (MQ=255)
                                                                                                                                            acaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTCGcggcgg    >  2:2557253/1‑148 (MQ=255)
                                                                                                                                            acaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGcggcgg    <  2:2604860/148‑1 (MQ=255)
                                                                                                                                             caaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGt   >  1:2973643/1‑148 (MQ=255)
                                                                                                                                              aaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTa  <  1:813426/148‑1 (MQ=255)
                                                                                                                                              aaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTa  <  1:1985063/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
TACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  >  CP009273/2399065‑2399354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG  >  CP009273/2399061‑2399356
                                                                                                                                                     |                                                                                                                                                  
TTTGTACGTTCTGAACTATGCTATGAAGGATTTTAAATAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATT                                                                                                                                                    <  SRR19973065.2843539/150‑1 (MQ=60)
 TTGTACGTTCTGCACTATGCTATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTA                                                                                                                                                   <  SRR19973065.3529026/150‑1 (MQ=60)
 TTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTTTCTCAGGAATTATCTATAGTCCGTCGATTACTGGATATACCTTTCAATCAACAATTA                                                                                                                                                   >  SRR19973065.363666/1‑150 (MQ=60)
 TTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTA                                                                                                                                                   >  SRR19973065.3533760/1‑150 (MQ=60)
  TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCGGGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAA                                                                                                                                                  >  SRR19973065.554308/1‑150 (MQ=60)
    TACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGGTATCCCTTTCAATCAACAATTAATC                                                                                                                                                >  SRR19973065.1942696/1‑150 (MQ=60)
      CGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCAT                                                                                                                                              >  SRR19973065.1470035/1‑150 (MQ=60)
       GTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATC                                                                                                                                             <  SRR19973065.265955/150‑1 (MQ=60)
          CTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATACCATTAAATCAACAAATAATCAACCCC                                                                                                                                          >  SRR19973065.3475422/1‑150 (MQ=60)
            GCACTATGCGATGAAGTATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTT                                                                                                                                        <  SRR19973065.826385/150‑1 (MQ=60)
              ACTATGCGATGACTGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCC                                                                                                                                      <  SRR19973065.780658/150‑1 (MQ=60)
                TATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGATTGTGTCAGGAATTATATATCGTCCGTCGATTACTCGATATACCTTTGAATCAACAAATAATAATCCCCGTCCGG                                                                                                                                    >  SRR19973065.3319796/1‑150 (MQ=60)
                 ATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACAATTGTCTCAGGAATTATATATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGA                                                                                                                                   >  SRR19973065.543572/1‑150 (MQ=60)
                      ATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCGCGTTTTTTAGACTATTTTCTCAGGAATTATCTATCGTCCGGCGATTTCTCGATATCCCATTAAATCAACAAATAATCATACCCTTCCGGAGCAGA                                                                                                                              >  SRR19973065.2794805/1‑150 (MQ=60)
                       TGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTTTGTCAGGAATTATATATCGTCCGTCGATTAATCGATATCCCTTTCAATAAACAATTAATAATCCCCGTCCCGAGCAGAC                                                                                                                             >  SRR19973065.791454/1‑150 (MQ=60)
                         aagtattttaaaaAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAT                                                                                                                           <  SRR19973065.1016161/137‑1 (MQ=60)
                         AAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAT                                                                                                                           >  SRR19973065.3206023/1‑150 (MQ=60)
                           GGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAGTCGATATCCCTTTCAAGCCACAATTAATCATCCCCGTCCGGGGCAGACATTG                                                                                                                         >  SRR19973065.3500901/1‑150 (MQ=60)
                                      AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATGCCCTTCCGGAGCAGACATTGGGCTGTATTGC                                                                                                              >  SRR19973065.1169622/1‑150 (MQ=60)
                                      AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGC                                                                                                              <  SRR19973065.653189/150‑1 (MQ=60)
                                      AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTCCGGAGCAGACATTGGGGTGTATTTC                                                                                                              >  SRR19973065.2931269/1‑150 (MQ=60)
                                       AAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGATTGTCTCAGGAATTATCTATAGTCCGTCGATTACTCGATATCCCTTTCAATAAACAAATAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTTCC                                                                                                             >  SRR19973065.1904362/1‑150 (MQ=60)
                                         AAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCAC                                                                                                           <  SRR19973065.3397198/150‑1 (MQ=60)
                                         AAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCAC                                                                                                           <  SRR19973065.1647197/150‑1 (MQ=60)
                                         AAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCAC                                                                                                           <  SRR19973065.1646868/150‑1 (MQ=60)
                                            AAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGA                                                                                                        >  SRR19973065.3485252/1‑150 (MQ=60)
                                             AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAT                                                                                                       <  SRR19973065.438669/150‑1 (MQ=60)
                                             AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAT                                                                                                       <  SRR19973065.293762/150‑1 (MQ=60)
                                               CCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTA                                                                                                     >  SRR19973065.1763159/1‑150 (MQ=60)
                                                  CTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACAATTTTCTCAGGAATTATCTATCGTACGTCGATTACTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTACGGAGCAGACATTGGGCTGTATTTCCACGGATTATTG                                                                                                  >  SRR19973065.3532271/1‑150 (MQ=60)
                                                    GGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTA                                                                                                <  SRR19973065.1098193/150‑1 (MQ=60)
                                                     GGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAG                                                                                               <  SRR19973065.2360059/150‑1 (MQ=60)
                                                     GGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAG                                                                                               <  SRR19973065.2360182/150‑1 (MQ=60)
                                                        TTTAAAACACCCCCAGCGGCTCGTTTTTTTCACTATTGTGTCAGGAAATATCTATCGTCCGTCGATTACTAGAAATACCATTAAAAAAACAATTAATAAACCCCATCCGGAGCCGACAATTGGCGGTATTGCCACGGGTTATGGTAGCTC                                                                                            >  SRR19973065.358246/1‑150 (MQ=45)
                                                           AAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCC                                                                                         <  SRR19973065.2271350/150‑1 (MQ=60)
                                                           AAAACACCCCCAGCGGCTCGTTTTTTACACGAATGTCTCAGGAATTATATATAGTCCGTCGATTAATCGATAAACCTTTAAATCAACAATTAATCAACCCCTTCCGGAGCAGACATTGGGCTGTATTGCCCCGGATTATGGTAGCTCTCC                                                                                         >  SRR19973065.1273020/1‑150 (MQ=60)
                                                             AACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATATATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAAATAATCATCCCCTTCCCGAGCAGACATTGGGCTGTATTTCCACGGATTATGGTATCTCTCCAT                                                                                       >  SRR19973065.2621029/1‑150 (MQ=60)
                                                             AACACCCCCAGCGGCTCGTTTTTTACACAATTTTCTCAGGAATTATATATCGTCCGTCGATTACTCGATATCCCTTTCAATAAACAATTAAACATCCCCTTCCGGAGCAGACATTGGGCTGTATTTCCACGGATTATGGTAGCTCTCCAA                                                                                       >  SRR19973065.2621018/1‑150 (MQ=60)
                                                              ACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATC                                                                                      <  SRR19973065.3522334/150‑1 (MQ=60)
                                                                        CGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGA                                                                            <  SRR19973065.3471619/150‑1 (MQ=60)
                                                                            TCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAC                                                                        <  SRR19973065.2294209/150‑1 (MQ=60)
                                                                             CGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                       <  SRR19973065.3182346/150‑1 (MQ=60)
                                                                             CGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                       >  SRR19973065.455543/1‑150 (MQ=60)
                                                                                TTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGG                                                                    <  SRR19973065.1992745/150‑1 (MQ=60)
                                                                                    TACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCA                                                                <  SRR19973065.3224493/150‑1 (MQ=60)
                                                                                    TACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCA                                                                <  SRR19973065.3224488/150‑1 (MQ=60)
                                                                                     ACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAG                                                               >  SRR19973065.3413172/1‑150 (MQ=60)
                                                                                     ACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAG                                                               <  SRR19973065.1724566/150‑1 (MQ=60)
                                                                                       ACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCT                                                             <  SRR19973065.2181852/150‑1 (MQ=60)
                                                                                           TTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATT                                                         <  SRR19973065.788127/150‑1 (MQ=60)
                                                                                            TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                        >  SRR19973065.3017745/1‑150 (MQ=60)
                                                                                            TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                        >  SRR19973065.3018400/1‑150 (MQ=60)
                                                                                             GTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTAT                                                       <  SRR19973065.3328571/150‑1 (MQ=60)
                                                                                             GTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTAT                                                       <  SRR19973065.2777928/150‑1 (MQ=60)
                                                                                             GTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTAT                                                       <  SRR19973065.110820/150‑1 (MQ=60)
                                                                                             GTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTAT                                                       <  SRR19973065.2777921/150‑1 (MQ=60)
                                                                                             GTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTAT                                                       <  SRR19973065.1171915/150‑1 (MQ=60)
                                                                                              TCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAGTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATT                                                      <  SRR19973065.3257425/150‑1 (MQ=60)
                                                                                               CTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTA                                                     >  SRR19973065.2706130/1‑150 (MQ=60)
                                                                                               CTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTA                                                     >  SRR19973065.2706020/1‑150 (MQ=60)
                                                                                                TCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTAC                                                    <  SRR19973065.1702160/150‑1 (MQ=60)
                                                                                                 CAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACT                                                   <  SRR19973065.2549200/150‑1 (MQ=60)
                                                                                                  AGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCACTCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTG                                                  <  SRR19973065.2810835/150‑1 (MQ=60)
                                                                                                   GGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGG                                                 >  SRR19973065.1535744/1‑150 (MQ=60)
                                                                                                    GAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGA                                                >  SRR19973065.1055656/1‑150 (MQ=60)
                                                                                                    GAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGA                                                >  SRR19973065.1056109/1‑150 (MQ=60)
                                                                                                      ATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACG                                              >  SRR19973065.892009/1‑150 (MQ=60)
                                                                                                       TTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGG                                             >  SRR19973065.2467464/1‑150 (MQ=60)
                                                                                                             ATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATA                                       <  SRR19973065.1189458/150‑1 (MQ=60)
                                                                                                                    GTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGC                                >  SRR19973065.1578864/1‑150 (MQ=60)
                                                                                                                       GATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAA                             >  SRR19973065.2618461/1‑150 (MQ=60)
                                                                                                                        ATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAAT                            <  SRR19973065.1588315/150‑1 (MQ=60)
                                                                                                                        ATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAAT                            >  SRR19973065.804483/1‑150 (MQ=60)
                                                                                                                            CTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTC                        >  SRR19973065.2067374/1‑150 (MQ=60)
                                                                                                                              CGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGG                      >  SRR19973065.384649/1‑150 (MQ=60)
                                                                                                                               GATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGT                     >  SRR19973065.387011/1‑150 (MQ=60)
                                                                                                                                 TATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAT                   <  SRR19973065.2843457/150‑1 (MQ=60)
                                                                                                                                 TATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAT                   <  SRR19973065.1591479/150‑1 (MQ=60)
                                                                                                                                    CCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAG                >  SRR19973065.1039373/1‑150 (MQ=60)
                                                                                                                                       TTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTA             <  SRR19973065.285030/150‑1 (MQ=60)
                                                                                                                                       TTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTA             <  SRR19973065.1347528/150‑1 (MQ=60)
                                                                                                                                          CAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCG          >  SRR19973065.3071743/1‑150 (MQ=60)
                                                                                                                                          CAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATAAGGTAGCG          >  SRR19973065.3070133/1‑150 (MQ=60)
                                                                                                                                           AATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGG         >  SRR19973065.358035/1‑150 (MQ=60)
                                                                                                                                           AATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGG         >  SRR19973065.358021/1‑150 (MQ=60)
                                                                                                                                              CAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGG      >  SRR19973065.131414/1‑150 (MQ=60)
                                                                                                                                               AACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT     >  SRR19973065.2991833/1‑150 (MQ=60)
                                                                                                                                                 CAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAA   >  SRR19973065.3083646/1‑150 (MQ=60)
                                                                                                                                                  AATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG  <  SRR19973065.1997949/150‑1 (MQ=60)
                                                                                                                                                  AATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG  <  SRR19973065.1549171/150‑1 (MQ=60)
                                                                                                                                                  AATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG  <  SRR19973065.818789/150‑1 (MQ=60)
                                                                                                                                                     |                                                                                                                                                  
TTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAG  >  CP009273/2399061‑2399356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑