Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F27 I0 R1 120 139.6 2835800 98.5% 2793263 226.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,151,328 T→G 23.0% A590A (GCA→GCC)  ppc ← phosphoenolpyruvate carboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,151,3280TG23.0% 110.9 / 2.8 75A590A (GCA→GCC) ppcphosphoenolpyruvate carboxylase
Reads supporting (aligned to +/- strand):  ref base T (38/14);  new base G (12/8);  total (51/24)
Fisher's exact test for biased strand distribution p-value = 3.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTT  >  NC_000913/4151093‑4151564
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
ggTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCACTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑CTGAGGAGGtct                                                                                                                                                                                                                                            >  1:126694/1‑236 (MQ=255)
    gACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTG‑GACCACAGCGCCCC‑CTGCGCAGGGGggccg                                                                                                                                                                                                                                        >  2:1303247/1‑238 (MQ=255)
     aCATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGCGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCTCCTTTCAGGCTTCCTGGCGGTTTT‑GAAAGGACCGCCGC‑ATGAGCAGGGGggccgc                                                                                                                                                                                                                                       >  1:1340019/1‑238 (MQ=255)
      cATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGcgccgccg                                                                                                                                                                                                                                     <  1:946423/239‑1 (MQ=255)
      cATCGCAGGAGATGACTGACAGTTCATCAATAATGCGAGGCCAGCTCTCTGTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTGAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCGTTCAGGCTGCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGcgccgcc                                                                                                                                                                                                                                      <  2:58767/238‑1 (MQ=255)
        tCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATCTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCcgcg                                                                                                                                                                                                                                   <  1:371563/239‑1 (MQ=255)
         cGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGGGCGCCGCcgcg                                                                                                                                                                                                                                   >  1:101826/1‑238 (MQ=255)
         cGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAG‑‑CTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ACGAGCCGGGGCGCCGCcgcgga                                                                                                                                                                                                                                 >  1:1054388/1‑236 (MQ=255)
              gagaTGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATAATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCACCCCCGC‑CTGAGCCGTGGCGCCGCCGGGACCAAt                                                                                                                                                                                                                             >  1:202000/1‑239 (MQ=255)
                        acAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTG‑TACAGCAACGCCGC‑CTGAGCAGGTGCGCCGCAGCCGACAAAGGAAccgcc                                                                                                                                                                                                                    >  2:1228706/1‑238 (MQ=255)
                          aGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGGTTT‑TGCAGCAGCGCCGC‑CTGGGCAGGTGcgccgccccttccctttacacatctga                                                                                                                                                                                                                  >  2:134157/1‑218 (MQ=255)
                            ttCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAAGCCGCCTTTCAGGCTTCCTGGCGGCTGC‑TACAACACCGCCGC‑ACGAGAAGATGCGTCCCCCCCACCACTAGAACcgccgccg                                                                                                                                                                                                                >  2:786143/1‑236 (MQ=255)
                              cATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTT‑GACAGCAGCGCCGC‑ATGAGCCAGGGCGCCGCCGCGACCAATGGAACCGCCGCGcccc                                                                                                                                                                                                             >  1:1237757/1‑238 (MQ=255)
                                    tAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGACTTTCAGGCTTCCTGGCGGGTGT‑GACAGCCGGGGCGG‑ATGAGCCGGTGGGCCGCCGCCGACAAAGGAACCGCCGCGAGCGGGGaaa                                                                                                                                                                                                       >  2:113904/1‑238 (MQ=255)
                                       tGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGGGGaacaac                                                                                                                                                                                                    >  1:1171719/1‑239 (MQ=255)
                                           aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCACCGCCGC‑ATGCGCAGGTGCGCCGCCGCGACCACTGGACACGCCGCGGCCGCGGCAACACGTCa                                                                                                                                                                                                >  2:29693/1‑239 (MQ=255)
                                           aCGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGCTGT‑GACAGCACCGCCCC‑CAGAGCAGGTTGCCCGCCCCGACCAAAGGAAacgcccggcccctgggcaaacacc                                                                                                                                                                                                 >  2:624391/1‑219 (MQ=255)
                                            cGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GGCAGCAACGCCGG‑CTGAGCAGGGGCGCCGCCCCGACCAAAGGGACcgccgccgcccgggcaccacggca                                                                                                                                                                                                >  2:66793/1‑220 (MQ=255)
                                                       tttCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGG‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAAACGCCCCCACCCGGGAACAACGTCCGCCCAAAAccc                                                                                                                                                                                     >  2:1378109/1‑238 (MQ=255)
                                                                      gggcggtgggTTGGCGTCCAGAGTCCCCCCGTTATAAAGGGGCGGTCTGCGGACGTGTTTTTCTG‑GCAGACCATTTTTAATGGGGATCACCTCGCCCTGGTCGGTTACGCGCGGGCCGCCTTTCAGGTTTCCTGGGGGTTGT‑GACAGCGGCGCCGC‑ATGAGCAGGTGCCCCGCCGCGCCCATTGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGtt                                                                                                                                                                      <  2:596800/230‑1 (MQ=255)
                                                                              tgTTGGCTCCCAGAGCCGCCCGGCTAAAAAGCGACGGGGTGGGGTGGGTGTTTTCTG‑GCAGCCCCTATTAAAAGCTGATCATCTCGCCCTGTGCGGTTGCGCGCAGCCCCCCTTCCAGGCTTCCTGGCGGTGGC‑GACCGCAGCGCCGC‑AGGAGCGGGGGCGCCGCCGCGACCAAGGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAAt                                                                                                                                                             <  2:889630/238‑1 (MQ=255)
                                                                                    ctccgaaaccccccccGGTATAAAGCAACAGGCTGCTGGCGGTGATTTCGG‑GAAGCCAATTTTAAAAGGGGATCTTCTCCCCTTGTTGGTTTACGCGGGGCCCGCTTTTCGGTCTTCCGGGGGTTTGT‑GACAGCGGCGCCGC‑ATGGGCGGGTGCCCCCCCGCGCCAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGa                                                                                                                                                                  <  2:1411381/216‑1 (MQ=255)
                                                                                       ccAGAAGCCCCCCGTTATAAAGCGATAGGCGGGTGAGGGTGTTTTCGG‑GCGGCCCTTATTTAAAGCGCTTCATCCCGCCTTGTTCGGTTCCGCGCAGGCCGCCTTTCAGGCTTCGGGGGGGTTGT‑GACAGCAGCGCCCC‑ATGGGCAGGGGCGCCGCCGCCACCAATGAAGCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCtgt                                                                                                                                                    <  2:1051564/239‑1 (MQ=255)
                                                                                        cAGAATCGCCCCGGTATAAACCGACAGGCTGCTGACGGTGATTTCGG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTAACACGCAGGCCTCCTTTCAGGCTTCCTGGCGGTTGG‑GGCCGCAAACCCGC‑GTGCGCAGGTCCGACGCCGCCGACACTGGGAACGCCGCGAACGGGGCAAACCGGCAGCGCCAGACACGCTTTTTCTCAggggtcggttcgtggcctctgag                                                                                                                                                   >  2:973538/1‑218 (MQ=255)
                                                                                         aGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCCGCGCCGC‑CTGGGCAGGGGCGCCGCCCCGACCAAAGGAACCGCCGCGGCCCTGGGACAACGCCAGCTCACTACCCCCCTTTTCCCAGGGTTTGTTTAATTCCTCCtgtg                                                                                                                                                   >  2:72028/1‑238 (MQ=255)
                                                                                              cGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGGGCCGC‑CTGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGGCCGGGGAACAACGGCCGCCCAAAACCCACTTTTTCGCCGGTTTTGATTAATGCaatccttgccctta                                                                                                                                             >  1:1411381/1‑226 (MQ=255)
                                                                                                          aaggcacgggcggcTGA‑GGTTATTTCGGTGCAGAACTTATTCAAAGCGCCCCATCCCGCCTTTGCCGATTCCGCGCGCGCCGCCTTTCGGGTTGCCGGGCGGTAGT‑GCGAGCAGCCCCGT‑ATGGGCGGGTGCCCGCCCGCACCCAATGAACCCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAgg                                                                                                                                 <  2:938457/231‑1 (MQ=255)
                                                                                                               aCAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTCATATTGCGCCCCggca                                                                                                                               >  1:1394129/1‑234 (MQ=255)
                                                                                                                cgggCTGCGGGCGTTGTTTTCGG‑GCAGCCTTTTTTTAAGGGGTACCCTCGCCCCCTTTTGGTTTCCGCCCAGCCCGCCTTCCGGGCTTCCTGGGGTTTGT‑GACAGCGGCGCCGC‑ATGAGCGGGTCCGCCCCCGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt                                                                                                                            <  2:1126347/236‑1 (MQ=255)
                                                                                                                cAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTTT‑GACAGCAGCGCCGC‑ATGAGCAGGGGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt                                                                                                                            >  1:1334210/1‑238 (MQ=255)
                                                                                                                cAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCt                                                                                                                            >  1:194610/1‑238 (MQ=255)
                                                                                                                cAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAAACGCCGCGCACGTGGAACAACGGCAGCTCAATACCCGCTTTTTCCCAAGTTTTGATTAATACATCCTGTGCCCTGTATTTCGCCCAGGAAGCt                                                                                                                            >  2:1207071/1‑238 (MQ=255)
                                                                                                                     tgctgACGGTGGTTTCTG‑GCAGACCATATTTAAAGCGTATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCCACCAATGGAACCGCCGCGCCCCTGGAACAACGTCAGCCCCATACCCCCCTTTTCGCAGGTTTTCATTAATGCATCCTGGGCCTGGTATTTCTGCCAGGAAGCGTCCAt                                                                                                                       >  2:1160170/1‑238 (MQ=255)
                                                                                                                       ctgACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATc                                                                                                                      >  1:1199554/1‑237 (MQ=255)
                                                                                                                              ttttttCTG‑GCCGACAATTTTCAAAGCGGCTCCCCCCGCCCTGTTGGTTTGCGCGCGCGCCCCTTTTCGGTCTTCGTGGGGGTTGT‑GCCACCGCCCCCAC‑TGGAGGAGGGCCCCCCCCCCGACAAAGGTAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGc                                                                                                              <  2:1334210/235‑1 (MQ=255)
                                                                                                                              tgttttCTG‑GCATACCATATTAAAAGCGTCCCCCCCCGCCCTGTTCGTTTCCGCGCGGGCCCCCTTTCAGCCTGCCTGGCGGTTGT‑GACAGCAGCGCCGC‑AGGAGCGGGGGCGCCGCCGCGACCAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGc                                                                                                              <  2:194610/235‑1 (MQ=255)
                                                                                                                                 tttCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCCCCGCGACCGTGGGACAACGTCACCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCACGAAGCTGCCATCACTCCCGCATCt                                                                                                          >  2:1287046/1‑239 (MQ=255)
                                                                                                                                      g‑gCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCtttt                                                                                                       >  1:198583/1‑237 (MQ=255)
                                                                                                                                        caccacttctttaaaaGCGGATACTCCCGCCCGGTTGGTTGCCGCGACGGCGCCCTTGCGGGCTTCCGGGCGTGTGT‑GACAGCGGC‑CCGCAAAGGGCGGTTGCGCCGCCCCAACCAGCGATACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGc                                                                                                     <  2:1112694/225‑1 (MQ=255)
                                                                                                                                         cAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATg                                                                                                                                                            >  1:1030215/1‑182 (MQ=255)
                                                                                                                                           gACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGTCGGTTGT‑GACAGCAGCGCCGC‑CTGAGCAGGGGCGCCGCCGCGACCAATGGAACCGCCGCGCCCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCATGTTTTGCTTAATCCCTCCTGCTCCTGATATTTCGTCCAGGGCACTTCCATCACTCCCGCATCTTTTTCTCAg                                                                                                 >  2:327242/1‑239 (MQ=255)
                                                                                                                                                           gATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGGGCCGCCGCGACCAATGGAACCGCCGCGGCCGTGGGACAACGTCAGCCCAATACCCGCTTTTTCGCAGGGATTGATTAATGCATCCTGTGCCTGATATTGCGACCAGGAAGCTGCAATCACTCCCCCATCTTTTGTCGGGTACGAATCGGCAatca                                                                                 >  2:325215/1‑239 (MQ=255)
                                                                                                                                                           gATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGGACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTACCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                                 >  2:120491/1‑239 (MQ=255)
                                                                                                                                                            atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGGAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCCGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                                 >  1:380892/1‑238 (MQ=255)
                                                                                                                                                            atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCCGGAAGCTGCCATCACCCCCGCCTCTTTTGCTGCTGCGGAATACCCAatca                                                                                 >  2:1039839/1‑238 (MQ=255)
                                                                                                                                                            atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                                 >  1:786479/1‑238 (MQ=255)
                                                                                                                                                            atcatcTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAatca                                                                                 >  1:784876/1‑238 (MQ=255)
                                                                                                                                                                    gCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCGGCCATCACTCCCGCCTCTTTTGGTGAGTCGGGATAGCCAATCATCACCa                                                                           >  2:398153/1‑236 (MQ=255)
                                                                                                                                                                       cTGTTCGGTTACGCGCACGCCGCCTTTCGGGCTTCCGGGGGGTGGT‑AAGAGCGGCGCCGA‑AGGGGGAGGTGCGCCGCCGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGtt                                                                     <  1:261934/239‑1 (MQ=255)
                                                                                                                                                                        tgtgcggtacgccgcAGGCCGCTTTGCCGCCTCCCTGGCGTTTGT‑GCCGCCGGCCCGCC‑ATGGGCGGGGCCGCCCCCGCGACAAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGtt                                                                     <  2:1301974/226‑1 (MQ=255)
                                                                                                                                                                         gTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGGGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGttt                                                                    >  2:394447/1‑238 (MQ=255)
                                                                                                                                                                          ttCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTg                                                                   >  2:253957/1‑238 (MQ=255)
                                                                                                                                                                          ttCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTg                                                                   >  2:1293107/1‑238 (MQ=255)
                                                                                                                                                                               ttACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGATGAGTCGGAATAGCCCATCATCCCCATCTGTTTGCCCTgc                                                             >  1:1014027/1‑238 (MQ=255)
                                                                                                                                                                                  cgcgCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGGGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTCCTGAGTCGGAAAAGCCAATCATCACCATCTGTTTGCCCTGCATc                                                          >  2:60029/1‑239 (MQ=255)
                                                                                                                                                                                   cccgcggCCGCCTCCCAGGCGTCGGGGCGGTTGC‑CACAGCGCCGCCGA‑GTGAGCGGGCGCGCCGCCGCACCAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCa                                                         <  2:1054388/234‑1 (MQ=255)
                                                                                                                                                                                    cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCCGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGGTTGCCCTGAATCAg                                                        >  2:705671/1‑239 (MQ=255)
                                                                                                                                                                                    cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTTCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAAACAg                                                        >  2:1271521/1‑239 (MQ=255)
                                                                                                                                                                                    cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGcc                                                                 >  1:977951/1‑230 (MQ=255)
                                                                                                                                                                                    cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGCGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCCGCTCAATACCCGCTTTTTCGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGACATCACTCCCGCCTCTTTTGCTGAGTCGGAATATGCCATAATCACCATATGTTTGCCCTGAAtacg                                                        >  2:749779/1‑236 (MQ=255)
                                                                                                                                                                                    cgcAGGCCGCCTTTCAGGCTTCCTGGCGGTTGG‑GACAGCAGCGCCGC‑ATGAGCATGGGCGCCGCCGCGAACAATGGAACCGACGCGACCCTGGAACAACGTCAGCTCAATAACCGCTTTTTCGAAGGTTTTGATTAATGCAACCTGTGCCTGATATTGCGCCCAGGAAGATGCCATCACTCCCCCCTGTTTTGCTGCGTGAGGATAGCCAAACATCACCATCTGTTTGCCCTGAATCAg                                                        >  2:274557/1‑239 (MQ=255)
                                                                                                                                                                                       gggCCCCTTTCCAGCCCTCCGGGCGTTTGG‑GACGGCAGCCCCGC‑GAGAGCGGGTGCCCCGCCGCGCCCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGc                                                      <  1:749779/237‑1 (MQ=255)
                                                                                                                                                                                         gccgccTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCAc                                                   >  1:1075699/1‑239 (MQ=255)
                                                                                                                                                                                             ccTTTCAGGCTCCCGGGCGTTTGA‑GACCGGCGCCCCGC‑GTGAGCAGGTGCCCCGCCGAGACCAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATa                                               <  1:673273/239‑1 (MQ=255)
                                                                                                                                                                                               ttccAGGCTCCCTGGCGGTTGT‑AACGGCGGCGCCCC‑ATGGGAGGGGCCGCCGCCGCGCCCAAGGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATAcc                                             <  1:60029/236‑1 (MQ=255)
                                                                                                                                                                                                  ccggCTTCTGGGGGTTTGT‑GACAGCACCCCCGA‑AGGGGCGGGCGCCCCGCCGCGCAAAAGGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGt                                          <  1:786143/237‑1 (MQ=255)
                                                                                                                                                                                                   aGGCTCCCTGG‑GGTTGTGGACAGCGCCCCCGC‑AGGGGCGGGTCCCCCGCCCAGCACATGGAAACCGCCGCGACCGTGGAACAGCGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGt                                          <  1:113904/238‑1 (MQ=255)
                                                                                                                                                                                                        tCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCCGTCAatat                                    >  1:368268/1‑239 (MQ=255)
                                                                                                                                                                                                        tCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCA‑CTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATAtt                                   >  1:1171110/1‑239 (MQ=255)
                                                                                                                                                                                                                 ttGT‑GACAGCCGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACCTCAGCTCAATACCCGCTTTTTTGCAGGGTTTGATTAATGCATCCTGTGCCTGATATTTGGCCCAGGAAGCGGCCATCACTCCCGCATCTTTTGCTGAGTCGGACTAGCCAATCATCACCATCTGTTTGCCCTTAATCAGGCCACGATACCAGGCAATATTGcgca                              >  2:446570/1‑236 (MQ=255)
                                                                                                                                                                                                                    ggaaCAGCGGCGCCAC‑ATGGGCGGGGGCCCCGCCGCGACCAATGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTgg                         <  1:1378109/236‑1 (MQ=255)
                                                                                                                                                                                                                            accgccgc‑AGGGCCGGGGGCCCCGCGGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCAt                    <  1:1243984/234‑1 (MQ=255)
                                                                                                                                                                                                                             gcgcCGC‑ATGAGGGGGTGCGCCGCCGCCACAAAGGAAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGAc                 <  1:398153/238‑1 (MQ=255)
                                                                                                                                                                                                                                        ggggggTGCCCCGCCGTGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCg       <  1:1207071/234‑1 (MQ=255)
                                                                                                                                                                                                                                         gCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCgtt     >  1:1025865/1‑239 (MQ=255)
                                                                                                                                                                                                                                            ggTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCgttgt   >  2:1409572/1‑238 (MQ=255)
                                                                                                                                                                                                                                              tGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCAt                                                                                                                       >  2:758479/1‑120 (MQ=255)
                                                                                                                                                                                                                                              tGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCgttgtt  <  1:1160170/237‑1 (MQ=255)
                                                                                                                                                                                                                                              tGCGCCGCCGCGACAAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCAt                                                                                                                       <  1:758479/120‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
GGTAGACATCGCAGGAGATGACTGACAGTTCATCCATAATGCGACGCCAGCTCTCTTTCGGCTCCGGCGGTGGCAGCAGGTTGGCTTCCAGAATCGCCCCGGTATAAAGCGACAGGCTGCTGACGGTGATTTCTG‑GCAGACCATATTTAAAGCGGATCATCTCGCCCTGTTCGGTTACGCGCAGGCCGCCTTTCAGGCTTCCTGGCGGTTGT‑GACAGCAGCGCCGC‑ATGAGCAGGTGCGCCGCCGCGACCAATGGAACCGCCGCGACCGTGGAACAACGTCAGCTCAATACCCGCTTTTTCGCAGGTTTTGATTAATGCATCCTGTGCCTGATATTGCGCCCAGGAAGCTGCCATCACTCCCGCATCTTTTGCTGAGTCGGAATAGCCAATCATCACCATCTGTTTGCCCTGAATCAGGCCACGATACCAGTCAATATTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTT  >  NC_000913/4151093‑4151564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A