Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F142 I0 R1	859	274.6	8723680	96.4%	8409627	150.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	2,399,210	G→T	90.0%	S304* (TCA→TAA)	lrhA ←	transcriptional repressor of flagellar, motility and chemotaxis genes

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,399,210	0	G	T	90.0%	534.0 / 46.0	192	S304* (TCA→TAA)	lrhA	transcriptional repressor of flagellar, motility and chemotaxis genes
Reads supporting (aligned to +/- strand): ref base G (14/6); new base T (77/95); total (91/101)
Fisher's exact test for biased strand distribution p-value = 3.60e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 194 total aligned reads displayed.

TGTACGTTCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCA  >  CP009273/2399063‑2399359

 gTACTTTCTGAATTATGCGATGAAGGATTTTTCCT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAat                                                                                                                                                    <  2:4046803/150‑1 (MQ=255)

 gTACGTTCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGATATCCCTTTCAATCAACAAGGaaa                                                                                                                                                    >  1:4125177/1‑149 (MQ=255)

 gTACGTTCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTTTCTAAGGAATTATGTATCGTGCGTCGATTAAACGATATACCTTTGCATCAACCATTAat                                                                                                                                                    >  1:97266/1‑150 (MQ=255)

   aCGTTCTGAAATATGGGATTATGTATTTTTAAT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTAAATCAACAATTAatca                                                                                                                                                  <  1:364019/150‑1 (MQ=255)

     gTTCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGATATCCCTTTCAATCAACAATTGatcatc                                                                                                                                                >  2:2780056/1‑150 (MQ=255)

      ttCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACAATTGTCTCAGGAATTATCTAACGTCCGTCGATTACTCGATATCCCATTCAATCAACAATTAataaacc                                                                                                                                               >  1:2704388/1‑145 (MQ=255)

       tCTGCACTTTGCGTTGATGTATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                              <  2:1035310/150‑1 (MQ=255)

       tCTGCACTTTGCGATCAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                              <  1:3512693/150‑1 (MQ=255)

       tCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                              <  1:1736365/150‑1 (MQ=255)

       tCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                              <  2:3228143/150‑1 (MQ=255)

       tCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATccc                                                                                                                                              <  1:2393362/150‑1 (MQ=255)

       tCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATacc                                                                                                                                              >  1:2033628/1‑150 (MQ=255)

        cTGCACTATGGGATGATGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATcccc                                                                                                                                             <  2:4185223/150‑1 (MQ=255)

        cTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATcccc                                                                                                                                             >  1:991618/1‑150 (MQ=255)

         ttcACTTTGCTATGAATGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCt                                                                                                                                            <  1:436566/148‑1 (MQ=255)

         tGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATGGTCTAAGGAATTATCTTTCGTCCGTCGATGTCTCGATATCCCTTTAAATCAACAATTTTTCATccccg                                                                                                                                            >  1:556968/1‑149 (MQ=255)

           cACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTATTTTTTAAGGAATTATAAATCGTACGTAGGGTAATCGATATACAATTAAATCAACAAATAATAATacccaaa                                                                                                                                          >  1:4043233/1‑147 (MQ=255)

                     ttatgcaTTTTTAGA‑AAAAAAACGCCGCTGGGGTTTCAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAc                                                                                                                                <  1:1093075/144‑1 (MQ=255)

                     tcaattaTTTTAACA‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAc                                                                                                                                <  1:1500323/144‑1 (MQ=255)

                      gAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACAATTGTCTCAGGAATTATCTATGGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATAATACCCATACGGAGCCGACa                                                                                                                               >  2:2920391/1‑150 (MQ=255)

                       aaGTATTTTAACT‑AAAAAAACGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAt                                                                                                                              <  1:3777660/150‑1 (MQ=255)

                            tttttACTAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTggg                                                                                                                          <  2:3563585/150‑1 (MQ=255)

                              tttACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTg                                                                                                                       <  2:3634717/150‑1 (MQ=255)

                              tttACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTg                                                                                                                       <  2:3386241/150‑1 (MQ=255)

                                       aaaaaaGCCGCTGGGGTATAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCa                                                                                                               <  2:1570190/150‑1 (MQ=255)

                                        aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCAc                                                                                                              >  2:3996541/1‑150 (MQ=255)

                                        aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAATGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCGTTCAAGCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCAc                                                                                                              >  1:1430267/1‑150 (MQ=255)

                                               cGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAGTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTAt                                                                                                       <  2:2324316/150‑1 (MQ=255)

                                                gCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATg                                                                                                      <  1:4177260/150‑1 (MQ=255)

                                                  tGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTGCGTCGATTACTCGATATACCTTTAAATAAACAATTAATCATCCCCGTACGGAGCAGACATTGGGCTGGATTTCCCCGGCTTATGGt                                                                                                    >  2:1472805/1‑150 (MQ=255)

                                                     ggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAAACATCCCCGTCCGGAGCCGACATTGGGCGGTATTGCCACGGAGTATGGTAGc                                                                                                 >  1:3571939/1‑150 (MQ=255)

                                                      gTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGct                                                                                                <  2:3284348/150‑1 (MQ=255)

                                                        ttAAAACACCCCCAGCGGCTCGTTTTTTACACTATTTTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCGTTAAAACAACAATTAATCATCCCCATCCCGAGCAGACATTGGGCTGTATTTGCACGGATTATTGTAgatgt                                                                                              >  2:2543394/1‑146 (MQ=255)

                                                        ttAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGctct                                                                                              <  2:1653843/150‑1 (MQ=255)

                                                          aaaaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTcc                                                                                            <  1:4242495/150‑1 (MQ=255)

                                                          aaaaCACCCCCAGCGGCTCGTTTTTTACACTAGTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTcc                                                                                            <  1:3053089/150‑1 (MQ=255)

                                                           aaaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCa                                                                                           <  2:1276388/150‑1 (MQ=255)

                                                           aaaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCa                                                                                           <  1:2273379/150‑1 (MQ=255)

                                                            aaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACCTTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCAt                                                                                          >  2:1911676/1‑150 (MQ=255)

                                                            aaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCAt                                                                                          >  2:631280/1‑150 (MQ=255)

                                                            aaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAAAAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTATCCAt                                                                                          >  2:187071/1‑150 (MQ=255)

                                                            aaCACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCATTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAATGGGCTGTATTGCCACGGATTATGGTAGCTATCCAt                                                                                          >  2:1179293/1‑150 (MQ=255)

                                                             acacCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATc                                                                                         >  2:721744/1‑150 (MQ=255)

                                                             acacCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATc                                                                                         <  1:1127571/150‑1 (MQ=255)

                                                                     aGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAAAGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATa                                                                                 >  1:311387/1‑150 (MQ=255)

                                                                     aGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATAGTCCGTCGATTAATCGATATACCTTTAAATCAAAAATGAATAATACCCTTACGGAGCAGACATTTGGCTGTATTTCCACGGATTATGGTAGCTCTACATCGCCTGATa                                                                                 >  1:3378305/1‑150 (MQ=255)

                                                                      gCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAg                                                                                <  2:2214201/150‑1 (MQ=255)

                                                                       cGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCAATAGTCCGTCGATTACTCGATATCCCTTTCAATAAACAATTAATCATACCCATCCGGAGCAGACAATTGGCTGTATTGCCCCGGATTATTGTAGCTATCCATCGCCTGATAGa                                                                               >  1:15250/1‑150 (MQ=255)

                                                                            cGTTTTTTACACTCTTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAcc                                                                          <  1:3259001/150‑1 (MQ=255)

                                                                            cGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAcc                                                                          >  1:60028/1‑150 (MQ=255)

                                                                            cGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCAcc                                                                          >  1:783711/1‑150 (MQ=255)

                                                                             gTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCt                                                                         <  2:297324/150‑1 (MQ=255)

                                                                               tttttACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTgg                                                                       >  2:981199/1‑150 (MQ=255)

                                                                                   tACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCa                                                                   >  1:2443565/1‑150 (MQ=255)

                                                                                   tACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCa                                                                   <  2:2418589/150‑1 (MQ=255)

                                                                                   tACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTACAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCa                                                                   <  1:1568381/150‑1 (MQ=255)

                                                                                    acacTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAg                                                                  <  1:2626145/150‑1 (MQ=255)

                                                                                      acTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCt                                                                >  2:952279/1‑150 (MQ=255)

                                                                                      acTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCt                                                                >  2:2818480/1‑150 (MQ=255)

                                                                                           tGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCatta                                                           <  1:631280/150‑1 (MQ=255)

                                                                                           tGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCatta                                                           >  1:3337718/1‑150 (MQ=255)

                                                                                              ctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCAttatta                                                        >  2:2119552/1‑150 (MQ=255)

                                                                                              ctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCAttatta                                                        <  1:2721990/150‑1 (MQ=255)

                                                                                              ctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCAttatta                                                        <  1:655149/150‑1 (MQ=255)

                                                                                                cAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACt                                                      >  2:1818743/1‑150 (MQ=255)

                                                                                                  ggAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTgg                                                    >  1:2339107/1‑150 (MQ=255)

                                                                                                      ttATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACgg                                                >  1:3778367/1‑150 (MQ=255)

                                                                                                       tatctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGa                                               <  1:3407504/150‑1 (MQ=255)

                                                                                                       tatctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGa                                               <  1:3407512/150‑1 (MQ=255)

                                                                                                       tatctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACCTTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGa                                               >  2:2287553/1‑150 (MQ=255)

                                                                                                         tctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATc                                             <  2:812406/150‑1 (MQ=255)

                                                                                                           tatcGTCCGTCGATTACTCGATATCCCTTTAAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAt                                           >  1:1911129/1‑150 (MQ=255)

                                                                                                            atcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATa                                          <  2:4079552/150‑1 (MQ=255)

                                                                                                            atcGTCCGTCGATTACTCGATATCACTTTCAATCAACAATTAATCATCCCCTTCAGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTTGACGGATCATa                                          <  2:1275091/150‑1 (MQ=255)

                                                                                                             tcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAg                                         >  2:271829/1‑150 (MQ=255)

                                                                                                                   gtcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGc                                   >  1:4014600/1‑150 (MQ=255)

                                                                                                                   gtcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGc                                   <  2:326444/150‑1 (MQ=255)

                                                                                                                   gtcGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGc                                   <  2:3499050/150‑1 (MQ=255)

                                                                                                                      gATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaaa                                >  2:1140645/1‑150 (MQ=255)

                                                                                                                      gATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCaaa                                >  2:1140699/1‑150 (MQ=255)

                                                                                                                        ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAata                              <  2:2113433/150‑1 (MQ=255)

                                                                                                                        ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAata                              <  2:2113421/150‑1 (MQ=255)

                                                                                                                        ttACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAata                              >  1:2060226/1‑150 (MQ=255)

                                                                                                                          aCTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATAtt                            >  2:571311/1‑150 (MQ=255)

                                                                                                                          aCTCGATATCCCTTTAAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATAtt                            <  1:1326096/150‑1 (MQ=255)

                                                                                                                               atatCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTa                       >  1:3587672/1‑150 (MQ=255)

                                                                                                                                tatCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAt                      >  1:1449647/1‑150 (MQ=255)

                                                                                                                                   cccTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAg                   >  2:1240072/1‑150 (MQ=255)

                                                                                                                                    ccTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAgg                  <  1:3914491/150‑1 (MQ=255)

                                                                                                                                       ttCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAg               <  1:2846542/150‑1 (MQ=255)

                                                                                                                                        tcaatcaaCAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAgc              >  1:461579/1‑150 (MQ=255)

                                                                                                                                           atcaaCAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTCgcggc           >  2:500004/1‑150 (MQ=255)

                                                                                                                                             caacaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGcggcgg         <  1:3035582/150‑1 (MQ=255)

                                                                                                                                              aacaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTCGCGGCGGt        >  2:218801/1‑150 (MQ=255)

                                                                                                                                              aacaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGt        >  1:275811/1‑150 (MQ=255)

                                                                                                                                              aacaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGt        >  1:2226635/1‑150 (MQ=255)

                                                                                                                                               acaaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTa       <  1:1660102/150‑1 (MQ=255)

                                                                                                                                                caaTTAATCATCCCCTTCCGTAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTaa      <  2:1663862/150‑1 (MQ=255)

                                                                                                                                                caaTTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTaa      >  2:3795900/1‑150 (MQ=255)

                                                                                                                                                    gAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCa  >  2:2405672/1‑150 (MQ=255)

TGTACGTTCTGCACTATGCGATGAAGGATTTTTACT‑AAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCA  >  CP009273/2399063‑2399359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  >  CP009273/2399063‑2399354

TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAA                                                                                                                                                >  SRR19973079.3598458/1‑150 (MQ=60)

   acgttctgaaatatgggattatgtATTTTTAATAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTAAATCAACAATTAATCA                                                                                                                                             <  SRR19973079.365961/126‑1 (MQ=60)

    ggttgtgcactctgctttgtattattttaaaTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCAT                                                                                                                                            <  SRR19973079.1558410/119‑1 (MQ=60)

       tctgacctctgcgatgatgcatttttcaTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCC                                                                                                                                         <  SRR19973079.1499868/122‑1 (MQ=60)

       TCTGCACTTTGCGATCAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCC                                                                                                                                         <  SRR19973079.3530758/150‑1 (MQ=60)

       TCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCC                                                                                                                                         <  SRR19973079.1745577/150‑1 (MQ=60)

       TCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCC                                                                                                                                         <  SRR19973079.2405734/150‑1 (MQ=60)

       TCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATACC                                                                                                                                         >  SRR19973079.2044324/1‑150 (MQ=60)

        CTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCC                                                                                                                                        >  SRR19973079.997226/1‑150 (MQ=60)

        CGGCACTATGCGATGATGGATTTTACCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCC                                                                                                                                        <  SRR19973079.3833992/150‑1 (MQ=60)

         TTCACTTTGCTATGAATGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCT                                                                                                                                       <  SRR19973079.439177/150‑1 (MQ=60)

         TGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTTTATCAGGAATTATATATCGTCCGTCGATTACTCGATATCCCTTTCAATAAACAATTAATCATCCCCA                                                                                                                                       >  SRR19973079.560293/1‑150 (MQ=60)

           cactttgggttgaagttttttaACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTC                                                                                                                                     <  SRR19973079.4240562/128‑1 (MQ=60)

            actttgctatgatgtATTTTTAATAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCC                                                                                                                                    <  SRR19973079.218476/135‑1 (MQ=60)

              TATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGG                                                                                                                                  >  SRR19973079.340018/1‑150 (MQ=60)

                    tttaattaatttaACTAAAAAAAAGCCGCTGGGTTTTAAAACACCACCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCTACAATTAATCATCCCCTTCCGGAGCAGA                                                                                                                            <  SRR19973079.539874/137‑1 (MQ=60)

                    TTGAAGGTTTTTAACAAAAAAAACGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGA                                                                                                                            <  SRR19973079.539554/150‑1 (MQ=60)

                     tttcgttttttcaaaAAAAAAACGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAC                                                                                                                           <  SRR19973079.1099482/135‑1 (MQ=60)

                     ttatgcatttttagaAAAAAAACGCCGCTGGGGTTTCAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAC                                                                                                                           <  SRR19973079.1099156/135‑1 (MQ=60)

                     ttaagtattttaacaAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAC                                                                                                                           <  SRR19973079.1508591/135‑1 (MQ=60)

                     tcaattattttaacaAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAC                                                                                                                           <  SRR19973079.1508586/135‑1 (MQ=60)

                     TGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGAC                                                                                                                           <  SRR19973079.1441208/150‑1 (MQ=60)

                       AATGATTTTTCCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAT                                                                                                                         <  SRR19973079.2704403/150‑1 (MQ=60)

                       AAGTATTTTAACTAAAAAAACGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAT                                                                                                                         <  SRR19973079.3797013/150‑1 (MQ=60)

                       AAGGATATTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACGAGTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACAT                                                                                                                         <  SRR19973079.3797014/150‑1 (MQ=60)

                                TACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCGCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTTCTCGATATCCCTTTGAAGCAACAAGTAATCATCCCCTTCCTGAGCAGACAGTGGGGTGTA                                                                                                                >  SRR19973079.1647030/1‑150 (MQ=60)

                                  CTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGATATCCCTTTCAATCAACAATTAATAATCCCCTTCCGGAGCCGACATTGGGCGGGATT                                                                                                              >  SRR19973079.2841880/1‑150 (MQ=60)

                                       AAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAATGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCGTTCAAGCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCAC                                                                                                         >  SRR19973079.1438003/1‑150 (MQ=60)

                                           AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGGTTACTCGCTATCCCTTTCAATCAACAATTAATAATACCCTTCCGGAGCCGACATTGGGCTGGATTGCCACGGAT                                                                                                     >  SRR19973079.335315/1‑150 (MQ=60)

                                           AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAT                                                                                                     <  SRR19973079.4350293/150‑1 (MQ=60)

                                              CGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTAT                                                                                                  <  SRR19973079.4185479/150‑1 (MQ=60)

                                               GCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATG                                                                                                 <  SRR19973079.4198438/150‑1 (MQ=60)

                                                  GGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACAATTTTCTCAGGAAATATCTATCGTGCGTCGATTAAGCGATATACCATTAAATAAACAAATAATAATCCCCGACCGGAGCAGACAATGGGCGGTATTTCCACCGCTTATGGTA                                                                                              >  SRR19973079.4062609/1‑150 (MQ=33)

                                                   GGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAG                                                                                             <  SRR19973079.525491/150‑1 (MQ=60)

                                                    GGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGC                                                                                            <  SRR19973079.1705715/150‑1 (MQ=60)

                                                    GGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAAACATCCCCGTCCGGAGCCGACATTGGGCGGTATTGCCACGGAGTATGGTAGC                                                                                            >  SRR19973079.3590156/1‑150 (MQ=60)

                                                    GGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACTAATGTCTAAGGAATTATCTATAGTCCGTCGATTAATAGATATCCCTTTCAAAAAAAAATTAATAAACCCCATCCCGAGCCGACAATTGGCTGTATTTCCACCGATTATGGTAGC                                                                                            >  SRR19973079.3106087/1‑150 (MQ=48)

                                                         AAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCC                                                                                       <  SRR19973079.4263964/150‑1 (MQ=60)

                                                         AAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCC                                                                                       <  SRR19973079.2063715/150‑1 (MQ=60)

                                                         AAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCC                                                                                       <  SRR19973079.3589328/150‑1 (MQ=60)

                                                         AAAACACCCCCAGCGGCTCGTTTTTTACACTAGTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCC                                                                                       <  SRR19973079.3068898/150‑1 (MQ=60)

                                                          AAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCA                                                                                      <  SRR19973079.2285192/150‑1 (MQ=60)

                                                          AAACACCCCCAGCGGCTCGTTTTTTACACACTTGTCTCAGGCAATATCTAACGTCCCTCGATTACACGATATCCCATTCAATCAACCAATAAACAACCCCGTCCCGAGCAGACAATGGGCGGTATTGCCACGGAGTATGGTAGCTCTCCA                                                                                      >  SRR19973079.1943307/1‑150 (MQ=53)

                                                            ACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATC                                                                                    <  SRR19973079.1133991/150‑1 (MQ=60)

                                                                CCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCT                                                                                <  SRR19973079.4048692/150‑1 (MQ=60)

                                                                    AGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATA                                                                            <  SRR19973079.62478/150‑1 (MQ=60)

                                                                    AGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAAAGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATA                                                                            >  SRR19973079.313188/1‑150 (MQ=60)

                                                                    AGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATAGTCCGTCGATTAATCGATATACCTTTAAATCAAAAATGAATAATACCCTTACGGAGCAGACATTTGGCTGTATTTCCACGGATTATGGTAGCTCTACATCGCCTGATA                                                                            >  SRR19973079.3395717/1‑150 (MQ=60)

                                                                      CGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCAATAGTCCGTCGATTACTCGATATCCCTTTCAATAAACAATTAATCATACCCATCCGGAGCAGACAATTGGCTGTATTGCCCCGGATTATTGTAGCTATCCATCGCCTGATAGA                                                                          >  SRR19973079.15442/1‑150 (MQ=60)

                                                                       GGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGAT                                                                         >  SRR19973079.2312609/1‑150 (MQ=60)

                                                                           CGTTTTTTACACTCTTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                     <  SRR19973079.3275459/150‑1 (MQ=60)

                                                                           CGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                     >  SRR19973079.60619/1‑150 (MQ=60)

                                                                           CGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                     <  SRR19973079.180552/150‑1 (MQ=60)

                                                                           CGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                     >  SRR19973079.788485/1‑150 (MQ=60)

                                                                           CGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACC                                                                     >  SRR19973079.788122/1‑150 (MQ=60)

                                                                             TTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTG                                                                   <  SRR19973079.1352949/150‑1 (MQ=60)

                                                                                TTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGC                                                                >  SRR19973079.1931437/1‑150 (MQ=60)

                                                                                 TTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTTATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCC                                                               >  SRR19973079.2734956/1‑150 (MQ=60)

                                                                                 TTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCC                                                               >  SRR19973079.447208/1‑150 (MQ=60)

                                                                                  TACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCA                                                              >  SRR19973079.2456120/1‑150 (MQ=60)

                                                                                  TACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTACAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCA                                                              <  SRR19973079.1577032/150‑1 (MQ=60)

                                                                                   ACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAG                                                             <  SRR19973079.2639712/150‑1 (MQ=60)

                                                                                   ACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAG                                                             <  SRR19973079.2743542/150‑1 (MQ=60)

                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                      <  SRR19973079.634898/150‑1 (MQ=60)

                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                      <  SRR19973079.636031/150‑1 (MQ=60)

                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCAGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                      <  SRR19973079.1862187/150‑1 (MQ=60)

                                                                                          TGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTA                                                      >  SRR19973079.3354831/1‑150 (MQ=60)

                                                                                             CTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTA                                                   <  SRR19973079.658830/150‑1 (MQ=60)

                                                                                             CTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTA                                                   <  SRR19973079.2736066/150‑1 (MQ=60)

                                                                                              TCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTAC                                                  <  SRR19973079.2377163/150‑1 (MQ=60)

                                                                                              TCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTAC                                                  <  SRR19973079.1214338/150‑1 (MQ=60)

                                                                                                 GGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGG                                               >  SRR19973079.2351254/1‑150 (MQ=60)

                                                                                                     TTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGG                                           >  SRR19973079.3797724/1‑150 (MQ=60)

                                                                                                     TTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGG                                           >  SRR19973079.2488226/1‑150 (MQ=60)

                                                                                                      TATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGA                                          <  SRR19973079.3425090/150‑1 (MQ=60)

                                                                                                      TATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGA                                          <  SRR19973079.3425102/150‑1 (MQ=60)

                                                                                                      TATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGA                                          <  SRR19973079.3425098/150‑1 (MQ=60)

                                                                                                      TATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCAGCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGA                                          <  SRR19973079.3425096/150‑1 (MQ=60)

                                                                                                          TATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAT                                      <  SRR19973079.2259997/150‑1 (MQ=60)

                                                                                                          TATCGTCCGTCGATTACTCGATATCCCTTTAAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCAT                                      >  SRR19973079.1921322/1‑150 (MQ=60)

                                                                                                                CCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACA                                >  SRR19973079.3965430/1‑150 (MQ=60)

                                                                                                                  GTCGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGC                              >  SRR19973079.4034826/1‑150 (MQ=60)

                                                                                                                    CGATTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAA                            >  SRR19973079.4116704/1‑150 (MQ=60)

                                                                                                                       TTACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATA                         >  SRR19973079.2071024/1‑150 (MQ=60)

                                                                                                                         ACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATT                       <  SRR19973079.745381/150‑1 (MQ=60)

                                                                                                                         ACTCGATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATT                       <  SRR19973079.2927727/150‑1 (MQ=60)

                                                                                                                         ACTCGATATCCCTTTAAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATT                       <  SRR19973079.1333564/150‑1 (MQ=60)

                                                                                                                              ATATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTA                  >  SRR19973079.3605925/1‑150 (MQ=60)

                                                                                                                               TATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAT                 <  SRR19973079.3220503/150‑1 (MQ=60)

                                                                                                                               TATCCCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTAT                 >  SRR19973079.1457495/1‑150 (MQ=60)

                                                                                                                                   CCTTTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGG             <  SRR19973079.3934317/150‑1 (MQ=60)

                                                                                                                                      TTCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAG          <  SRR19973079.2861035/150‑1 (MQ=60)

                                                                                                                                       TCAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGC         >  SRR19973079.464365/1‑150 (MQ=60)

                                                                                                                                        CAATCAACAATTAATCCTCCCCTTCCGGAGCAGACATTGGGCTGTATAGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCG        <  SRR19973079.1490475/150‑1 (MQ=60)

                                                                                                                                        CAATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCG        <  SRR19973079.3691274/150‑1 (MQ=60)

                                                                                                                                          ATCAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGC      >  SRR19973079.3359077/1‑150 (MQ=60)

                                                                                                                                            CAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGG    <  SRR19973079.3051322/150‑1 (MQ=60)

                                                                                                                                            CAACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGG    <  SRR19973079.3051296/150‑1 (MQ=60)

                                                                                                                                             AACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT   >  SRR19973079.277531/1‑150 (MQ=60)

                                                                                                                                             AACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGT   >  SRR19973079.2238146/1‑150 (MQ=60)

                                                                                                                                              ACAATTAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  <  SRR19973079.1669107/150‑1 (MQ=60)

TGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTA  >  CP009273/2399063‑2399354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`