Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F1 I1 R1
|
778 |
68.7 |
3228504 |
93.4% |
3015422 |
109.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,511,746 |
(A)8→9 |
coding (599/906 nt) |
yhfZ ← |
putative DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,511,738 | 1 | . | A | 96.8%
| 195.5
/ ‑1.0
| 62 | coding (607/906 nt) | yhfZ | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (32/28); total (34/28) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 |
GCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGGTGTGCGGCCCCAACTCCAGC > NC_000913/3511600‑3511871
|
gcggcgTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGcc < 2:1286273/139‑1 (MQ=255)
cggcgTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a < 2:401977/139‑1 (MQ=255)
gcgTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aa > 1:1288861/1‑139 (MQ=255)
gcgTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aa > 1:1296221/1‑139 (MQ=255)
cgTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aaa > 2:1291525/1‑139 (MQ=255)
cgTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCAAGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aaa > 1:1141537/1‑139 (MQ=255)
tctAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aaaaaaaaca < 1:108984/139‑4 (MQ=255)
tctAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aaaaaaaaca < 2:1157589/139‑4 (MQ=255)
cccAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTAATAAGATAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTc < 1:1291525/139‑1 (MQ=255)
aGCATGGTCATTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACCATCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATg < 2:1296221/139‑1 (MQ=255)
aGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATg < 2:1302161/139‑1 (MQ=255)
ggTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGAtttt > 1:1161380/1‑139 (MQ=255)
gTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aaaaaaaaca < 2:730596/124‑4 (MQ=255)
gTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑a‑‑aaaaaaaaca > 1:730596/1‑121 (MQ=255)
tCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCgg > 2:574384/1‑127 (MQ=255)
tCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCgg < 1:574384/127‑1 (MQ=255)
gTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGAt < 2:1095908/139‑1 (MQ=255)
ttCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑AAGAAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAg > 2:960200/1‑139 (MQ=255)
aTCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg > 1:587689/1‑139 (MQ=255)
aCCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACgcgc > 1:1105177/1‑139 (MQ=255)
ccGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAATAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCt > 1:1353228/1‑139 (MQ=255)
ccGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGACTTTCTGATCCGCCGAACgg < 2:1074077/120‑1 (MQ=255)
ccGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑A‑‑AAAAAAAGCATCGGTCATGATTTTCTGATCCGCCGAACgg > 1:1074077/1‑120 (MQ=255)
cGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCtt > 1:653508/1‑139 (MQ=255)
cATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCa < 2:1141537/139‑1 (MQ=255)
cATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCa < 2:1105177/139‑1 (MQ=255)
cTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACt < 2:386910/139‑1 (MQ=255)
tttAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTc < 2:653508/139‑1 (MQ=255)
aTGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACgg > 1:480946/1‑97 (MQ=255)
aTGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACgg < 2:480946/97‑1 (MQ=255)
tGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTAc > 2:1307037/1‑139 (MQ=255)
gCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTAt < 2:632165/99‑1 (MQ=255)
gCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTAt > 1:632165/1‑99 (MQ=255)
cGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATccgccg < 1:454613/89‑1 (MQ=255)
cGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATccgccg > 2:454613/1‑89 (MQ=255)
tGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTc < 1:167315/67‑1 (MQ=255)
tGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTc > 2:167315/1‑67 (MQ=255)
aaCTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCa > 2:438598/1‑139 (MQ=255)
ctctCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAAc < 2:14238/139‑1 (MQ=255)
tctcGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg < 2:1355782/99‑1 (MQ=255)
tctcGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg > 1:1355782/1‑99 (MQ=255)
tctcGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACt > 2:1247360/1‑139 (MQ=255)
cGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCAAA‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTgg > 1:578071/1‑139 (MQ=255)
cGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTg > 2:400949/1‑109 (MQ=255)
cGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTg < 1:400949/109‑1 (MQ=255)
cGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGt > 2:518974/1‑139 (MQ=255)
gTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTg < 2:1353228/139‑1 (MQ=255)
tGATAAGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGc > 1:1363468/1‑139 (MQ=255)
aaGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGc < 1:1247360/139‑1 (MQ=255)
aaGAGAGATCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGc < 2:587689/139‑1 (MQ=255)
agagaTCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg < 2:1512626/87‑1 (MQ=255)
agagaTCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg > 1:1512626/1‑87 (MQ=255)
aTCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTa > 1:143842/1‑139 (MQ=255)
tCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAg < 2:1363468/139‑1 (MQ=255)
tCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAg > 1:1367328/1‑139 (MQ=255)
tCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAg > 1:1191083/1‑139 (MQ=255)
tCGACTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCACTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAg > 1:853779/1‑139 (MQ=255)
aCTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGgtg > 2:1270772/1‑139 (MQ=255)
cTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg > 1:557855/1‑78 (MQ=255)
cTCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCAcg < 2:557855/78‑1 (MQ=255)
tCGTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCACTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGGtgtg < 2:853779/139‑1 (MQ=255)
gTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATccg < 1:1097506/52‑1 (MQ=255)
gTTCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATccg > 2:1097506/1‑52 (MQ=255)
ttCCACATCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGGTGTGCgg > 1:1028817/1‑139 (MQ=255)
aTCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTa > 1:1322121/1‑124 (MQ=255)
aTCACTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTa < 2:1322121/124‑1 (MQ=255)
cTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAATGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGGTGTGCGGCCCCAACtac > 1:968990/1‑137 (MQ=255)
cTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTc > 2:1181186/1‑70 (MQ=255)
cTACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTc < 1:1181186/70‑1 (MQ=255)
tACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAAc > 1:157829/1‑46 (MQ=255)
tACCGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAAc < 2:157829/46‑1 (MQ=255)
ccGCCA‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGGTGTGCGGCCCCAACTCCAgc > 1:1282311/1‑139 (MQ=255)
|
GCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAAGAGAGATCGACTCGTTCCACATCACTACCGCC‑‑A‑‑AAAAAAA‑CATCGGTCATGATTTTCTGATCCGCCGAACGGTTATCCAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTGCTCGCCAACGTAGGTGTGCGGCCCCAACTCCAGC > NC_000913/3511600‑3511871
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
