Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F86 I0 R1
|
593 |
297.4 |
9515568 |
94.4% |
8982696 |
150.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCT > CP009273/450141‑450438
|
GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAG > SRR19973082.3905050/1‑150 (MQ=60)
GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAG > SRR19973082.2074070/1‑150 (MQ=60)
ATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTT < SRR19973082.2996823/150‑1 (MQ=60)
ATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTT < SRR19973082.2997411/150‑1 (MQ=60)
CGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTAT < SRR19973082.4354198/150‑1 (MQ=60)
GCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATG > SRR19973082.3230682/1‑150 (MQ=60)
CTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGA < SRR19973082.3382527/150‑1 (MQ=60)
GCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAA < SRR19973082.3088394/150‑1 (MQ=60)
CTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAA > SRR19973082.4627080/1‑150 (MQ=60)
TCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAAC > SRR19973082.3256084/1‑150 (MQ=60)
CTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACG > SRR19973082.887971/1‑150 (MQ=60)
CATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCC > SRR19973082.744198/1‑150 (MQ=60)
ATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCT < SRR19973082.4156315/150‑1 (MQ=60)
CACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCC > SRR19973082.2656595/1‑150 (MQ=60)
ACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCG > SRR19973082.754852/1‑150 (MQ=60)
ACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCG > SRR19973082.2117359/1‑150 (MQ=60)
ttttttggtGTGGGATGGGTTGCAGGACACCGTCTTTGCCTCGCCTCCCTGTCGTGGAGCAGGAAGCATCGCTTAAAAACGCTTTTGCAACTGTCGGCGCTTTTCCTGTTTGTTGCTAAAAATTTTATGAAACACGGCCTGCGGGCCGT‑T < SRR19973082.870163/141‑1 (MQ=60)
TTAGGAGTGGGAAGGGTTGCTGGACACCGTATTTGCCTCTCCTCCCTGTCTTGGTGCTGGATGCATGGCTTAAAAACGCATTTGAACCTGTCGGGGATTTTCCCTTTTGTTGCTAAATTTTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG < SRR19973082.4408185/150‑1 (MQ=58)
TAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG > SRR19973082.3931881/1‑150 (MQ=60)
TGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATTTTGCTAAAAATTTGATGAAAAACGGCCAGCGGGCCGgtggggtttttt > SRR19973082.871928/1‑138 (MQ=60)
TGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGGATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGGTTTTTG > SRR19973082.871682/1‑150 (MQ=60)
GGATGGGTTGCCGGACCCCGTCGTTGCCTCTCCTCCCTGTCGTGGAGCAGGATGCTTCGCTTAAAAACGAATTTGATACTGTGGGGGTTTTTCCATTTTGTGTCTAAAATTTTTATTAAACACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTG < SRR19973082.4040599/150‑1 (MQ=32)
GGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTG < SRR19973082.4414596/150‑1 (MQ=60)
GATGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCTTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAATTTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGG < SRR19973082.890924/150‑1 (MQ=60)
GACGGGTTGCAGCACACCGTCTTTGCCTCTCCTCCCTGTCGGGGAGCAGGAAGCATCGCTTAAAAACGCATTTGAAACTGTCGGCGCTTTTCCAGTATGTTGATAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGG < SRR19973082.943483/150‑1 (MQ=60)
AAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGA < SRR19973082.3161959/150‑1 (MQ=60)
AAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGA < SRR19973082.3162548/150‑1 (MQ=60)
GGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGGGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG‑‑TTTTGTGTGGGTT > SRR19973082.2103829/1‑150 (MQ=60)
GGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGggtttgtttttttttttt > SRR19973082.2102833/1‑132 (MQ=60)
GGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTTG‑‑TTTTtgtgggtt > SRR19973082.2102681/1‑142 (MQ=60)
TGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGC < SRR19973082.4702121/150‑1 (MQ=60)
TGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGC < SRR19973082.4704139/150‑1 (MQ=60)
TGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGC < SRR19973082.625444/150‑1 (MQ=60)
TGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGC < SRR19973082.627019/150‑1 (MQ=60)
CAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGgttttttttttatggatttttggc > SRR19973082.3101146/1‑126 (MQ=60)
CAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GGTG‑‑TTTTTTGTGGATGTTGCGC > SRR19973082.3101148/1‑150 (MQ=60)
GGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTTTGTGGATTTTGCGCTT > SRR19973082.3529043/1‑150 (MQ=60)
GACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGG‑GTTG‑‑TTTTTTCTGGTTTTTTCGCTTT > SRR19973082.3888059/1‑150 (MQ=60)
ACACCGTCTTTGCCTCTCCTCCCGGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCACCTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTT < SRR19973082.3311936/150‑1 (MQ=60)
TGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCAT < SRR19973082.730910/150‑1 (MQ=60)
CCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTC < SRR19973082.888666/150‑1 (MQ=60)
TCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAG < SRR19973082.4197540/150‑1 (MQ=60)
CCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG‑‑TTTTttgtggttttttgggttttttgccccccatcaaacgaaaa > SRR19973082.153326/1‑110 (MQ=60)
CTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACGGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAAT < SRR19973082.4176440/150‑1 (MQ=60)
GGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTG < SRR19973082.1742542/150‑1 (MQ=60)
GGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTG < SRR19973082.4152426/150‑1 (MQ=60)
GAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGATAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGT < SRR19973082.582520/150‑1 (MQ=60)
AAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTggtgtttttttttggttttttggtgtttttgcaacaataaaaaacaaaattgacgcggcatttg > SRR19973082.1215944/1‑86 (MQ=60)
AAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTG < SRR19973082.2625600/150‑1 (MQ=60)
AGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAATATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTT‑‑TTTTTTTTGGATTTTtagattttttaacagaaataaaacgaaaaattcccgggaaatgttt > SRR19973082.1571567/1‑104 (MQ=60)
GCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTttttgggtttttgggttttttgccagcaataagaaaaaaatatgcccgggctattgaa > SRR19973082.684134/1‑92 (MQ=60)
GCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG‑‑TTTTttgtgggttttgggcttttttgcccgcaatcaaacgaaaaatgcccgggcaatttgaa > SRR19973082.685261/1‑92 (MQ=60)
CATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAA < SRR19973082.3017831/150‑1 (MQ=60)
CATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAA < SRR19973082.3017893/150‑1 (MQ=60)
CATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAA < SRR19973082.3017928/150‑1 (MQ=60)
GCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAAT < SRR19973082.1062688/150‑1 (MQ=60)
CGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATA < SRR19973082.2099558/150‑1 (MQ=60)
CGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATA < SRR19973082.2390642/150‑1 (MQ=60)
CGTAAAAACGATTTTGCAACTGTCGGCGATTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATA < SRR19973082.1683008/150‑1 (MQ=60)
GTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTgtggttttttgtggggttttgggttttttggccccaataataaggaaaattggcggggctagtgtagaaaaaa > SRR19973082.4216091/1‑77 (MQ=60)
GTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG‑‑TTTTttgtgggtttttggggtttttaccacccataagacgaaaatttcccggggcttttttaaaaaaaa > SRR19973082.1477221/1‑85 (MQ=60)
TAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTgttttttttttttgttttttgggttttttgccaccaataagtagaaaaaatgcccgggcttgtttaaaaaaaaa > SRR19973082.240320/1‑76 (MQ=60)
AAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGggttggtttgtgttggtttttggggtttttgcccgccataagacccaaaattggcgggggatttgtaaaaaataga > SRR19973082.3686421/1‑74 (MQ=60)
AAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGggtgtttttttgttggttttttggtttttttacaccctagaaaagaaaaaattgccgggaagttttaaaaaaaaac > SRR19973082.1280104/1‑74 (MQ=60)
AAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGC < SRR19973082.3270025/150‑1 (MQ=60)
AAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TGTG‑‑TTTTTTGTGGGTTTTGGGGTTTTTGGCCACCATTCAGACGAAAAattcccggggattttgtaaaaataaacg > SRR19973082.2186627/1‑122 (MQ=60)
CAACTGTCGGCGCTTTTCCAGTTTGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAAT < SRR19973082.3974532/150‑1 (MQ=60)
TGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAAAGGCCGGCGGGCCGT‑TTTG‑‑TTTTttgttggtgtttgggattttttacccccataaaaaaaaaaaatcaccgggcaagtttaaaaaaaaaacacaagtcgccaaaaaa > SRR19973082.4556831/1‑66 (MQ=60)
CGGCGCTTTTCCAGTATGTTGATAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTT < SRR19973082.4587048/150‑1 (MQ=60)
CTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTggtttttttttttggtttttgggtttttttacaccaaaaaaaccaaaaaataaccggcaatgtttaaaaaaaaacgacaaccccccaaaaaccagcaaca > SRR19973082.2404101/1‑50 (MQ=60)
TCCATTATTTTGATAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCA < SRR19973082.2923838/150‑1 (MQ=60)
CCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTgttgtgttttgtgggttttgggctttttgaccaaccataccaagcaaaaatccccgggcaattgtaaaaaaaacccacccccccccaaaacccaaacacacacaa > SRR19973082.649799/1‑45 (MQ=60)
CAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG‑‑TTTTttgtgggtttttggcttttttcccagcaataagaacaaaaaatccccggcaatgttaaaaaataaccgacaccccgcaaaaaaccataacgactcaaa > SRR19973082.2683868/1‑52 (MQ=60)
CAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG‑‑TTTTttatggtattttcgcttttttcccaccaaacaaaacaaaaattccccggaaatttgaaaaaaaaaacgacaccgcgccaaaacccatctcgaaaacta > SRR19973082.2683830/1‑52 (MQ=60)
TTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAA < SRR19973082.2220402/150‑1 (MQ=60)
TATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAA < SRR19973082.4344074/150‑1 (MQ=60)
TTGCTAAAAATTTTATTAAAAACGGCCTGCGGGCCGT‑TTTT‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGA < SRR19973082.1722725/150‑1 (MQ=60)
CTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTgtttttttttgtggattttttggttttttgccacccctaagaacacaaaatgccgggcattgtgaaaaaataaaccccaccgcgccaaaaaccgtatagacaccaaaaaatgattc > SRR19973082.1445522/1‑34 (MQ=60)
AAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCT < SRR19973082.3520042/150‑1 (MQ=60)
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GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTG‑‑TTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCT > CP009273/450141‑450438
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
