Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F1 I2 R1 760 52.7 2744488 90.2% 2475528 105.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,732,319 G→A G40E (GGG→GAG)  xylG → D‑xylose ABC transporter dual domain ATPase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,732,3190GA100.0% 237.0 / NA 74G40E (GGG→GAG) xylGD‑xylose ABC transporter dual domain ATPase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (37/37);  total (37/37)

GCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGGGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAA  >  NC_000913/3732184‑3732442
                                                                                                                                       |                                                                                                                            
gCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTc                                                                                                                           <  1:1065288/139‑1 (MQ=255)
          aGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCa                                                                                                                >  1:921789/1‑139 (MQ=255)
                       tATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAg                                                                                                   >  1:996173/1‑139 (MQ=255)
                        aTCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGc                                                                                                            >  2:696319/1‑129 (MQ=255)
                        aTCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGc                                                                                                            <  1:696319/129‑1 (MQ=255)
                        aTCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGt                                                                                                  >  1:783991/1‑139 (MQ=255)
                         tCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 >  2:820568/1‑139 (MQ=255)
                         tCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 <  2:1226404/139‑1 (MQ=255)
                           tACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               <  2:499923/139‑1 (MQ=255)
                           tACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               <  1:361237/139‑1 (MQ=255)
                           tACTTGAAATGAAGAACACTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               <  2:921789/139‑1 (MQ=255)
                            aCTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCt                                                                                                           >  2:979766/1‑126 (MQ=255)
                            aCTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTCATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCt                                                                                                           <  1:979766/126‑1 (MQ=255)
                             cTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgt                                                                                             >  1:1197493/1‑139 (MQ=255)
                              ttGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgtg                                                                                            <  2:853759/139‑1 (MQ=255)
                              ttGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgtg                                                                                            >  2:1082669/1‑139 (MQ=255)
                                      aagaaCATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTAttt                                                                                    <  2:783991/139‑1 (MQ=255)
                                           cATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAATGGAGTCTGGT‑AAATCAACCCTGAGGAAAGGGCTTGGTGGTATTTATccc                                                                               >  1:688298/1‑139 (MQ=255)
                                           cATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 >  1:486376/1‑121 (MQ=255)
                                           cATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 <  2:486376/121‑1 (MQ=255)
                                             ttACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCa                                                                             <  1:820568/139‑1 (MQ=255)
                                             ttACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCa                                                                             <  2:996173/139‑1 (MQ=255)
                                             ttACCAAAAACTTCGGCAGTGTGGAGGCGAATGGTAACGTCTGCTTGCGGTTGAATGCTGGCCAAATCGTCTCCCTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCa                                                                             <  2:688298/139‑1 (MQ=255)
                                              tACCAATACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACACTGATGAAAGTGCTGTGTGGTATTTATCCCCAt                                                                            >  1:548061/1‑139 (MQ=255)
                                              tACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCAt                                                                            <  2:1197493/139‑1 (MQ=255)
                                                   aaaCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTc                                                                                                                           <  2:381124/88‑1 (MQ=255)
                                                   aaaCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTc                                                                                                                           >  1:381124/1‑88 (MQ=255)
                                                   aaaCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGaaa                                                                                                    <  1:750537/110‑1 (MQ=255)
                                                   aaaCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGaaa                                                                                                    >  2:750537/1‑110 (MQ=255)
                                                   aaaCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTc                                                                       >  2:1075227/1‑139 (MQ=255)
                                                     aCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCtgatg                                                                                                       <  2:1188886/105‑1 (MQ=255)
                                                     aCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCtgatg                                                                                                       >  1:1188886/1‑105 (MQ=255)
                                                     aCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 >  1:46841/1‑111 (MQ=255)
                                                     aCCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 <  2:46841/111‑1 (MQ=255)
                                                          cGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgtg                                                                                            >  1:339178/1‑111 (MQ=255)
                                                          cGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgtg                                                                                            <  2:339178/111‑1 (MQ=255)
                                                          cGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGaa                                                                >  2:619753/1‑139 (MQ=255)
                                                          cGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTATGGTATTTATCCCCATGGCTCCTACGaa                                                                >  2:1050701/1‑139 (MQ=255)
                                                           ggCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAg                                                               <  1:619753/139‑1 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgtg                                                                                            <  1:322178/105‑1 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtgtg                                                                                            >  2:322178/1‑105 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               <  1:126502/102‑1 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               >  2:126502/1‑102 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATg                                                                           <  1:23338/122‑1 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATg                                                                           >  2:23338/1‑122 (MQ=255)
                                                                tgtgAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGaa                                                          >  2:1295020/1‑139 (MQ=255)
                                                                      ggCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAattatt                                                    >  2:765192/1‑139 (MQ=255)
                                                                          aTTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTg                                                >  1:12530/1‑139 (MQ=255)
                                                                             gATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCgg                                             <  1:1075227/139‑1 (MQ=255)
                                                                                    tCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCAt                                                                            >  2:502012/1‑101 (MQ=255)
                                                                                    tCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCAt                                                                            <  1:502012/101‑1 (MQ=255)
                                                                                     cTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 >  2:108756/1‑79 (MQ=255)
                                                                                     cTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTg                                                                                                 <  1:108756/79‑1 (MQ=255)
                                                                                     cTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               >  1:797384/1‑81 (MQ=255)
                                                                                     cTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               <  2:797384/81‑1 (MQ=255)
                                                                                        cTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGAtt                                  >  1:468791/1‑139 (MQ=255)
                                                                                                 gAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGt                         <  1:1295020/139‑1 (MQ=255)
                                                                                                  aaTGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCt                                                                                                           >  2:1069063/1‑56 (MQ=255)
                                                                                                  aaTGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCt                                                                                                           <  1:1069063/56‑1 (MQ=255)
                                                                                                       tGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTgg                                                                                                                        <  2:1276129/39‑1 (MQ=255)
                                                                                                       tGGCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTgg                                                                                                                        >  1:1276129/1‑39 (MQ=255)
                                                                                                         gCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGTAAAATCAACGCTGATGAAAGTGCtgtg                                                                                            <  1:909004/65‑1 (MQ=255)
                                                                                                         gCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGTAAAATCAACGCTGATGAAAGTGCtgtg                                                                                            >  2:909004/1‑65 (MQ=255)
                                                                                                         gCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAg                                                               <  1:696817/93‑1 (MQ=255)
                                                                                                         gCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAg                                                               >  2:696817/1‑93 (MQ=255)
                                                                                                         gCGAAATCGTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCcg                 >  1:1123983/1‑139 (MQ=255)
                                                                                                                 gTCTCACTTTGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTATGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCg         <  1:1050701/139‑1 (MQ=255)
                                                                                                                        tttGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               >  2:1085078/1‑46 (MQ=255)
                                                                                                                        tttGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCt                                                                                               <  1:1085078/46‑1 (MQ=255)
                                                                                                                        tttGTGGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCaa  <  1:1082669/139‑1 (MQ=255)
                                                                                                                          tgtgGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATAcc          >  1:624442/1‑129 (MQ=255)
                                                                                                                          tgtgGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATAcc          <  2:624442/129‑1 (MQ=255)
                                                                                                                            tgGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtg                                                                                              <  1:93806/43‑1 (MQ=255)
                                                                                                                            tgGGGAAAATGAGTCTGGT‑AAATCAACGCTGATGAAAGTGCtg                                                                                              >  2:93806/1‑43 (MQ=255)
                                                                                                                                       |                                                                                                                            
GCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGGGTCTGGT‑AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAA  >  NC_000913/3732184‑3732442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A