Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 647,210 A→C 18.4% G100G (GGT→GGG)  citG ← 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913647,2100AC18.4% 228.0 / 4.3 108G100G (GGT→GGG) citG2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase
Reads supporting (aligned to +/- strand):  ref base A (58/24);  new base C (4/20);  total (63/45)
Fisher's exact test for biased strand distribution p-value = 2.98e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 108 total aligned reads displayed.

GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGC  >  NC_000913/646974‑647441
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                        
gcgcCGGTAAGGCCAAGCTGTGGGTACACCCGTGGACCTGCCGTCAGTTGGAAATTATGGGTACGCAGTTGGCGATCGGTCAGGCCACGGCAGAACCTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCAc                                                                                                                                                                                                                                         <  2:453491/238‑1 (MQ=255)
gccccGGTGAGGCAAAGGTTTTGTGACACCCGTGGCCCGGCCGTCAGTTGGGATTTATTGGGACGCAGTGCGCGATCGGTCAGGCCACGGCAGAAACTGGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCAc                                                                                                                                                                                                                                         <  2:376494/235‑1 (MQ=255)
cgcccGGAAAGGCCAAGCTGTTGGTACAACCGTTGGCCTGCCGTAAGTGGTGAATTATTGGTACGCAGTTCGGGATCGGTCAGGCCAGGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAGCATATCAc                                                                                                                                                                                                                                         <  1:102746/235‑1 (MQ=255)
       tAAGCCCAAGCTGTTGGTACACCCGTTGCCCTGCCGTCATTTGTGAATTATTGGTACGCAGTTCGAGAGCGGTCAGGCCACGGCAGAAACTGGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑a                                                                                                                                                                                                                                 <  1:1232408/238‑1 (MQ=255)
              aaGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCCCATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATCCCTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTTGC‑AAGccctc                                                                                                                                                                                                                          >  1:880622/1‑235 (MQ=255)
                  tgtgGGTAAAACCGTTGACCTGGCGTCGGTTGTAAATTATGGGTACGGAGTTCGCGATCGGTCAGGCCACGGCAGAATCTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAAt                                                                                                                                                                                                                     <  1:140849/239‑1 (MQ=255)
                   ttgtgTACACGCGTTGACCGGCCGTACGTTGTGAATTATGGGTACGATGTTCGCGATCGGTCAGGCCGCGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAAt                                                                                                                                                                                                                     <  1:573834/234‑1 (MQ=255)
                    ttGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGGG‑TTTACGCCCGCAATGGCGCGGAACATACACCCTTCCC‑AAGCCATCCCAACTg                                                                                                                                                                                                                   >  2:24549/1‑239 (MQ=255)
                         aaaaCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATGGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGt                                                                                                                                                                                                              <  1:1107316/237‑1 (MQ=255)
                         aCAACCTGTGACCGTCCGGCCTTTGTGAATTATTGGTACGATGTTGCGGATCGGTCAGGCCCCGGAAGAACCTGTCCGCCGTAGAACAAC‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGt                                                                                                                                                                                                              <  1:1217896/239‑1 (MQ=255)
                            aCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGGGTG‑TTTACGCCCGCAGTGGCCCGGAAAATATCACCTTCGC‑CACCCCAACCAATTTGGCGGaa                                                                                                                                                                                                            >  2:703326/1‑238 (MQ=255)
                            aCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACAGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGGT‑GTTACGCCCGCAGTGGCGCGGGACAAATCCCCTTCGC‑AAACCATACCAATTGGGCGGaa                                                                                                                                                                                                            >  2:1268117/1‑238 (MQ=255)
                                ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGGGTAATCCgg                                                                                                                                                                                                       >  2:1215590/1‑238 (MQ=255)
                                ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGt                                                                                                                                                                                                       >  1:911970/1‑239 (MQ=255)
                                 tGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACCCCCGCAGTGGCGCGGAACAAATCACCTTCGA‑AACCCATACCAATTTGGCGGAATCCggg                                                                                                                                                                                                      >  2:326342/1‑237 (MQ=255)
                                 tGACCTGCCGTCAGTTGATAATTATTGGTCCGCAGTTCGCGATCGGTCGGGCCACGTAAGAAACTTGCCGCCGTAGAACAAC‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTg                                                                                                                                                                                                      <  1:1135011/239‑1 (MQ=255)
                                  gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAGGAAAAAATGCTGCCTTTATGCATG‑TTTACGCCCGCAGGGGCCCGGAACAAATCCCCTTGCC‑ACGCCATACCAATTTGGCGAAATCCgggg                                                                                                                                                                                                     >  2:1377502/1‑239 (MQ=255)
                                  gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATACCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTgg                                                                                                                                                                                                     >  1:410587/1‑239 (MQ=255)
                                       ggttaaaagaaacagttattGGTACGCAGTCCGGGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTAc                                                                                                                                                                                                <  1:912746/224‑1 (MQ=255)
                                       gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAgga                                                                                                                                                                                                 >  1:1245978/1‑236 (MQ=255)
                                             aGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTc                                                                                                                                                                                          >  1:1304688/1‑239 (MQ=255)
                                                  tgAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGGGTACCGCTTCTGGt                                                                                                                                                                                      >  1:36794/1‑238 (MQ=255)
                                                  tgAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGt                                                                                                                                                                                      >  1:1042330/1‑238 (MQ=255)
                                                        atgtgttcGCAGTTCGCGATCGGTCAGGCCCCGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAAATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCAttt                                                                                                                                                                               <  1:971923/232‑1 (MQ=255)
                                                         ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAAt                                                                                                                                                                                                                     >  1:303434/1‑200 (MQ=255)
                                                         ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTCCCGccttcctcttttacac                                                                                                                                                                              >  1:101979/1‑224 (MQ=255)
                                                         ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCCCTTCCGGGGCCAttt                                                                                                                                                                               >  1:1141523/1‑238 (MQ=255)
                                                              aCGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCCCATAGCACCCCTAAAGAAAAAATGCTGCCTTTATGCGTC‑TTTACCCCCGCAGTGGCGCCGAACATATCACCTTCGC‑AAGCAATACCAATTGGCCGCAATCCTTGTGGTACCGCTTCCTGTCCCATTTCCGcc                                                                                                                                                                          >  2:80950/1‑237 (MQ=255)
                                                              aCGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCAc                                                                                                                                                                         >  1:1355834/1‑239 (MQ=255)
                                                               cGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACt                                                                                                                                                                        >  1:866758/1‑239 (MQ=255)
                                                                 cAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGGGTAAACCGGGGGGTACGCCTTCTGGGGcggtccctttaaaac                                                                                                                                                                      >  2:912746/1‑225 (MQ=255)
                                                                   gTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGGGGAGTACCGCTTCTGGTGCCATTTCCCCCCTACaa                                                                                                                                                                    >  2:416206/1‑238 (MQ=255)
                                                                    ttCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTAccg                                                                                                                                                                    >  1:515460/1‑236 (MQ=255)
                                                                    ttCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAg                                                                                                                                                                    >  1:217174/1‑238 (MQ=255)
                                                                      cgcgATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCCTACCAATTGGGCGTAATCCGTGGAGTACCGCTCCTGTGGCCATTTCCGCACTAAAGGc                                                                                                                                                                  >  1:1190648/1‑238 (MQ=255)
                                                                            cGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAAt                                                                                                                                                           >  1:213693/1‑239 (MQ=255)
                                                                                    ccgggaaaaaattggcggcgcgTAGAACAAA‑GGGTTGTCGGCGTGCCCGGTTGGTGGAGTTGAAGCAAACGGCCAATCGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGGGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa                                                                                                                                                   <  2:1101940/219‑1 (MQ=255)
                                                                                     cACGGCAAAACTTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa                                                                                                                                                   <  1:326342/238‑1 (MQ=255)
                                                                                     cACGGCAAAAACTTGCCCCCGTAAAAAAAC‑CGGTTGTTGGCTTTACCGGTTGTTTGAGTTGAAGCAAACGGCCAATGCCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa                                                                                                                                                   <  1:394098/238‑1 (MQ=255)
                                                                                     cACGGAAAAAACTGGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCAAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaaa                                                                                                                                                  <  1:1076607/239‑1 (MQ=255)
                                                                                       cGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGCACATATCACCTTCGC‑AAGCCATACCCATTGGGCGTAATCCGTGGGGTACCGCTTCTGGGCCCCTTTCCGCACTACAGGCACCAAATTCAATGCAACg                                                                                                                                                >  2:158530/1‑239 (MQ=255)
                                                                                       cGGCAGAAACTGGCCGCCGTAGAACAAA‑CTGTTGGTGGCGTTACCGGTTGGTTGAGTGGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa                                                                                                                                                   <  1:180073/236‑1 (MQ=255)
                                                                                        ggCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGGG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCACTTGGGCGTAATCCGTGGGGTACCGCTTCTGGTGCCATTTCCGAACTACAGGCACCAAATTCCATGAAACgg                                                                                                                                               >  1:81773/1‑239 (MQ=255)
                                                                                         gCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGACCCAAATTCAATGAAACggg                                                                                                                                              >  1:1159402/1‑239 (MQ=255)
                                                                                         caaaaattttGCCGCCGTAAAAAAAA‑GGGTTTTTGGGGTTACCGGTGGGTGGAGTTGAAGCAAACGGCCAATTGCCGCACAAAGCAGCCCAAAAGAAAAAATGCTGCCTTTAGGCGTG‑TTTACGCCCGCGGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACggg                                                                                                                                              <  2:1304688/231‑1 (MQ=255)
                                                                                             aaaCTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATACTGCCTTTATGCGTG‑TTTACGCCCGCAGTGCCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGGGTACCGCTTCTGGTGCCATTTCACCACACCAGGCCCCAAATTCAATCAAACGGGGtg                                                                                                                                           >  2:417101/1‑237 (MQ=255)
                                                                                              acctggccgccGAAAAACAAC‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAGGCTGCCTTTAGGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc                                                                                                                                         <  1:158530/234‑1 (MQ=255)
                                                                                               atttGCCCCCCTAAAAAAAACCGGTTGTTGGCGTTCCCGGTTGGTTGAGTGAAAGCAACCGTCCAATTGCCGCAAATGGCAGCCGTAAAAAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGGGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc                                                                                                                                         <  2:1159402/237‑1 (MQ=255)
                                                                                                  tGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAACGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACCTATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGGGTACCCCTTCTGGGGCCATTTCCGCCCTACAGGCCCCAAATTCAATGAAACGGGGGagccag                                                                                                                                      >  2:523692/1‑238 (MQ=255)
                                                                                                              aCAAA‑GGGTTGGTGGGGTAACCGGTTGGTTGAGTGGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAAGGTTGCCTTTAGGCGTG‑TTTACGCCCGCAGGGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCa                                                                                                                         <  1:184994/239‑1 (MQ=255)
                                                                                                                  a‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCCCTACAGGCACCAAATTCAATGAAACGGGGGAGCCACCCCTGaaccccccacg                                                                                                                      >  2:632804/1‑229 (MQ=255)
                                                                                                                      gtttttGGGTTTCCCTGTTGTTTGGTTTGAAACAACCGGCCATTTCCCCCAAATAGCAGCCCAAAAAAAAAAATGCTGCCTTTAGGCGTG‑TTTCCGCCCGAAGGGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAgcgcgc                                                                                                                   <  2:481581/238‑1 (MQ=255)
                                                                                                                                 taacGGTTTGTTGGGTTAAAGCAACCGGCCAATTGCCGCACATAGAAGCCATAAAGAAAAAATGCTGCCTTTAGGCGTG‑TTTACGCCCGCAGTGGCGCGAAACATAGCACCTTCCC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGGCAGCCCTGAATCGCCAGCGCGCTGCGGTGGaaa                                                                                                        <  1:494903/235‑1 (MQ=255)
                                                                                                                                 tACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTCCGGTGGaa                                                                                                         >  1:481581/1‑237 (MQ=255)
                                                                                                                                         ggttgAGTTGAATCAAACGGCAAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTTCCTTTAGGCGTT‑TTTACGCCCGCAGTGGCGCGG‑ACATATCACCTTCGC‑AAGCCATTCCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg                                                                                              <  1:364887/239‑1 (MQ=255)
                                                                                                                                         ggttgAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCTCGCTGCGGGGGAAATCTTCCAg                                                                                                >  1:1185755/1‑238 (MQ=255)
                                                                                                                                          gttgggttgaAACACACGGCCAATTGCCCCACATCGCAGCCCTAAAGAAAAAATGCTGCCTTTCAGCGTT‑TTTGCGCCCGCAGTGGCGGGGAAAATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg                                                                                              <  1:426142/239‑1 (MQ=255)
                                                                                                                                          gttgagttgaAGCAAACCGCCAATTGCCGCAAATGGCCGCCCTAAAAAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg                                                                                              <  1:416206/239‑1 (MQ=255)
                                                                                                                                                ttgaAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGGGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCCGCCCTGAAACGCCCGCGCGCTGCGGTGGAAAACTTCCAACGCCata                                                                                         >  2:1179207/1‑238 (MQ=255)
                                                                                                                                                tataagagacgggCCAATTGCCGAAAAAAGCAGCCCTAAAGAAAAAATGCGGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCata                                                                                         <  1:42009/227‑1 (MQ=255)
                                                                                                                                                         aCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTCCAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCCAATCTTTGTgc                                                                                >  1:612265/1‑238 (MQ=255)
                                                                                                                                                         aCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGCAACGGGGTAGCCAGCCCTGAATCCCCAGCGCGCTCCGTGGGAAATCTTCCAGCGCCATATCTTTGTgc                                                                                >  1:1099244/1‑238 (MQ=255)
                                                                                                                                                            gCCAATTGCCGAACATAGCACCCCTAAAGAAAAAATGCTGTCTTTATGCGTG‑TTTACGCCCGGAGTGGCGCGGAACATACCACCGTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc                                                                            <  1:1350336/239‑1 (MQ=255)
                                                                                                                                                             ttgataaggacaagtAGCAGCCCTAAAGAAAAAATGCCGCCTTTAGGCGTT‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACAGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc                                                                            <  1:1012405/224‑1 (MQ=255)
                                                                                                                                                             ccAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCGTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAAACTTCCAGCGCCATATCTTTGTgcctgg                                                                            >  1:1011310/1‑234 (MQ=255)
                                                                                                                                                                aTTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCa                                                                        >  1:283892/1‑239 (MQ=255)
                                                                                                                                                                 tccccGCACATACCCGCCCTAAAGAAAAATTGTTCCTTTTATGGGTT‑TTTCGGCCGGCGGGGGCGGGAAACATACCCCTGTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAg                                                                       <  2:588049/236‑1 (MQ=255)
                                                                                                                                                                       cacaTAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAACCCTGAATCGCCACCCCGCTGCGGGGGAAACCTTCCGGCGCCAAAACttttgcggcctggcccttatac                                                                 >  2:42009/1‑220 (MQ=255)
                                                                                                                                                                         caTAGCATCCCTAAAGAAAAAATGCGGCCTTGAGGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCg                                                               <  1:1268117/239‑1 (MQ=255)
                                                                                                                                                                          atgacagcCATAAAGAAAAAATGCTGCCTTTAGCCGTT‑TTTACGCCCGCAGGGGCCTGGAACATATCCCCTTCCA‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGa                                                              <  1:1015652/235‑1 (MQ=255)
                                                                                                                                                                            agcagcCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTCCAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATAGCCAACGCGCGGCGGTGAAAATCTTCCAGCGCCATCTCTTTGCTCACACCCCCGTTAATTGGATc                                                            >  2:470353/1‑239 (MQ=255)
                                                                                                                                                                                ccctaaaaaaaaaaaGGCTCCCTTTAGGCTTT‑TTTCCGCCCG‑GGGGGGGCGGAAACAATACCCTTCCCGAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg                                                        <  2:612265/234‑1 (MQ=255)
                                                                                                                                                                                 cccTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc                                                                            <  1:273881/218‑1 (MQ=255)
                                                                                                                                                                                 cccTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc                                                                            >  2:273881/1‑218 (MQ=255)
                                                                                                                                                                                 cccTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCCCCACCGCGCTGCGGTGGAAATCTTCCAGCGCCCTATCTTTGTGCGCACCCCAGGTAAAGGGACCCACGa                                                       >  2:1157332/1‑239 (MQ=255)
                                                                                                                                                                                    tAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCCCgggg                                                     >  1:766381/1‑238 (MQ=255)
                                                                                                                                                                                    tAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCACCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATACACGAgg                                                     >  1:1239103/1‑238 (MQ=255)
                                                                                                                                                                                    ctaaaaaaaaaTTCCGTCTTTTTGGGTGTTTTCCCCCCGGGGGGGCGCGAAACTACTCCCCTTCCA‑AAGCCATACCAATTGGGCTTAATCCGTGGAGTCCCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAgg                                                     <  2:283892/234‑1 (MQ=255)
                                                                                                                                                                                      aaGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCCCTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCAAGCCCCCTGCGGGGGAAATCTTCCAGCGCCATATCTTTGTGCCCCCCCCGGTTaagcggaaccacgggcccg                                                  >  2:502858/1‑222 (MQ=255)
                                                                                                                                                                                      aaGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCatat                                                                                        >  1:212165/1‑201 (MQ=255)
                                                                                                                                                                                      aaGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATTTCTTTGTGCGCCCCGCAGTTAATGGGATCCACAGGGccc                                                  >  2:1320364/1‑238 (MQ=255)
                                                                                                                                                                                      aaGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTTTGCGCACCCCCGTTAATGCGGTCCACCAgg                                                     >  2:794313/1‑236 (MQ=255)
                                                                                                                                                                                      aaGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCACGCCGCTGCGGTGTAAATATTCCAGGGCCAAACCTTTTGGCGCCCCGCCGTTaagacgttgtctttaaacc                                                  >  2:1012405/1‑222 (MQ=255)
                                                                                                                                                                                         aaaaaaGGCTGCCTTTAGGCGTT‑TTTCCGCCCGCAGTGGCGCGGAACATATCTCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGt                                               <  1:1230182/239‑1 (MQ=255)
                                                                                                                                                                                           aaaaTGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGGAGTCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCCCTACCGGCACCAAATTCAATGAAACGGGGAGACAAGCCCTGAATCGCCAGCGCGCGACGCGGGAAAACTTCCAGCGCCGTACCTTTTTGGCCCCCGCCGTAAATGCAATccccacaccccggttt                                             >  2:784460/1‑225 (MQ=255)
                                                                                                                                                                                                  tgcCTTTAGGCGTG‑TTTACGCCCGCAGGGGCGCGGAAAATACCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGa                                       <  1:703326/238‑1 (MQ=255)
                                                                                                                                                                                                   gcCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCCCGAGGCCTGGTTTCGGTggaa                                     >  2:274119/1‑236 (MQ=255)
                                                                                                                                                                                                   gcCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCCCGAGGCCTGGTTTCGGTGACa                                     >  1:753585/1‑239 (MQ=255)
                                                                                                                                                                                                       ttATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCg                                                                                                               >  1:744538/1‑161 (MQ=255)
                                                                                                                                                                                                            ggggttttCCGCCCGCAGGGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACt                             <  1:274119/234‑1 (MQ=255)
                                                                                                                                                                                                            cGTG‑TTTACCGCCGCAGGGGCGCGGAACATTTCCCCTTCCC‑AAGCCATACCAATTGGGCGTACTCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACt                             <  1:1091695/238‑1 (MQ=255)
                                                                                                                                                                                                                 tttACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtcag                         >  1:854934/1‑238 (MQ=255)
                                                                                                                                                                                                                 tttACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGGGCCAGATTGACTtcagc                        >  1:246320/1‑238 (MQ=255)
                                                                                                                                                                                                                           cAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCCCCAGGCCTGGTTTCGGGGAAAGATTGCCTTCAGCCAGCATGgcg              >  2:851336/1‑239 (MQ=255)
                                                                                                                                                                                                                               gggcgggaaattatCCCCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGGACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGgcgcgc           <  1:523692/227‑1 (MQ=255)
                                                                                                                                                                                                                               ggCGGGGAACATATCCCCTTCGA‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGgcgcgc           <  1:851336/238‑1 (MQ=255)
                                                                                                                                                                                                                                  ggggACCATTTCCCCTCCGC‑AAGCCATACCATTTGGGCGTAATCCGTGGAGTACCGCTCTTGGGGCCATTCCCGCACTACAGGCCCCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGccag        <  2:36794/236‑1 (MQ=255)
                                                                                                                                                                                                                                     gAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGAGGTGGAAATCTTCCAGCGCCCTATCTTTCTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGGGACAGCTTTACTTCAGTCAGAAGGGCGGGcccgccaa    >  2:405270/1‑237 (MQ=255)
                                                                                                                                                                                                                                       aCATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGGGGAGTACCGCTTCGGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGccagcccagc  <  1:1246277/239‑1 (MQ=255)
                                                                                                                                                                                                                                       aCATAACACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGccagcccagc  <  1:794313/239‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                        
GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAA‑CGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTG‑TTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGC‑AAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGC  >  NC_000913/646974‑647441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A