Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F9 I0 R1
|
131 |
136.1 |
2723430 |
98.1% |
2671684 |
229.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,151,328 |
T→G |
22.7% |
A590A (GCA→GCC) |
ppc ← |
phosphoenolpyruvate carboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,151,328 | 0 | T | G | 22.7%
| 132.3
/ 4.2
| 91 | A590A (GCA→GCC) | ppc | phosphoenolpyruvate carboxylase |
| Reads supporting (aligned to +/- strand): ref base T (46/17); new base G (10/15); total (57/34) |
| Fisher's exact test for biased strand distribution p-value = 6.29e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTC > NC_000913/4151091‑4151565
|
gctggaGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAACAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAT‑CAGCGCCGCATGA‑GC‑AGGTg < 1:427222/234‑1 (MQ=255)
gcgGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTg < 2:416556/239‑1 (MQ=255)
gTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCCCATGA‑GC‑AGGTg‑cg > 1:1244980/1‑238 (MQ=255)
tCGCAGGAGGTGACTGACAGTTCATCCATAATGCTCCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCcgcg < 2:1250838/239‑1 (MQ=255)
tCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCcgcg < 2:502615/239‑1 (MQ=255)
aGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCCTGA‑GC‑AGGGG‑GCGCGCCGCGACCa > 1:281225/1‑239 (MQ=255)
aGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGAccc > 1:1071122/1‑238 (MQ=255)
aTGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑CGGTG‑CGCCGCCGCGGCCAATggg > 1:2955/1‑238 (MQ=255)
gactgacAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATTGCCCCGGCATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGTGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCCTGA‑GC‑AGGTG‑CGCCGCCGCGGCCTATGG‑aa > 1:594836/1‑238 (MQ=255)
acAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATTA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AAccgcc > 1:487070/1‑238 (MQ=255)
aGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGCCGGTTGTGACCA‑CCACGCCCGACGACGC‑A‑GTG‑CGCCGCCGCGCCCACTGG‑AAAcgccgc > 2:764245/1‑238 (MQ=255)
tCATCCAAAAGGCGCCGCCAGCTTTTTGCCGGCGCGGGGGGTGGCAGCAGGTTGGTTT‑CCAGAACCGCCCCGGTAAAAAGCG‑ACGGGCGGCTGACGGTGATTTCGGGCAGACCATATTAAAAGCGG‑ATCTC‑CCCCCCTTGTGCGGTTACGCGCGGGCCGCC‑TTTCGGG‑CTTCGGGGCGGTTGTGCCAG‑CGGCGCCGCAGGA‑GC‑GGGTG‑CCCCGCCGCGACCAATGG‑AACCGCCGCGAcc < 2:1108863/239‑1 (MQ=255)
tAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGGG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGaac > 2:1122938/1‑239 (MQ=255)
aTGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGTCGGCCCCC‑TTTCCGG‑CTTCCTTGCGGCTTGGCCAG‑CAGCGCCGCACTT‑CC‑CGGGG‑CGCCGCCTGGGCCCAAGG‑GACCGCCGCGCCCGCgggccaa > 2:727116/1‑234 (MQ=255)
aTGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGAGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGGCCCATGG‑AACCGCCGCGACCGGGGcacaa > 1:145426/1‑239 (MQ=255)
gACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCCCCCCGACCGTGGAACAACGTc > 1:786985/1‑239 (MQ=255)
aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGGATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGGTGTGACAA‑GAGCGCCGCATGA‑GC‑AGGTG‑CGCCCCCGCGCACAAAGG‑GACCCCCGCGACCCGGGAAAAACGACa > 2:610449/1‑239 (MQ=255)
cGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGGG‑CGCCGCCGCGACCAATGG‑AACCGCCCCGCCCGTGGAACAACGTCa > 1:1108543/1‑238 (MQ=255)
cGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGGTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGGTGTGGCAG‑CAGCGCCCCCTGA‑GC‑AGGTG‑CGCCGCCCGGACCAATGG‑CACCGCCGCGACCGTGGTACAACggcc > 2:96814/1‑235 (MQ=255)
ccAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGGG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAAAAAACTCAGc > 1:1216143/1‑238 (MQ=255)
tctTGCGGCGCGGGCGGGGGCGGCAGGTTGGCTT‑CCAGAACCCCCCGGGTATAAAGCG‑CGAGGCTGCTGCGGGTTTTTCGTGGCAGACTATTTTAAAATCGG‑TCCAT‑CTCCCCCTTTTCGGTCCCGGGCGGGCCGCC‑TTTCCGG‑CTTCCTGGGGGTTGTGACAG‑CAGCCCCGCATGA‑GC‑AGGGG‑CGCCGCCGCGACAAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATAcc < 2:832295/239‑1 (MQ=255)
tttCGGCTCCGGCGGTGGCAGCAGGTTTGCTT‑CCAGAATCTCCCCGGTATAAAGCG‑GCAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑CTCAT‑CTCGCCCTGCTCGGGTACGCCCAGGCCGCC‑TTTCAGG‑CTTACTGGCGGCTTTGACAG‑GCTAGCCGCACGA‑GG‑CGGGG‑CCCCGCCCCCAACAAACG‑AACCGCCGCGGACGAGGaacaactggccgccaaaacac > 2:67077/1‑223 (MQ=255)
gCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCCTGA‑GC‑AGGGG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGGGGCACAACGGTCGCTCAATACCCGCtttt > 1:159460/1‑239 (MQ=255)
gCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGG‑GC‑AGGGG‑CGCCGCCGCGACCCATGG‑AACCGCCGCGACCGTGGGACAACGTCAGGTCAATACCCGCtttt > 1:724406/1‑239 (MQ=255)
gCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCCCGCCCGCGGAACAACGTCAGCTCAATACCCGCtttt > 1:992046/1‑239 (MQ=255)
gggggggggcggcGGGTGGGCTC‑CCAAAATCGCCCCGGAAAAAAGCG‑ACGGGGTGCTGACGGTGTTTTCGGGCAGACCATTTTAAAAGCGG‑TTCAT‑CTCCCCCTGTTCGGTTACGCGCGGGCCGCC‑TTTCAGG‑CTTCCGGGCGGTTGTGCCAG‑CGGCGCCGCGGGA‑GC‑GGGTG‑CGCCGCCGCGACCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCg < 2:272977/231‑1 (MQ=255)
gggggggggcggcAGGTGGGCTT‑CCAAAATCGCCCCGGTATAACGCG‑ACGGGCTGTGGCGGGTGTTTTCTGGCAGCCCATATTAAAAGCGG‑ATCTC‑CCCGCCCTTTGCGGTTACGCGGAGCCCGCT‑TTCCAGG‑TTTCCGGGGGGTTGTGAAAG‑CAGCCCCGCATGG‑GC‑AGGGG‑CGCCGCCGCGACAAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGc < 2:1165494/232‑1 (MQ=255)
gggggggggaggagGTTGGCTTCCCAGACCCCCCCCGG‑ATAAAGGGCCCGGGCTGCTGCGGGTGATTTGGGGCAGCACTTATTT‑AAGCGG‑ATCCTCCCCGCCTGGTTCGTTTCCGCGCGGGCCGCC‑TTCCGGG‑CTTCCTGGGGGTTGGGCAGG‑CAGCCCCGCATGG‑GC‑AGGGG‑CGCCGCCGCGACCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGc < 2:774967/227‑1 (MQ=255)
ggcggTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGGTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGCCCAAGGG‑AACCGCCCCGACCGGGGGACAACGCCCGCTCAATACCCCCCTTTTCGCa > 2:939735/1‑239 (MQ=255)
ggcggTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGGGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCCTGG‑GC‑AGGGG‑CGCCGCCGCGACCAACGG‑AACCGCCGCCGCCGGGGGAACACGTCAGCTCAATACCCGCTTTTTccgc > 2:944214/1‑236 (MQ=255)
cttgcagaggcgccgggttataGAGCG‑GCGGGCTGGGGGCGGTGTTTTGGGGCAGACAATTTTTAAGGCGG‑ATCCT‑CTCGCCTTGTTCGTTTCCGCGCGGGCCGCT‑TTGCAGG‑CTCCCGGGGGTTTGGGACAG‑CAGCGCCGCAGGA‑GG‑GGGGG‑CGCCGCCGCGCCCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATc < 2:1244980/220‑1 (MQ=255)
ctcccaaaaccccccgGGTATAAAGCA‑ACGGGCTGTGGGGGTTGTTTTCTGGAAGACCTTTTTAAAAGCGG‑ACCTT‑CTCCCCCTTTGGGGTTAGGCGCGGGCCGTC‑TTCCGGG‑CTTCCGGGGGTTTGTGAAAG‑CGGCCCCGAATGG‑GC‑AGGTG‑CGCCGCCGCGCCAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATc < 2:1216143/226‑1 (MQ=255)
tgccagacgccccccGGTATAAAGCG‑ACGGGTGTGTGACGGTGGTTTTGGGCAGACCATTTTAAAAGCGG‑TTCAT‑CTCGCCCGGTTCGGTTCCGCGCGGGCCGCC‑TTTCAGG‑CTTCTTGGCGGTTGTGACGG‑CAGCCCCGCAGGA‑GC‑GGGTG‑CCCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCt < 2:992046/228‑1 (MQ=255)
tgccaacacctcccgtgTAAAAAGGG‑ACGGGCTGCGGACGGGTGTTTCGGACAGACCTTTTTTAAAGCGA‑ATCCC‑CCCGCCTTTTTGGGTTCCCGCCCGCCCGCT‑TTGCAGG‑CTTCGGGGCGTTTTGGCCAC‑CGGCGCCGCATGA‑GC‑GGGGG‑CCCCGCCGC‑ACCAAAGGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCt < 2:739785/223‑1 (MQ=255)
ccAGACCCGCCCCGTAAAAAAGGG‑ACAGGCTGCTGGCGGTTATTTCGGGCAGACCATTTTTAAGGCGG‑ATCAC‑CCCCCCTTGTTGGGTTCCGCGCGGGCCGCT‑TTTCAGG‑CTTCCGGGGGGTTGGGAAAG‑CAGCCCCGCAGGG‑GG‑GGGGG‑CGCCCCCGCGACCAAGGA‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCtgt < 2:159460/239‑1 (MQ=255)
ccGGAATAAAGCG‑ACAGGCTGCTGGGGGTGTTTGCTGGCAGACAATTTTTAAAGCGT‑ATCAC‑CGCGCCTGGTTCGGTTACGCGCAGGCCCCT‑TTTCAGG‑CTCCCTGGGGGTTGTGAAAG‑CAGCGCCGCATGA‑GC‑GGGCG‑CGCCCCCGCCCCCAATGA‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTg < 2:487070/239‑1 (MQ=255)
aGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAAAGCATCCTGTGCCTGATATTGCGCCCCggc > 2:953639/1‑238 (MQ=255)
aCAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAT‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGaa > 1:291453/1‑236 (MQ=255)
aCAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGGCCGTGGAACAACGGCACCTCAATACCCGCTTTTTCGCAGGTTTTTATTAATGCATCCTTTGCCTGCTATTGCGCCCAGGCAGCt > 1:1272396/1‑239 (MQ=255)
aCAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGaa > 1:975448/1‑236 (MQ=255)
aCAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGaa > 1:1217406/1‑236 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGTCAA‑CAGCCCCGCATGA‑GC‑AGGTG‑CGACGCCGCGACCAATGG‑AACCGCCGCCACCGTGGAACAACGTACGCACAAAACCCGCTTTTTCCCGGGGTTTGATTAACGCTACCTCTGCCTGTAAGTTCGACCAAGAAGcc > 2:716331/1‑237 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑GAACGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AAACGCCGCGGCCGCGGGACAAAGTCCCCTCCATACCCGCTTTTTACCCGGATTTGATTAAAGGAATCTTTGCCTGATATTTCGCCCACGacggt > 2:974599/1‑234 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGCCCAATGG‑AACCGCCGCGCCCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTTATGCATCCTGTGCCTGCTATTTCGCCCAGGAAGCt > 2:890566/1‑238 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑GACCGCCGCGACCGTGGAACAACGCCAGCTCCATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGACCAGGAAGCt > 2:555176/1‑238 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTTCGCCCCGGAAGCt > 1:742229/1‑238 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCCATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt > 1:384538/1‑238 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTTCGCCCAGGAAGCt > 1:1255006/1‑238 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt > 1:236754/1‑238 (MQ=255)
cAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGCG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGCTTTGCTTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt > 2:113935/1‑238 (MQ=255)
ggctgcggttgttctctcgcgaaCCTTATTTAATGCGA‑TCCAT‑CCCCCCCGTTTCGTTACCGCGCGGCCCGCC‑TTGCAGG‑CTTCCGGGTGGTTTGCACGG‑GATC‑CCGGAAGG‑GCTGGGCG‑CGCCGCCGCGACAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCAt < 2:67985/216‑1 (MQ=255)
ctgACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCa > 1:242862/1‑238 (MQ=255)
ctgACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGGG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGGCCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCCCCCAGGAAGCTGCCCTCa > 1:1313431/1‑238 (MQ=255)
gtttaTTTCTGG‑AGACCCTTGTTAAAGCGGTCTCAC‑CCCGCCGTTTGGGGTTCGCCGCAGGCCGCT‑TTTCAGC‑CTTCTGGGGTGTGGTACCAG‑CAGGCCCGAATGA‑GA‑GGGTG‑CCCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCg < 2:678647/235‑1 (MQ=255)
ttatttcggcaaGACCATATTAAAGGGGG‑ACCAC‑CTCGCCTTGTTCGGTTCCGCGCGGGCCGCC‑TTCGGGG‑CTTCCGGGCGGTGGGACCAG‑CAGCGCCGCAGGA‑GC‑GGGGG‑CCCCGCCGCGACCAATGA‑ACCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGc < 2:236754/227‑1 (MQ=255)
ggCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCtttt > 2:1352940/1‑237 (MQ=255)
aCCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTTATTAATGCCTCCTGTGCCTGATATTTCGCCCAGGAAGCTGCCATCCCCCCCCCCTCTTTTGCTTAg > 2:602462/1‑238 (MQ=255)
ccATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCCCGACCGGGGAACAACGTCAGCCCAAAACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTTCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGGGTc > 2:686464/1‑239 (MQ=255)
tgttaaaggcggttcccccgccccTGTTGGGTCCCGCGGAGGCCCCC‑TTCCGGG‑CTCCCGGGGGGTTGGGACAG‑CCGCGCCGCAGGA‑GC‑GGGTG‑CCCCCCCGCGACCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGa < 2:975448/218‑1 (MQ=255)
tAAAGGGG‑ATCGT‑CTCGCCCTGTGCGATTGCGCGGCGGCCCCC‑TTCGGGG‑CTGCGGGGCGGTGGAGAACG‑GAGCCCCGCGTGG‑GA‑GGGGG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAg < 2:1108543/239‑1 (MQ=255)
aaaGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGGGCCTGATATTGCGCCCCGGAAGCTGCCCTCACTCCCGCCTCTTTTGCTGAGTCGGAATAg > 2:952911/1‑238 (MQ=255)
gCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCTAGGAAGCTGCCCTCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCaa > 1:877379/1‑239 (MQ=255)
gg‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATc > 1:198526/1‑169 (MQ=255)
g‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca > 2:869555/1‑239 (MQ=255)
g‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCCCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCCCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATTTTTTGCTGAGTCGGAATAGCCAatca > 1:665034/1‑239 (MQ=255)
atcat‑cTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCCGGAAGCTGCCATCAATCCCCCCTCTTTTGCTGAGTCGGAATAGCCAatca > 2:934803/1‑238 (MQ=255)
atcat‑cTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca > 1:1071024/1‑238 (MQ=255)
atcat‑cTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTCGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGGGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAGTAGCCAatca > 1:1308944/1‑238 (MQ=255)
ccat‑cCCGCCTTGTGCGGTGACGCGCAGCCCTCC‑TTGAGGG‑CTCCCGGGCGGTTGTAACGG‑CGGCGCCGAAAGA‑GA‑GGGTG‑CCCCGCCGCGACAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatcat < 2:613109/237‑1 (MQ=255)
tccccccGCCCTGTCGGGTTGCGAG‑AGGCCCCCTTTTCAGC‑GTTCCGGGGGGTGGTG‑CAGCCACCGCCACAGGG‑GC‑GGGGG‑CGCCGCGGCGACCAATGA‑ACCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatcat < 2:1217406/232‑1 (MQ=255)
tcGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCa > 1:749878/1‑238 (MQ=255)
ccTGTGCGTTTGCGCCCGGGCCGCT‑TTTCAGG‑CTGCCGGGGGGTTGGCACAG‑CAGCGCCGCATGA‑GC‑GGGTG‑CGCCGCCGCGACCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGt < 1:151351/239‑1 (MQ=255)
cgggtCGGTACCGCGCGGCCCCCC‑TTTCGGC‑CTCCCGGGCGTTTGGGCCGC‑CAGCCCCGCA‑GG‑GC‑GGGGGCCGCCGCCGCGCCAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGtt < 2:786985/235‑1 (MQ=255)
ttCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTg > 1:495444/1‑238 (MQ=255)
cgggTTCCGGGCAGGCCCCT‑TTCCGGG‑CTCCCGGGGGGTTGGGACAG‑CAGGGCCGCAGGG‑GC‑GGGGG‑CGCCGCCGCGACAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGcc < 1:639649/237‑1 (MQ=255)
tcggttcgcccccggcccc‑TTTCCGGCCTTCCTGGCGGTGGGGACAG‑CGGCCCCGCTGGG‑GC‑GGGGG‑GCCCGCCGCGCCCATTGT‑ACCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGcc < 2:724406/222‑1 (MQ=255)
gccgcc‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCa > 2:1098238/1‑238 (MQ=255)
gccgcc‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAACGCCGCCTGA‑GC‑AGGTG‑GGCCCCCGCGACCAATGG‑AACCGCCCCCCCCGTGGCACAACGTCAGCCCAATACCCGCCTTTTCGCCGGTTTTGATTAATGCATCCAGTGCCTGTTATTGCGCCCCGGAAGCTGCCTTCACACCCGCATCTTTTTCTGAGTCCGACTAGCCAAACATACCCCTCTTTTTGCCCTCAAACAGGccc > 2:72452/1‑237 (MQ=255)
gctgctgtccggccTTCCGGGCGGGTGGGACAG‑CGCCGCAGAAGGA‑GC‑TGGTG‑CGCCGCGCCAAACAATGA‑ACCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCa < 2:742229/225‑1 (MQ=255)
tc‑TTACAGG‑CTCCCGGAGGGTTGAGACGG‑TCGCGCCGCAGGG‑GC‑AGGGG‑CGCCGCCGCGCCCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATa < 2:35549/238‑1 (MQ=255)
cc‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCCTCTGTTTGCCCTGAATCAGGCCACGAt > 1:1348369/1‑238 (MQ=255)
cc‑TTGCAGC‑CTCCCTGGGGTTTGGGACGG‑CGGCGCCGAAGGA‑GC‑AGGGG‑CGCCGCCCCCACAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATa < 1:1132866/239‑1 (MQ=255)
aGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGTTTAATGCATCCTGTGCCTGATATTGCGCCCCGGAAGCTGCCATCACTCCCGCATCTTTTGCTGGGTCGGAATAGCCAATCATCACACTCTGTTTGCCCTTAATCAGGCCACGCTAcacgc > 2:1256747/1‑234 (MQ=255)
tCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGGAGCTGCCATCACTCCCGCCTCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCCCGCTACCCGTCAatat > 2:989505/1‑239 (MQ=255)
ctgtgACAG‑CAGCGCCGCATGA‑GG‑AGGTG‑CGCCGCCGCGACCAAAGG‑GACCGCCGCGACCGTGGAACAACGGCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGAGCCCAGGAAGCTGCCATCACTCCCGCCTCTTTTGCTGAGTCGGAATAGCAAATCATCCCCATCTGTTTTTCCACAATAAGTCCACGAAACACGTCAAAAtttacagccg > 2:765060/2‑231 (MQ=255)
tgggACAG‑CGGCGCCGCATGA‑GC‑GGGTG‑CGCCGCCGCGACAAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCt < 1:952911/235‑1 (MQ=255)
gACGG‑CCGCGCCGCTGGG‑GG‑AGGTC‑CGCCCCCGCGACCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTggg < 2:384538/238‑1 (MQ=255)
gctgga‑gg‑agGGG‑GGCCGGCGCGTCCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGt < 1:764245/234‑1 (MQ=255)
a‑GC‑AGGTG‑CGCCGCCGCGACCAAGGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCg < 1:1122938/238‑1 (MQ=255)
ggcggttG‑CGCCGCCGCGACAAATGT‑ATCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCATGCCCCGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCg < 1:72452/232‑1 (MQ=255)
gC‑AGGTG‑CGCAGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACACCGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCATGTGCCTGATATTGCGCCCCGGAAGCTGCGATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACAATCTGTTTGCCCTGAATCAGGCCACGCAACCGGTCAAAATTGATCTGCAGGGTCAGGGCATCGTTGGCgtg > 2:1138593/1‑238 (MQ=255)
gtgagTG‑CGCCGCCGCTACCAAGAA‑ATCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCg < 2:39013/233‑1 (MQ=255)
tG‑CGCCGCCGCGCCAAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTc < 1:602462/238‑1 (MQ=255)
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GCGGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTT‑CCAGAATCGCCCCGGTATAAAGCG‑ACAGGCTGCTGACGGTGATTTCTGGCAGACCATATTTAAAGCGG‑ATCAT‑CTCGCCCTGTTCGGTTACGCGCAGGCCGCC‑TTTCAGG‑CTTCCTGGCGGTTGTGACAG‑CAGCGCCGCATGA‑GC‑AGGTG‑CGCCGCCGCGACCAATGG‑AACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTC > NC_000913/4151091‑4151565
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
