Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F9 I0 R1
|
113 |
83.2 |
1840812 |
91.6% |
1686183 |
224.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,184,542 |
C→A |
100% |
P1100Q (CCG→CAG) |
rpoB → |
RNA polymerase, beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,184,542 | 0 | C | A | 100.0%
| 355.4
/ ‑6.7
| 105 | P1100Q (CCG→CAG) | rpoB | RNA polymerase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base A (57/45); total (58/47) |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 105 total aligned reads displayed.
ACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAA > NC_000913/4184309‑4184776
|
acccGAGTTCGAAAAGAAACTCGAAGGGAAACGCCGCAAAATCCCCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTgg < 1:487447/236‑1 (MQ=255)
gggTTCGAGAAGAAACTCGAAGGGAAACGCCTCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGt < 1:306883/237‑1 (MQ=255)
gattCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTa < 1:875181/237‑1 (MQ=255)
gaagaaACTCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGAGCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATAGCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTAACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGACCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGtct < 2:348914/238‑1 (MQ=255)
accTCGAAGCGAAACCTCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGAGCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTAt < 2:107497/236‑1 (MQ=255)
aaCCCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGATCTGGCCCCGGGCGTGTTGAAGATTTTTAAGGTATATCTGTCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTa < 2:784113/237‑1 (MQ=255)
cGAAGCCAAACGCTGGAAAATCGCCCTGGGCGACGATCTGGAGCCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGACTGGTGACAAGGTGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACa < 1:735366/239‑1 (MQ=255)
gAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAGGATATGCCTTACGATGAAAACGGTACGCCGTTAGACATCGAACTGAACCAGCTGGGCGTACCGTCTCGGATGAACa > 1:551728/1‑238 (MQ=255)
attcccccAGGGCGGCGATCTGACACCGGGCGTGCTGAAGATTTTTAAAGTATACCTGGCGGTGAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGaaa < 2:134651/234‑1 (MQ=255)
aaTCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCGGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGaaa < 1:759405/239‑1 (MQ=255)
aCCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGAATTGAACCAGCTGGGCGTACCGTCTCGTCTGAACATCGGTCAGATCACCGAAA‑ccc > 1:397440/1‑238 (MQ=255)
cccAGGGGTGCGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCAc < 2:224006/239‑1 (MQ=255)
cccAGGGGGACGATCTGGCACCGGGTGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGGATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCAc < 1:793902/239‑1 (MQ=255)
cccAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGCTGAAAACGGTCCGCCGGTAGAAATCGGACTGAACCAGCGGGGCGTCCCGGCTCGTATGAACATCGGCCAGACCCTCGACA‑CCCa > 1:558024/1‑238 (MQ=255)
cAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCt < 1:14211/239‑1 (MQ=255)
ggCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGGCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTggg > 1:224006/1‑239 (MQ=255)
ggCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGGGACAAGATGGCAGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACACGATCGCAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTCCCGCCTCCTAGGAACATCGGCCAAACCCCCGAAA‑CCCACCTggg > 2:559196/1‑239 (MQ=255)
tGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTAGCCCGGTAGCCATCGTACTGAACCAACTGGGCGGATCGTCCCGGATGAAAATCGGCCAAATCCCCGAAA‑CCCACCTGGGTATGGcggga > 2:195269/1‑235 (MQ=255)
gCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGCATGGCTGCGaa > 1:158646/1‑239 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTCGACATCGTACTGAACCAGCTTGGCGTACCGTCTCGGATGAACATCGGGCAGATCCTCTGAG‑CCCCCCTGGGGATGGCTCCgcagaggat > 1:685812/1‑231 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAGCCAGCTGGGCGTACCGTCTCCTATGAACAACGGTCAGATCCCCGAAA‑CCCACCTGGGGAAGGccggacaagggaa > 2:158958/1‑227 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTa > 1:168484/1‑238 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTAt > 1:575369/1‑239 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGAt > 1:4325/1‑239 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTCCGAAAggaaa > 1:194164/1‑236 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGGCAGATCCTCGAAA‑CCCACCTGGGGATGGCTGCGAAAggga > 1:317676/1‑236 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGCCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTa > 1:775615/1‑238 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACAAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCCCGAAA‑CCCACCTGGGTATGGCTGGGCAAggga > 1:732648/1‑236 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGCGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTCCGATGAAAACGGTACGCCGGTAGACATCGACCTGAACCAGCTGGGCGCACCGTCCCCTAGGACCATCGGTCAAATCCCCCAAA‑CCCACCCGGGTCTGGACGCGAAAGGTAt > 2:655004/1‑239 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGATCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCTAATGAACATCGGTCAGATACCCCAAA‑CCCACCTGGGGAAGGTTGGGGAAggaaa > 2:369727/1‑236 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGAAAAGATGGCCGGTCGTCACGGTAACACGGGGGGAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGCAGACATCGCACGGAACCAGCTGGGGATACCGCCTCGTATGAAAACCGGTCAAACCCCCCAAC‑ACCCCCCGGGTTTGGCTCCGaaacagga > 2:786999/1‑234 (MQ=255)
gTGCTGAAGATTGGTAAGGTAAATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCg < 1:358736/238‑1 (MQ=255)
tGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGc > 1:617982/1‑239 (MQ=255)
tGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTATCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGAc < 1:195269/239‑1 (MQ=255)
tatCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCAt > 1:162700/1‑236 (MQ=255)
tCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAAAATCGGGCAGATCCTCGAAA‑CCCCCCTGGGGATGGCTGCGAAAGGAATCGGGGCAAAAAACAACGCCAAGCTGa > 2:524657/1‑239 (MQ=255)
cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGAATCGGCGACAAGATCAACGCCATGCTGAAAca > 1:203166/1‑238 (MQ=255)
cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCAAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCCGATCCTCGAAA‑CCCACCTGGGTATGGCTGGGAAAGGTATAGGCGACAAGAGCCACGCCATGCTGAAAaag > 2:172036/1‑239 (MQ=255)
ggTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCCTGCTGCAAcaca > 1:170715/1‑237 (MQ=255)
ggTTAAACGCCGTATCCAGCCTGATGACAAGATGGCAGGTCGTCACGGTAACACGGGTGTAATTTCTAAGATCAACCCGCTCGAAGAGATGCCTTACGATGAAAAAGGTACGCCGGTAGACATCGGACTGAAACAGCTGAGCGAAACGTCTCGTATGGACATCGGTCAGATCATCGAAA‑GCCACCCGGGCCTGGCGCCGAAAGGTATCAGCAACAAGAtaccaccaacacggaaaacac > 2:21284/1‑219 (MQ=255)
ggTTAAACGCCGTACCCGGCCTGGTGAAAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcag < 2:701480/238‑1 (MQ=255)
gCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGa > 1:878547/1‑152 (MQ=255)
gCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGa < 2:878547/152‑1 (MQ=255)
ccTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGCAA‑CCCCCCTGGGAATGCATGGGAAAGGGAGCGCCGACAAGAACAACGCCCAGCTGAAACAACAGAAAAAAGACGGGaaaat > 2:792559/1‑237 (MQ=255)
gggtaCAAGGTGGCAAGTCTACACGGTAACCAGGGTGTAATTTCTAAGATCAACCCGAACGAAGATATGCCTGACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACAGCGGTCAGATCCGCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcg < 1:238577/235‑1 (MQ=255)
ggTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAACAGGATCGGCGGCAAGATCAACGCCCTGCGTAAACAGCAGCAAGAAGTGCCGAAAcgcg > 1:439445/1‑235 (MQ=255)
tGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGAATCGGCGGCAAGGTCAACGCCATCCTGAAACAGCAGCAAGAAGTCCGGAAACTgccgg > 1:19095/1‑236 (MQ=255)
gACAAGATTGCAGGTCGTCCCGGTAACAAGGGTGGAATTTCTAAGATCAACCCTATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGcgcg < 1:463490/238‑1 (MQ=255)
aaaaGAGGGCAGGTCGTCACGGTAACAAGGGTTTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGaa < 2:600006/237‑1 (MQ=255)
ggCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGaaa > 1:556853/1‑146 (MQ=255)
ggCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGaaa < 2:556853/146‑1 (MQ=255)
ggCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCCCGAAACTGCGCGAATTCATcc > 1:657449/1‑239 (MQ=255)
gtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCCCGTATGACAACCGGTCAGATCCGCGAAA‑CCCACCTGGGTACGGCTCCGGAAGGGATCGGCGACAAGCTCAACACCAAGCTGAACCAGCAGCCAGCAGTCGCGAAACTGGCCAAATTAAACCAgaggcag > 2:5936/1‑233 (MQ=255)
gttaCAAGGGTTGAATTTTTAAGATCAACCCGGTCGAAGATATGGCTTACGGTGAAAACGGTACGCCGGTAGACATCGGACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAt < 2:194164/236‑1 (MQ=255)
tAACAAGGGTTTAATTTCTAAGGTCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAt < 1:369727/238‑1 (MQ=255)
tAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACACCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGCGCCAAAGTCAACGCCATGCTCAACAAGCACCAAGAAGGCGCGAAACTGCCCCAATTAATCC‑CCGTGCGGTACGAT‑c > 2:822264/1‑239 (MQ=255)
aaaaaGGGGTTAATTTTCAAGGCCAAACCGAACGAAAAAATGCCTTACGATGAAAACGGTACGGCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGGATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑Ct < 2:792932/236‑1 (MQ=255)
gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAATCGCGAAACTGCCCGAATTCATCCAGCGTGC‑GTACGAC‑CTGGGCGCTg > 1:19390/1‑238 (MQ=255)
gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGCATTGGCGACCAAAGCAACGCCATGCTGAAACACCAACAAAAAGTCCCGAAAATGCGCGACTTCATCCAccgggc‑gacaggactaggcccgga > 2:579051/1‑222 (MQ=255)
tttCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGCCAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGt > 1:905607/1‑238 (MQ=255)
cTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACCAGATCAACCCCATGCTGAAACAGCAGCAAGAAGTCCCGAACCTGCGGGAATTCATCCACCGGGC‑GTACGCA‑CTGGGCGCTGACGTTCGt > 2:1287/1‑239 (MQ=255)
tAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCa < 1:196703/161‑1 (MQ=255)
tAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTCCGAT‑CTGGGGGCAGACGTCCgcc > 1:694675/1‑237 (MQ=255)
tAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATAAACGCCa > 2:196703/1‑161 (MQ=255)
aaCCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGGTCAACGCCATGCTGAAACAGCAGCAAGAAGCCCCGGAACTGGCGGAATTCATCCACCGTGG‑CGACGAA‑CTGGGGGCGGCAGTTCGTCGAA‑AAGt > 2:611684/1‑239 (MQ=255)
ccccccgtgAAAATATGCCTTACGATGAAACCGGTACGCCGGTAGGCATCGTACTGAACCAGCTGGGCGTACCGTCGCGTATGAACATCGGTAAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGtt < 2:483761/231‑1 (MQ=255)
aCCCGATCGAAGAAATGCCTTACGATGAAAACGGGACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGGAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGtt < 1:786999/239‑1 (MQ=255)
cccGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTg < 1:1287/239‑1 (MQ=255)
cccatgcaaGATATGCCTTTCGATGAAAACGGGTCGCCGGTAGGCATCGGACTGAACCAGCTGGGGGGACCGTCTCGTATGAACAACGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGa < 2:657242/232‑1 (MQ=255)
gATCCAAAATATGCCTTAGGATGAAAACGGTACGCCGGTAGACAGCGTACTGAACCAGCTGGGCGTACCGGCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGAcc < 2:657449/239‑1 (MQ=255)
aaTCGAAAATTGGCTTTACGATGAAAACGGTACGCCGGTAGACAACGGACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATTGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGAcc < 2:203166/238‑1 (MQ=255)
tCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAC‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGAccgg > 1:642853/1‑237 (MQ=255)
tCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCAGGCTGAAACAGCAGCAAGAAGTCGCAAAACTGCGGGAATTCACCCAGCGGGC‑G‑ACCATCCTGGCGGCGGACCGTCGCCAAA‑AAGTTGACCTg > 2:423870/1‑239 (MQ=255)
tCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCAAGCTGAAACCGCAGCAAGAAGTCCCGAAACTTCGCGCATTCACCCCGCCGCC‑GTACAAC‑CTGGGGGCTGCCGTCCggccaaaaaatgaactg > 2:287172/1‑223 (MQ=255)
tCGAAGATAGGCCTTAGGGTGAAACCGGTACGCCGGTAGACATCGTACGGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTg < 1:172036/239‑1 (MQ=255)
gCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGACTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTCAGTACCtt > 1:402700/1‑238 (MQ=255)
gCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACCAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCACCGTGC‑GTCCGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTTACCTGAGTACCTTc > 1:869523/1‑238 (MQ=255)
ttccGATGAAAACGGTTCGCCGGTAGGCATCGTACAGAACCAACTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCg < 1:822264/236‑1 (MQ=255)
tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGa > 1:202459/1‑214 (MQ=255)
tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGa < 2:202459/214‑1 (MQ=255)
tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGa < 1:287172/239‑1 (MQ=255)
tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGa > 1:54347/1‑239 (MQ=255)
cGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATg < 1:684899/239‑1 (MQ=255)
cGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATg < 2:168484/239‑1 (MQ=255)
ataaaaGGGTACGCCGTTCAACTCCGTACTGAACCAGCTGGGGGTACTGTCGCGTTAGAACACCGGTCAGATCCTCGAAA‑ACCACCTGGGTATGGCGTCGAAAGGTAACGGCGACAAGATCAACGCCATGGTGAAACAGCAGCAAGAAGTCGCGAAACATCGCGAATTCATCCAGCGTGC‑GTACGGT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATgaag < 2:486375/237‑1 (MQ=255)
aaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCCCGAATTCATCCCTCGGGC‑GTACGAC‑CTGGGGGCTGGCGTTCGT‑AGACAAATTGACCGCAGAACCTTCAGCGATGaagaag > 2:861394/1‑239 (MQ=255)
tACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTAACTTCAGCGATGaagaaggtttgg > 1:435263/1‑233 (MQ=255)
aCGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCCGAAACAGCCGCAAGAAGTCGCGAAACTGCGCGAATTCCTCCACTGTGC‑GCACGAT‑CTGGGCGCTGACGTTCTACACA‑AAGTTGACCCGAGTACCCTccgtgggaaaaaagtaatagg > 2:272629/1‑219 (MQ=255)
aCGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGAATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTCCGCGAATTCATCCAGCGTGC‑GTACGAC‑CTGGGCGCGGACGTTCGTCGGA‑AAGTTGACCTGGGTCCCTTCAGGGAGGAAAAAGTTATggg > 2:887758/1‑237 (MQ=255)
cgtgtgagttCGTACTGGACCCGCTGGGGGTAGCGGCTCGGATGAACAGAGGTCAGACCCTCGAAA‑CCCACGTGGGTATGGGTGCGAAAGGTGTCGGCGACAAGATCAACGCCATGCGGAAACAGGAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAG‑CTGGGCACTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCt < 2:10179/229‑1 (MQ=255)
caacGTACTGAACCAGCTGGGCGTACCGGCTCGGATGAACATCGGTCAGATCATCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGaaa < 1:861394/236‑1 (MQ=255)
tCGTACTGAACCAGGTGGGCGTGCCGTCTCGTTTGAACACTGGTCAGGTCCCCGAAA‑CCCACCTGGGTAGGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAc < 2:317676/239‑1 (MQ=255)
tCGTACTGAACCAACTGGGCGGACCGTCTCGTATGAACATCTGTCAGATCCTCGAAA‑CCCACCGGGGTAGGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAc < 1:465055/239‑1 (MQ=255)
tCGTAATGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAc < 1:655004/239‑1 (MQ=255)
tCGGACTGAACCAGCTGGGCGTACCGTCTCGTAAGGACATCGGTAAGCTCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCCACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAc < 1:408933/239‑1 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGCAA‑CCCACCTGGGTATGGCTGCGAAAGTTATCGGCGACAAGCTCAACGCCATGCTGAAACAGCAGCAAGCAGTCGCGCACCTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCTGCAGA‑AAGGTGACCGAAGAACCCTCCGCCAGGGCAAAGTTATGCGTCAGGACGaaaaaa > 2:642060/1‑237 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGGGTACCTTAAGCGATGAAGAAGTTATGCGTTTGGCTGaaaa > 1:269161/1‑237 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGGACCTTCAGCGGTGAAAAAGTTATGCGTCTGGCTGcaaa > 1:366133/1‑237 (MQ=255)
tACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATCGGTCTGGCTGAAAACCt > 1:883990/1‑238 (MQ=255)
aaCCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTTTGCGTCTGGCTGAAAACCTGCGCaa > 1:544143/1‑239 (MQ=255)
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ACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAA‑CCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGC‑GTACGAT‑CTGGGCGCTGACGTTCGTCAGA‑AAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAA > NC_000913/4184309‑4184776
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
