Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F9 I0 R1 113 83.2 1840812 91.6% 1686183 224.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,158,652 T→G 12.1% V55G (GTG→GGG)  oxyR → oxidative and nitrosative stress transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,158,6520TG12.1% 299.5 / 3.3 133V55G (GTG→GGG) oxyRoxidative and nitrosative stress transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (46/66);  new base G (18/2);  total (65/68)
Fisher's exact test for biased strand distribution p-value = 4.74e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 136 total aligned reads displayed.

AATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTGG  >  NC_000913/4158414‑4158888
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            
aaTGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAgt                                                                                                                                                                                                                                              >  1:858922/1‑239 (MQ=255)
      tGATAGGGATAATCGTTCA‑TGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTATCGGGCAAATTCGTAAGCTGGAAGATAACCTGGGCGGGAGGTTGCGGGGGCGGGCCAGCCGTAAAGGgttgtt                                                                                                                                                                                                                                        >  1:284342/1‑238 (MQ=255)
         tAGGGATAATCGTTCATTGCTATTCTCCCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACTGGGGGGCATTGGCTGAACC‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCAc                                                                                                                                                                                                                                     <  1:159514/239‑1 (MQ=255)
          aGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTACCGGGCAAATTCGTAAGCTGGAAGAGGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCGGAAAAGGGTTGTTGAcc                                                                                                                                                                                                                                    >  1:381927/1‑239 (MQ=255)
              aTAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATGTTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACCCTTAGCGGGCAAATTCGTAAGCTGGAAGAGGGGCTGGGCGTGAGTTTGCTGGAGGGGACCAGCCGTAAAGGGGTGTTAACCCAgg                                                                                                                                                                                                                                >  2:58577/1‑239 (MQ=255)
              aTAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGGGTTGTTCACCCAgg                                                                                                                                                                                                                                >  1:705563/1‑239 (MQ=255)
               ttatgtttCTTTGTTTTTCTACTTACCGACATGAACTATGGTGGGGATGAAGGATGAAAAAGGAATATGCGTGATCTGGAGTACCTGGGGGCATGGGCTGAACC‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGc                                                                                                                                                                                                                               <  2:551544/233‑1 (MQ=255)
               tAATCTTTCATTGCTATCCTACCTATCGCCAGGAACTATCGTGGCGAGGGGGGTGGGATAATGAATATTGGTGATCTTGAGTACCTGGTGGCATTGGCGGAACC‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAgg                                                                                                                                                                                                                                <  1:768055/238‑1 (MQ=255)
                  tCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGGGCGGCAGATTCCTGCCACGTTAGCCAGCCGCGGCTTAGCGGGCCAATTCGTAAGCTGGAAGTTGAGCCGGCCGGGATGTTGCGGGGGCGGAGAAACGGAAAAGGGTGTGTCAACCAGGCggg                                                                                                                                                                                                                            >  2:456410/1‑239 (MQ=255)
                       cATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGCAGATGAGCTGGGCGGGATGTTGCTGGAGCGGACCAGCCGGAAAGGGTTGTTCACCCAGGGGGGaaggg                                                                                                                                                                                                                       >  2:638335/1‑236 (MQ=255)
                        aTTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGGGTTGTTCACCCAGGCGGGAAt                                                                                                                                                                                                                         >  1:329713/1‑236 (MQ=255)
                          tGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGGGAGGTTGCGGGAGCGGCCCAGCCGGAAAGTTGTGTTCACCCAGCGGGGaagggggg                                                                                                                                                                                                                    >  2:616200/1‑233 (MQ=255)
                             ttttCTACCTACCGCCATGATCTATGGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGGGGCATTGGCTGAACC‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCtgg                                                                                                                                                                                                                 <  1:148396/237‑1 (MQ=255)
                                tCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACAAGCCGTAAAGGGTTGTTCACCCAGGCGGGAATGCTGCtggtgg                                                                                                                                                                                                              >  1:766426/1‑239 (MQ=255)
                                  tcccTACCGCAAGGAACTATCGGGGGGATGGAGGATGGAAAATGAATATTCGTGACCTTGAGTCCTGGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGAt                                                                                                                                                                                                            <  1:195444/237‑1 (MQ=255)
                                  agaaccgggCCAGGAACTTTCGGGGCGATGGAGGATGGATAAGGAATATTCGGGATCTGGATTACCTGGGGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGAt                                                                                                                                                                                                            <  1:140255/231‑1 (MQ=255)
                                    ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGGGTGAGGTTGCTGGAGCGGACCACCCGTAAAGAGGTGTTCACCCAAGGGGGAAagcagggggggggaca                                                                                                                                                                                                          >  2:12619/1‑226 (MQ=255)
                                       aTCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCC‑GCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGGAAGCTTGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGTCCAGCCGTAAAGTGTTGTTCACCCAGGCGTGAGTGCTGCCGGGGGacaaggag                                                                                                                                                                                                      >  1:793584/1‑232 (MQ=255)
                                         cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGGGTTGTTAACCCAGGCGGGAATGCGGCTGGGGGATCAggggg                                                                                                                                                                                                     >  2:746253/1‑236 (MQ=255)
                                            catgaacttgcgggcgcaggggggatggaaAAGGAATGTTCGGGATCTTGGGTCCCGGGTGGGTTTGGCTGAACC‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTa                                                                                                                                                                                                  <  1:58577/217‑1 (MQ=255)
                                              tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCGGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGATCAGGCGCGGAcc                                                                                                                                                                                                >  1:46786/1‑239 (MQ=255)
                                              tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATTGTGCTGGGGGAGCAgggggggaac                                                                                                                                                                                                >  2:259545/1‑231 (MQ=255)
                                              tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTAcc                                                                                                                                                                                                >  1:615849/1‑239 (MQ=255)
                                                     tCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTTGAAGAAGAGCTGGCAGTGATGTTGCTGGAGCGGCCCAGCCGGAAAGGGTGTGTGACCCAGGCGGGAATGCTGCGGGGGGAACaaggggggaaccgggggg                                                                                                                                                                                         >  2:779540/1‑222 (MQ=255)
                                                     tCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGTTGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGGTCGGGCGCGTACCGggctgc                                                                                                                                                                                         >  1:361219/1‑239 (MQ=255)
                                                        tGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGGGTTGTTAACCCAGGCGGGAAGGGTCCTGGTGGAtacagggggaaccgggcggggtg                                                                                                                                                                                      >  2:391066/1‑217 (MQ=255)
                                                          gCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATTAGGGGCGTACCGGGCTTCGGGAg                                                                                                                                                                                    >  1:790121/1‑239 (MQ=255)
                                                          gCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAg                                                                                                                                                                                    >  1:535794/1‑239 (MQ=255)
                                                               ggaggaTGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGGGGGAGGTGaa                                                                                                                                                                               >  1:275385/1‑239 (MQ=255)
                                                                gaggaTGGATAATGAATATTCGTGATCTGGAGTCCCTGGTGGCTTGGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGaa                                                                                                                                                                               <  1:616200/238‑1 (MQ=255)
                                                                   gatggatAATGAATATTCGTTATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGGGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGATCAGGCGCGTACCGTGCTGCGTGAGGGGAAAGt                                                                                                                                                                            >  1:220206/1‑238 (MQ=255)
                                                                        atAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGGGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTAACCCAGGCGGGAATGGTGCGGGGGGATCAGGGCGGAACCGTGGTGGGGGAGGGGAAAGGCCTTaa                                                                                                                                                                      >  2:901560/1‑239 (MQ=255)
                                                                                  ttCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGGGAAAGTCCTTAAAGAGATGGCa                                                                                                                                                            >  1:152154/1‑239 (MQ=255)
                                                                                  ttCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTCCGTGAGGGGAAAGGCCTTAAAGAGATGGCa                                                                                                                                                            >  1:440499/1‑239 (MQ=255)
                                                                                    tttgttttttgggtccTGGGGGCTGTGGGTGACCACCCGCCATTTTCGGGGGGCGGGAGATTCCTGCCACGTTAGCCCGCCGGCGGTTGGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCaa                                                                                                                                                           <  2:152154/225‑1 (MQ=255)
                                                                                        aTCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGCTGTTGCTGGAGCGGACCAGCCGGAAAGTGTTGTTCACCCAGGCGGGAATGCTGCCGGCGGATCCGGCGCGTACCGTGCTGCGGGGGGGGCAAGCCCTTAAAGAAAGGGCAAGCcag                                                                                                                                                      >  2:568330/1‑239 (MQ=255)
                                                                                        aTCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGTAATGCTGCTGGGGGATAAGGCGCGTAACGTGCTGCGTGAGGGGAAAGTCCTTAAAGAGATGGCAAGCca                                                                                                                                                       >  1:266035/1‑238 (MQ=255)
                                                                                        aTCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGGCCGTACCGGGGTGCGGGGGGGGAAAGTCCTTAAAAGAATGGCAAGCca                                                                                                                                                       >  1:557171/1‑238 (MQ=255)
                                                                                        aTCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGATCAGGCGCGTACCGTGCTGCGTGAGGGGAAAGGCCTTAAAGGAAGGGCAAGCcag                                                                                                                                                      >  2:812468/1‑239 (MQ=255)
                                                                                         ttgtGAGTCCCTGGGGGCATTGGTTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCcag                                                                                                                                                      <  1:397851/235‑1 (MQ=255)
                                                                                          cTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGATCAGGCGCGTACCGTGCTGCGGGCGGTGAAAGTCTTTAAAGAGATGGCAAGCcacac                                                                                                                                                    >  1:276862/1‑236 (MQ=255)
                                                                                            tGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGCTGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGCTCAGGCGCGTACGGTGTGGCGTGAGGGAAAAGGCGTTaaaagagggggagacccccggg                                                                                                                                                  >  2:174317/1‑220 (MQ=255)
                                                                                                    tggttgCATTGGCTGATCC‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCGAGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCGGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACg                                                                                                                                          <  1:163429/239‑1 (MQ=255)
                                                                                                     tggtgcttttggttaacccccGCCTTTGCCGGCGTGCGGCCGTTTCCGGCCACGTTAGCCAGCCGACGCTTAGGGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACg                                                                                                                                          <  2:46786/220‑1 (MQ=255)
                                                                                                     ggtggCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAAGCGCGGACCGTGCTGCGTGGGGTGAAAGGCCTTAAAGATGTGGCAAGCAAGCGGGGGGAGACgg                                                                                                                                         >  2:775876/1‑238 (MQ=255)
                                                                                                     ggtggCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGGTCAGGCGGGGACCGTGCTGCGGGGGGGGAAAGGCCTTAAAGGGATGGGAACCCAACAggggggagaag                                                                                                                                         >  2:557816/1‑231 (MQ=255)
                                                                                                            ttGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCAAGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGACTGCTGCTGGTGGATCAGGCGCGGACCGTGCTGCGTGAGGGGGAAGGCCTTAAAGGGGAGGCAGGCCAGCAGGGCGAGACGAGGTCCg                                                                                                                                   >  1:224688/1‑238 (MQ=255)
                                                                                                             tGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGGGGATCAGGCGCGTACCGGGCTGCGTGAGGGGAAAGGCCTTAAAGAGAGGGCAAACCAGCGGGGCGAGAGGATggcggg                                                                                                                                  >  2:469636/1‑233 (MQ=255)
                                                                                                               ggcgaacccccGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGAc                                                                                                                                <  1:253311/230‑1 (MQ=255)
                                                                                                                 ggacca‑cCGCCATTTTCGGCGTGCGGTAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCg                                                                                                                              <  1:859154/234‑1 (MQ=255)
                                                                                                                  gAACC‑CCGCCATTTTCGGCGGGCGGCCGATTCCTGCCAAGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCt                                                                                                                            <  1:557816/239‑1 (MQ=255)
                                                                                                                         cGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGGGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAAATGGCAAGCCAGCAGGGCGAGCCGATTTCCGGACCGCTggccat                                                                                                                      >  1:189684/1‑234 (MQ=255)
                                                                                                                             tttttCGGGGGGCGGAAGTTTCCTGCCCCGTTAGCCAGCCGACGCTTAGCGGGAAAATTCGTAAGCTGGAAGATGGGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGt                                                                                                                  <  1:203012/238‑1 (MQ=255)
                                                                                                                                      gtgggggatgttccgtccgtgTTACCCCGCCGGCGGTTGGGGGGAAAATTCGTAAGCTGGAAGGTGAGGTGGGGGTGATGTTGCTGGGGGGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTcc                                                                                                          <  2:280999/218‑1 (MQ=255)
                                                                                                                                      gggtggCAGATGCCGGGCACGTTAGCCGGGGGAGGATTGGGGGGAAAATGCGAAGGGTGGAGAATGAGCTGGGCGGGAGGGGGGGGGAGCGGACAAGCCGGAAAGTGTGGTGCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTcc                                                                                                          <  2:615849/234‑1 (MQ=255)
                                                                                                                                      gTGGGGCAGATTCCTGCCACGTTAGCCAGCCGACGTTTAGCGGGCAAATTCGTAAGCTGGAAGAGGGGCTGGGCGTGAGTTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTcc                                                                                                          <  1:456410/238‑1 (MQ=255)
                                                                                                                                      gTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTccc                                                                                                         >  1:742780/1‑239 (MQ=255)
                                                                                                                                      gTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTcc                                                                                                          <  1:746253/238‑1 (MQ=255)
                                                                                                                                      gTGCGGCAGATTCCGGGCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTcc                                                                                                          <  1:840711/238‑1 (MQ=255)
                                                                                                                                         cGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgtt                                                                                                                                                                                                                                           >  1:91267/1‑106 (MQ=255)
                                                                                                                                           gctgtttCCTGCCACTTTGGCCGGCGGATGTTTGGCGGGCAAATTCGGAGGCTGGAAGATGAGCTGGGGGGGATGTTGATGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGt                                                                                                    <  2:220206/234‑1 (MQ=255)
                                                                                                                                            cAGTTTCCTCCCACGTTATCCAGCCGACTCTTAGCGGGAAAATTCGTAAGCTGGAAGATGAGCTGGGCGGGATTTGGCGGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTTGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGt                                                                                                    <  2:597619/238‑1 (MQ=255)
                                                                                                                                               ttccctcccatgtggcccggccGACGCTTGGGGGGCAAATGAGTAAGCGGGAAGATGAGCGGGGGGTGGTGTTGCGGGGGGGGCCCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTgg                                                                                                 <  2:402156/219‑1 (MQ=255)
                                                                                                                                                ttCCTGGCACGTTAGCCGGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGGTATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGa                                                                                                <  1:174317/238‑1 (MQ=255)
                                                                                                                                                ttCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGa                                                                                                <  1:827756/238‑1 (MQ=255)
                                                                                                                                                tcccgccccagTTGGCCAGCGGGCGGTTGGGGGGAAAATTCGTAAGCTGGAAGATGGGCGGGGCGTGGTGGTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGa                                                                                                <  2:707739/228‑1 (MQ=255)
                                                                                                                                                      ccACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGACTGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGTGGGGGAAGTCCTTAAAGAGAAGGGAACCCGGCAGGGGGAGACGCTGTCCGGAGCCCGGAACCATGGCTTGTATTCCACAGTTTGACCgagcc                                                                                         >  2:796434/1‑235 (MQ=255)
                                                                                                                                                       cACGTTAGCCAGCCGCCGTTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGGTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTAcc                                                                                         <  1:638335/238‑1 (MQ=255)
                                                                                                                                                        ccGTTTGCCAGCCGGCGTTTGGCGGGAAAATTCGTAAGGTGGAAGGTGGGCGGGGGGTGATGGTGCTGGGGCGGGCCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTg                                                                                       <  2:858922/238‑1 (MQ=255)
                                                                                                                                                         cGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGGCCGGCCCGCCGCACATTGGTTTGATTCCCACAGTTGGACCGGACCGGc                                                                                      >  2:365373/1‑239 (MQ=255)
                                                                                                                                                             ggccgcccggggtttaggggcaaaaTTGGAAAGCGGGAAGAGGGGGTGTGGGGGTGGTCGCGGGAGCGGACCAGCCGTAAAGTGTTGTTCCCCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTAcc                                                                                  <  2:788031/217‑1 (MQ=255)
                                                                                                                                                              gccggcgggcgtttAGGGGGCAAATTCGTAAGCGGGAAGATGGGCTGGGCGTGAGGTTGCTGGAGGGGCCCAGCCGTAAAGTGTTGGTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCg                                                                                 <  2:807255/227‑1 (MQ=255)
                                                                                                                                                              gccaggccgctgtttgggggCAAATTCGTAAGGGGAAAAGTGAGGGGGGCGGGATGGTGTGGGGGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAGGAGATGGAAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCg                                                                                 <  2:404610/222‑1 (MQ=255)
                                                                                                                                                              ccctgccGGCGGTTGGGGGGCAATTGCGTAAGCTGGAAGATGAGCTGGGCGTGAGGTTGCTGGGGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCg                                                                                 <  2:183459/235‑1 (MQ=255)
                                                                                                                                                                   cgggcggttggggggAAAATTCGTACGCTGGAGGATGAGCTGGGCGTGATGTTGCTGGAGGGGACCAGGCGTAAAGTGTTGGTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGGTTCCCACAGTTGGACCGTACCTGCTACCGCatat                                                                            <  2:557171/227‑1 (MQ=255)
                                                                                                                                                                    cGAGGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCatat                                                                            <  1:775876/238‑1 (MQ=255)
                                                                                                                                                                        gtttAGCGGGGAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATcc                                                                       <  1:320235/237‑1 (MQ=255)
                                                                                                                                                                        gCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCatat                                                                            <  1:729808/234‑1 (MQ=255)
                                                                                                                                                                         cTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGGGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCAACATGGTTTGATTCCCACAGTTGGACCGAAACCGCTACGGCCTCTTATc                                                                        >  1:218935/1‑237 (MQ=255)
                                                                                                                                                                             gaggtgaaaTTCGAAAGTGGGAAGATGCGTTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAACGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTAtg                                                                  <  1:812996/233‑1 (MQ=255)
                                                                                                                                                                               gggCAATTGTGTAAGCTGGAATGTTGGCTGGGTGGGATGTTGCGGGGGCGGACCGGCCGTAAAGGTTTGTTCACCCAGGCGGGAATGCTGCGGGTGGAACAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAATCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTAtgc                                                                 <  2:266035/238‑1 (MQ=255)
                                                                                                                                                                               ggcgaaaTGCGTAAGCTGGAAGATGAGCGTGGCTTGATGTTCCTGGAGCTGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTAtgc                                                                 <  1:546431/234‑1 (MQ=255)
                                                                                                                                                                                                ggAAGATGAGCGGGGGGTGTGGTTGCTGGAGCGGGCCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCaa                                               <  1:391066/239‑1 (MQ=255)
                                                                                                                                                                                                    tttataagggacgggtttttGCGGGGGCGGCCCGGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCt                                           <  2:249596/221‑1 (MQ=255)
                                                                                                                                                                                                        aGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCCGGGCGAGACGATGTCCGGACACCTGCACATTGGTTTGGTTCCCACATTTGGACCGGACCTGCTACCCCCAATTATCCCCTTTTTGCCCCAACCCTTTCCACACCTGGaa                                       >  2:712198/1‑239 (MQ=255)
                                                                                                                                                                                                               cGTGTTGTTGCTGGGGCGGCCCGGCCTGAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTAt                                 <  2:157103/238‑1 (MQ=255)
                                                                                                                                                                                                               cGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGGGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCAATTTATCCCTATGCTGCACCAGACCTTTCCAACGCTGCAAATGTa                                  >  1:820457/1‑237 (MQ=255)
                                                                                                                                                                                                                  gATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGGCCCGTGCTGCGTGAGGGGAAAGTCCTTAAAGCGATGGCAATCCAACAGGGCGAGACGATGTCCGGGCCGCTTCACATTGGTTTGATTCCCACCGTTGGACCGTACCTGCTACCGCACATTATCCCTATGCTCACCCCAACCTTTCCCAGACGGGAACTGTAACTGc                             >  2:143772/1‑239 (MQ=255)
                                                                                                                                                                                                                     gTTGCTGGATCGGACCAGTCGTAAATTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGGTCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGGGACGATGTCCGGACCGGTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATg                          <  1:779540/239‑1 (MQ=255)
                                                                                                                                                                                                                           gggggggtccAGGCGTAAAGTGGTGTTCCCCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGcac                    <  2:275385/231‑1 (MQ=255)
                                                                                                                                                                                                                             aGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATcctgtctcttttaca                  >  1:249596/1‑225 (MQ=255)
                                                                                                                                                                                                                               cGGCCCAGCCTTAAGGTGTTTTTCCCCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGGGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGAc                <  2:742780/239‑1 (MQ=255)
                                                                                                                                                                                                                                 ggccAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGAcc               <  1:498337/236‑1 (MQ=255)
                                                                                                                                                                                                                                  ccctgCCGTAAAGTGTTGTTCACCCAGGGGGGAATTGTGCTGGTGGATCAGGCGGTTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCCGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATGCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACcca             <  2:753333/235‑1 (MQ=255)
                                                                                                                                                                                                                                   ccAGGCGTAAAGTGTTGGTCCCCCAGGGGGGAATGCTGATGGTGGATCAGGCGCGTACCGTGCTTGGTGGGGTGAAAGGCCTTAAAGATATGGGAAGCCAGCAGGGCGGTGCGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACcca             <  2:224688/238‑1 (MQ=255)
                                                                                                                                                                                                                                    cAGCCGTAAAGGGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACccacc           <  1:712198/239‑1 (MQ=255)
                                                                                                                                                                                                                                            aaGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGGGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGAGGGCCGGACCGCTGCCCATTGGTTTGATTCCCACAGTTGGACCGTACCTGCAACCGCCTATTATCCCTATGCCGCACCAGACCCTTCCAAAACTGGAAAAGAGAATGCATTAAAAACAGACCAACCAATTACTg   >  2:123228/1‑239 (MQ=255)
                                                                                                                                                                                                                                             aGTGTTGTTCACCCAGGCGGGAATGGTGCGGGTGGATCAGGCGCGTACCGTGCTGCGGTAGGTGAAAGGCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCAAATTGGTTTGCTTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTgg  <  1:435786/239‑1 (MQ=255)
                                                                                                                                                                                                                                             aGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTgg  <  1:47188/239‑1 (MQ=255)
                                                                                                                                                                                                                                             aGTGTTGTTCACCCAGGCGGGAATGCTGCGGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTgg  <  1:796434/239‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            
AATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACA‑CCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTGG  >  NC_000913/4158414‑4158888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A