Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F98 I0 R1
|
799 |
294.1 |
9752082 |
92.2% |
8991419 |
150.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTA > CP009273/450141‑450439
|
GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAA > SRR19973081.3848878/1‑150 (MQ=60)
TTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGA > SRR19973081.4018172/1‑150 (MQ=60)
TCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAAT < SRR19973081.1986459/150‑1 (MQ=60)
CATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATT < SRR19973081.1388342/150‑1 (MQ=60)
CATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATT < SRR19973081.1384868/150‑1 (MQ=60)
CTCTGGCTCTGCATACTTACAATATTAAGGAGTGGGTAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGTAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTAT < SRR19973081.4593669/150‑1 (MQ=60)
CGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTAT < SRR19973081.757750/150‑1 (MQ=60)
CGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTAT < SRR19973081.757638/150‑1 (MQ=60)
TCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAAC < SRR19973081.271294/150‑1 (MQ=60)
TCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAAC > SRR19973081.4331856/1‑150 (MQ=60)
TCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAAC < SRR19973081.4544663/150‑1 (MQ=60)
TCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAAC < SRR19973081.2761511/150‑1 (MQ=60)
TCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAAC > SRR19973081.1089310/1‑150 (MQ=60)
TGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTACAGTATGTTGCTAAAAAATTTATGAAAAAAGG > SRR19973081.1243741/1‑150 (MQ=60)
CATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTATGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCC > SRR19973081.673559/1‑150 (MQ=60)
ACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGC > SRR19973081.1316018/1‑150 (MQ=60)
CTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCG < SRR19973081.4783382/150‑1 (MQ=60)
ACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCG > SRR19973081.1890259/1‑150 (MQ=60)
TATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑G > SRR19973081.1807579/1‑150 (MQ=60)
TATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑G > SRR19973081.3945902/1‑150 (MQ=60)
TTATGGAGTGGGACGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTT < SRR19973081.4525981/150‑1 (MQ=60)
TAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTggtg > SRR19973081.4117719/1‑146 (MQ=60)
TAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTG > SRR19973081.3331748/1‑150 (MQ=60)
AGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTT > SRR19973081.1577955/1‑150 (MQ=60)
GGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTTTTT > SRR19973081.4857987/1‑150 (MQ=60)
GAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTT < SRR19973081.2692725/150‑1 (MQ=60)
AGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTggtgttttt > SRR19973081.890330/1‑141 (MQ=60)
AGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTTTTTTT > SRR19973081.3017087/1‑150 (MQ=60)
AGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTG < SRR19973081.3666270/150‑1 (MQ=60)
AGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTG < SRR19973081.3665285/150‑1 (MQ=60)
AGTGGGAAGGGTTGCAGGACACCGTCTATGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATATGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAATCGGCCTGCGGGCCGT‑GTAGTTTTG > SRR19973081.3017050/1‑150 (MQ=60)
TGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTGTC > SRR19973081.2805950/1‑150 (MQ=60)
TGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGgggtgttttggg > SRR19973081.184429/1‑138 (MQ=60)
TGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTttg > SRR19973081.1838929/1‑147 (MQ=60)
TGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GGTGTTTTGTG > SRR19973081.1839058/1‑150 (MQ=60)
GGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTgttgtgttgtgg > SRR19973081.2209334/1‑138 (MQ=60)
GGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTG < SRR19973081.2431593/150‑1 (MQ=60)
ACGGGTTGCAGGACACCGTCTTTGCCCCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGA < SRR19973081.1897344/150‑1 (MQ=60)
AAGGTTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCTTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCATTATGTTGCTAAAGATTTTTTGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGA < SRR19973081.1896497/150‑1 (MQ=60)
TGGGTTGCTGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCTTTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGAT < SRR19973081.1238611/150‑1 (MQ=60)
AGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCTTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATTAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGAT < SRR19973081.1237870/150‑1 (MQ=60)
GGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGgtttggtttttgtggttt > SRR19973081.3511582/1‑132 (MQ=60)
GGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTT < SRR19973081.1371535/150‑1 (MQ=60)
GTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTT < SRR19973081.3122190/150‑1 (MQ=60)
GTTGCAGGACACCGTCTTTGCCACTCCTCCCTGGCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGAACCTGTCGGCGCTTTTCCTGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTT < SRR19973081.3291868/150‑1 (MQ=60)
GGTGCAGGACACCGTATTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGAAACTGTCGGCGCTTTTCCAGTATTTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTT < SRR19973081.4101581/150‑1 (MQ=60)
GGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGGATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTttgtggtgtttttgcgt > SRR19973081.2993374/1‑133 (MQ=60)
GACACCGTCTTTGCCTCTCCTCCCTGTCGTGTAGCAGTAAGCATCGCTTAAAAACGCATTTGAAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTT < SRR19973081.3374329/150‑1 (MQ=60)
GACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTT < SRR19973081.2204917/150‑1 (MQ=60)
GACACCGTCTTTGCCTCTCCTCCCGGTCGTGGAGCCGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTT < SRR19973081.2204941/150‑1 (MQ=60)
CACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCTTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTT < SRR19973081.107710/150‑1 (MQ=60)
CACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTT < SRR19973081.107703/150‑1 (MQ=60)
ACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTG < SRR19973081.2632388/150‑1 (MQ=60)
GTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTGTGTGGTTTTTGGGGTTTTTGGCC > SRR19973081.3655229/1‑150 (MQ=60)
GTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTGTgtggggttttggcgtttttgcc > SRR19973081.2281429/1‑128 (MQ=60)
GTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTGTggggctgttgcggtttttggcc > SRR19973081.2281448/1‑128 (MQ=60)
CTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCA < SRR19973081.4904860/150‑1 (MQ=60)
TCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTTTCTTGATTTTGGGCTTTTTGCCCAGCcatcacaccaa > SRR19973081.1542842/1‑139 (MQ=60)
GAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGG < SRR19973081.3591794/150‑1 (MQ=60)
GCAGGAAGCATCGCTTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCTGTTTGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAA < SRR19973081.953569/150‑1 (MQ=60)
GCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAATATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAA < SRR19973081.3935083/150‑1 (MQ=60)
GCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAA < SRR19973081.1461849/150‑1 (MQ=60)
CAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAATCGGCCTGCGGGCCGT‑TTTGTTTTGTgtggggttttggggtttttggcccgagtgaggcggcaatttcgcgggggt > SRR19973081.2114700/1‑100 (MQ=60)
CAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTttgtgggttttttggtttttttggcgcaatgagtaccaaaattggcggggcg > SRR19973081.2115838/1‑98 (MQ=60)
CAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTttgtggcttttgggcgtttttgccccccataaaaccaaaaaatccccggcaa > SRR19973081.3075112/1‑98 (MQ=60)
AGTAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATT < SRR19973081.2597406/150‑1 (MQ=60)
AGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGgggggttttttttgggtttttggcgtttttggcacccataagacggaaaattggccgggctt > SRR19973081.978959/1‑88 (MQ=60)
GAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGT < SRR19973081.4301706/150‑1 (MQ=60)
GAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGT < SRR19973081.2315720/150‑1 (MQ=60)
AAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTG < SRR19973081.4051158/150‑1 (MQ=60)
CATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTttgttgttttttggcgtttttgcccgccataagacgaaaaattcgcgggcaatgtgtaa > SRR19973081.2651902/1‑91 (MQ=60)
ATCGCGTAAAAACGCTTTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAA < SRR19973081.4663301/150‑1 (MQ=60)
ATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAA < SRR19973081.4663316/150‑1 (MQ=60)
GTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATAC < SRR19973081.1509456/150‑1 (MQ=60)
GTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATAC < SRR19973081.1509418/150‑1 (MQ=60)
TAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACG < SRR19973081.151393/150‑1 (MQ=60)
TAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACG < SRR19973081.1371433/150‑1 (MQ=60)
AAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTggtggtttttgtggtttttgggggtttttgcccgcaatcagaccaaaaatgcccgggacatgtgaaaaaataaacg > SRR19973081.709578/1‑74 (MQ=60)
CATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTGTCTGGATTTTTGGCGTTTTTCCCAGCATTAATACGAAAATTTCCCGGGGATTGTGTAAAAAAAATCGACAGCG > SRR19973081.1948243/1‑150 (MQ=60)
CAACTGTCGGCGCTTTTCCCGTTTGTTGCTAAAATTTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTGGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAAT < SRR19973081.1351456/150‑1 (MQ=60)
CAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTTTATGGATTTTTAGCTTTTTGCCCACCAATCAGACCAAAAATTCCCCGGCATTGTGAAAAAATAAGCCACAACGCGCAAA > SRR19973081.1192502/1‑150 (MQ=60)
CAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑GTTGTTTTtttttggtttttggcttttttgccagcaataataagaaaatttggccgggattgtttaaaaataagcgacagcgcgcaaa > SRR19973081.1192071/1‑70 (MQ=60)
AACTGTCGGCGCTTTTCCAGTATGTTTCTAAAGATTTTATTAAAAACGGCCTGCGGGCCGTggtgttttttttttgtttttggggttttttacaccaaaaaacacaaaaaatccccggcaatgtttaaaaaaaaaaacaaaaccgcaaaa > SRR19973081.3704331/1‑61 (MQ=60)
AACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATTAAAAACGGCCTGCGGGCCGggtttttttttttgggttttgtgggttttttccaaccaataaaacaaaaaatgcccgggaattttgtaaaaaaaaaaacacccccccaaa > SRR19973081.1258799/1‑60 (MQ=60)
AACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGgcgtgtttttttttgtgttttttttgggttttttggcgccatgaatagaaaaaatgacggggttttttgtaaaaaaaaacaacaaggcccaaa > SRR19973081.1257512/1‑57 (MQ=60)
AACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGgggtgtttttttttttttttttggtttttttgacaccaaaaaaaaaaaaaatgaccggccttttttaaaaaaaaaagaaccgccccccaa > SRR19973081.1257482/1‑60 (MQ=60)
TGTCGGCGCTTTTCATTTATGTTGATAAATTTTTTATGAAAAACGGCCTGCGGGCCTT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGAATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACC < SRR19973081.4264566/150‑1 (MQ=60)
TGGGCGCTTTTCCTGTTTGTTGCTAAATTTTTTATCAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGT < SRR19973081.581727/150‑1 (MQ=60)
TCGGCGTTTTTCCTGTTTGTTGATAATGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGT < SRR19973081.3026078/150‑1 (MQ=60)
GGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTC < SRR19973081.4033391/150‑1 (MQ=60)
GGCGCTTTTCCAGTATGTTGATAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTC < SRR19973081.4033383/150‑1 (MQ=60)
GCGCTTTTCCTGTATGTTGCTAAAGTTTTTATTAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCT < SRR19973081.2751965/150‑1 (MQ=60)
GCGCTTTTCCTGTATGTTGATAAATTTTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCT < SRR19973081.4225377/150‑1 (MQ=60)
cgatttacaattattttcaTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTC < SRR19973081.3931700/131‑1 (MQ=60)
CGCTTTTCCAGTATGTTGCTAAATATTTTATGAAAAACGGCCTGCGGGCCTT‑TTTTTTTTGTCTGGATTTTGCGATTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTC < SRR19973081.3931692/150‑1 (MQ=60)
CGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTGTGGATTTTtggcttttttgccaccaataaaaacaaaaattccccggaaatgtgaaaaaaaaaaacacaacccccaaaaaacattgaa > SRR19973081.268153/1‑71 (MQ=60)
CGCTTTTCAAGTATGTTGCTAAAAATTTTATTAAAAACGGCCTGCGGGCCTT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTC < SRR19973081.2992565/150‑1 (MQ=60)
CTTTTCCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTgtttttttttgtgggtttttgggttttttgccacccataaaaccaaaaattaccggggaatgtgtaaaaaaaaaccaaaacgcgcactaaaccgtaaaga > SRR19973081.3063107/1‑50 (MQ=60)
TTTCAAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACT < SRR19973081.4405750/150‑1 (MQ=60)
TCCTGTATGTTGATAAAAATTTTATTAAAAACGGCCTGGGGGCCGT‑TTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCA < SRR19973081.491830/150‑1 (MQ=60)
CCAGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTgtttttttttgtttatttttgggatttttgccaccaataagaacaaaaattgcccggaaatttttaaaaaaaaacaaaaaccccccaaaaacctttaagcaaaaa > SRR19973081.4323083/1‑45 (MQ=60)
CAGTATGTTGCTAAAAATTTTATTAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATA < SRR19973081.728226/150‑1 (MQ=60)
AGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTgtttttttttgtggctttttcgcgtttttccccccaatcagaccaaaaaatccccggcaattggtaaaaaaaacccacagcgcgccaaaaaccttgtcgaagcataa > SRR19973081.2323394/1‑43 (MQ=60)
AGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGTgtttttttttatggatttttggcttttttgacaccaataaaaacaaaaattcccgggaaaagtgaaaaaaaaaaagacaccgcgccaaaaaccatatcgacaaaaaa > SRR19973081.4789125/1‑43 (MQ=60)
AGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTttgttgatttttggattttttcccaccaatcagaacaaaaaatacccgggaatttgtaaaaataaaagacaccgcgcaaaaaaccatctagaaacataa > SRR19973081.2323520/1‑51 (MQ=60)
AGTATGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTTCGCTTTTTTCCCAGCAATCAGACGAAAAatgaccgcgaaattttaaaaaaaaagcgacagcgcccaaaaacccgtctagacgaaaaa > SRR19973081.4490241/1‑91 (MQ=60)
TGTTGCTAAAAATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGT < SRR19973081.3896711/150‑1 (MQ=60)
GTTGCTAATTATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTG < SRR19973081.3831145/150‑1 (MQ=60)
CTAAAAATTTTATGAACAACGGCCTGCGGGGCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGC < SRR19973081.1324665/150‑1 (MQ=60)
TAATGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCC < SRR19973081.2628870/150‑1 (MQ=60)
AAAAATTTTATTAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCG < SRR19973081.1818257/150‑1 (MQ=60)
AATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTA < SRR19973081.2488262/150‑1 (MQ=60)
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GTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGT‑TTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATTGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTA > CP009273/450141‑450439
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
