Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F17 I0 R1 124 155.2 3079696 98.3% 3027341 226.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 433,649 T→G 18.5% G65G (GGT→GGG)  ribD → fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913433,6490TG18.5% 197.8 / 11.5 133G65G (GGT→GGG) ribDfused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase
Reads supporting (aligned to +/- strand):  ref base T (34/68);  new base G (20/7);  total (58/75)
Fisher's exact test for biased strand distribution p-value = 1.76e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.20e-01

Only 100 of 134 total aligned reads displayed.

AATTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCAC  >  NC_000913/433417‑433885
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                             
 aTTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGG‑AAAAA‑GCC‑AAGGTGCGGcc                                                                                                                                                                                                                                         >  2:143082/1‑238 (MQ=255)
   ttGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGcc                                                                                                                                                                                                                                      <  1:520600/239‑1 (MQ=255)
         aaGAGACCGCGCGCCTGGAGGACGAAGCCGGGGAGGACGAGTATTACATGGCGGGGGCGCAAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTGGGTGAAGGTTACCCCCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGt                                                                                                                                                                                                                                 <  2:831368/238‑1 (MQ=255)
                 gcgcgcCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGa                                                                                                                                                                                                                        <  2:619516/239‑1 (MQ=255)
                     gcCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGAcc                                                                                                                                                                                                                                         <  1:1138248/218‑1 (MQ=255)
                      ccTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑GCCAAAGGGGCGACCGCCCATGTAACAACCGAAcc                                                                                                                                                                                                                     >  1:282044/1‑237 (MQ=255)
                          gaggaCTAAGCCGTGAAGGACGAGTATGACATGGGGCGGGCGCTAAGGCTGGGGCAACGAGGACGTTTTACCACGAAACCCAACCCTAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGGCGGGGAAGGTTACCCCGAACGGGCGGGTGAACCACAGGCCGAAGTACCCGCTTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTa                                                                                                                                                                                                                <  2:187718/238‑1 (MQ=255)
                                 aaGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑AACCAAAGTGCGACCCCCCATGTCACACCCGAACCCTGTAACcagcat                                                                                                                                                                                                        >  2:1285050/1‑239 (MQ=255)
                                 aaGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GAAAA‑GCCAAAAGGGCGACCGCCCATGTCACACCCGCACCCCGtgaccctcac                                                                                                                                                                                                        >  2:1403248/1‑230 (MQ=255)
                                       tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGt                                                                                                                                                                                                 >  1:689007/1‑239 (MQ=255)
                                       tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GACAAAGGTGCGAGCGCCTATGTCACACTCGAAACCTGTAGCCATACTGGT‑AGt                                                                                                                                                                                                 >  1:862384/1‑239 (MQ=255)
                                         cAGGGCGAGTATTACAGGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTa                                                                                                                                                                                                <  1:99223/238‑1 (MQ=255)
                                         cAGGGCGAGTATTACAGGGCGCGGGCCAGAAAGCTGGCGCAACGAGGCCGTTTTACCACGCACCCCAACCCGAATGTCGGGGGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGTTTACCACCACCGTGCGGGTAAACCACATGCCGAAGTACACGCGTTGCGTAGGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTa                                                                                                                                                                                                <  2:655720/238‑1 (MQ=255)
                                         cAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGCACCCTGTAGCCAACATGGT‑CGTAc                                                                                                                                                                                               >  1:1440982/1‑239 (MQ=255)
                                           ggagtgttATTCCATGGGGTGGGCGCAAAGGCGGGAGAAAGGGGGCCGTTTTACCCCGGATCCCAGCCCAAATGTGGGGTGCGTCATTGCCAAAGATGGCGAAATTGGGGGTGAAGGTTACCACCAGCGTGGGGGTGAACCGCATGCCAAAGTACACGCGTTGCTTATGGC‑GGGTG‑AAAAC‑GCCAAAGGTGCCACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACg                                                                                                                                                                                              <  2:269868/231‑1 (MQ=255)
                                             aCGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCTTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACg                                                                                                                                                                                              <  1:467185/236‑1 (MQ=255)
                                              cGATTATGACATGGGGCGGGCGGTAAAGCGGGCGCAACGTGAACGTTTTCCCACGCGTCCCATCCGGAGTGTCGGTTGCGTAATTGACAAAGATGGCGAAATGGGGGGTGAAGGTTCCCGCAAACGTGCGGGTGAACCACTTGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAGGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCa                                                                                                                                                                                           <  2:1245139/238‑1 (MQ=255)
                                              cGAGTATTCCATGGCGCGGGGGCTAAAGCTGGGGCAACGAGGCCGTTTTACCCCGCATCCCAACCCGAATGGCGGGGGCGTCATTGTCAAAGATGGCGAAATTGTCGGGGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCa                                                                                                                                                                                           <  1:448732/238‑1 (MQ=255)
                                              cGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCa                                                                                                                                                                                           <  1:1455358/238‑1 (MQ=255)
                                              cGAGTAGTCCAGGGCGCGGGCGCTAAAGCGGGCGAAAGGAGGACGTTTTACCACGCACCCCAACCGGAATGCCGGGGGGGTCATGGTAAAAGATGGCGAAATTGTCGGTGAGGGTTACCACCAACGTGCGGGTAAACCACAGGCGGAAGTACACGCGTTGCGTATGGC‑GGGTA‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCa                                                                                                                                                                                           <  2:1032489/238‑1 (MQ=255)
                                                       cATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCCCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGCACGCCAccgtgccgtg                                                                                                                                                                                 >  1:1026905/1‑239 (MQ=255)
                                                          ggCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCCATGTCACACTCCAACCCTGTAGCCATCATGGT‑CCGACCCCACCCGGCTGTGAc                                                                                                                                                                               >  1:701793/1‑238 (MQ=255)
                                                            cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGc                                                                                                                                                                             >  1:1212619/1‑238 (MQ=255)
                                                            cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTTTGTCACACTCCGACCCCGTAGCCCTCATGGT‑CGTACGCCACCGCGCTGTGgcgc                                                                                                                                                                             >  1:83802/1‑238 (MQ=255)
                                                            cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGc                                                                                                                                                                             >  1:247641/1‑238 (MQ=255)
                                                            cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GGAAA‑ACCCAAGGGGCGACCGCCCATGTCCCACTCGAAACCTGGAGCCCTCATGGG‑CGTACGCcccccgtccgggaccc                                                                                                                                                                             >  2:465391/1‑226 (MQ=255)
                                                            cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GAAAA‑ACCAAAAGGGCGACCGCCCATTTCCCCCCCGAACCCTGTAGCCATCATGGT‑CCGACGCCCCCGCGCTGTGAAGc                                                                                                                                                                             >  2:868347/1‑238 (MQ=255)
                                                            cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GAAAA‑ACCAAAAGAGCGACCCCCTATGGTACACCCGGACCCCGTAGACATCATGGG‑CGCACGCCCCCCGGCtgttgcgc                                                                                                                                                                             >  2:36479/1‑233 (MQ=255)
                                                              cgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACCCGCACCCCTAAACCACCACTGT‑CGTACCCCCCCGCGCTTGGACCCAc                                                                                                                                                                           >  2:1042685/1‑238 (MQ=255)
                                                                  cgcTAACGCTGGCGCACCGAGGCCGTTTAACCCCGCATCCAAACCCGAATGTGGGGGGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTCCCACCAACGTGGGGGTAAACCACATGCCGAAGTCCGCGCGTTGCGTATGGC‑GGGTG‑AAAAG‑CCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCAt                                                                                                                                                                       <  2:181175/238‑1 (MQ=255)
                                                                   ggtAAAGCTGGGCGAACGGGGGCGTTTAACCACGCATCCCAACCCGAAGGGCGGGGGCGTCATTGTCAAAGAGGGGGAAGTTGTCGGTGAAGGTTACCACCAACGGGCGGTTGAACCACATGCCGAAGTACCCGCGTTGCGTATGGC‑GGGTG‑AAAAA‑TCCAAAGGTGCCGCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATc                                                                                                                                                                      <  2:187079/236‑1 (MQ=255)
                                                                     tAAAGCTGGCGCAACGAGGACGTTTTACCACGCACCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATcgc                                                                                                                                                                    <  1:1040377/238‑1 (MQ=255)
                                                                                    gAGGACTTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTAAAAGATGGCAAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAgcgcgc                                                                                                                                                    <  1:1403248/239‑1 (MQ=255)
                                                                                    gAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAgcgcgc                                                                                                                                                    <  1:1285050/239‑1 (MQ=255)
                                                                                         cGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTCCACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGt                                                                                                                                               <  1:726772/239‑1 (MQ=255)
                                                                                               aCCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCCCTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTc                                                                                                                                         >  1:1340961/1‑239 (MQ=255)
                                                                                                ccccGCACCCCAACCCGAATGTGGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGACCCACATGCCGAAGTACACGCGTGGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCg                                                                                                                                        <  2:437205/236‑1 (MQ=255)
                                                                                                    gCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGc                                                                                                                                    >  1:1095700/1‑239 (MQ=255)
                                                                                                     cctCCCAACCCGAATGTCGGGTGCGGCGTTGTCAAAGTTGGCGAAATTGTCGGTGAGGGTTACCACCAACGTGCGGGTGAACCACATGCCGAATTACACGCTTTGCGTATGGC‑GGGTA‑AAAAA‑GCCAAAGGTGCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa                                                                                                                                   <  2:322790/237‑1 (MQ=255)
                                                                                                     cATCCCACCCCGAATGTCGGGTGCGTCATTGTCAAAGAGGGCAAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa                                                                                                                                   <  2:918504/239‑1 (MQ=255)
                                                                                                      aTCCCAACCCGAATGTCGGGTGCGTCATTGTCAAGGATGGCGAAATGGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCaa                                                                                                                                  <  2:701886/239‑1 (MQ=255)
                                                                                                      aTCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑ACCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATTGT‑CGTACGCCACCGTGCTGTGAACCCCTCATCGCCGCCGGCGTCACGCGCCGGGGTGCCTCGATGCac                                                                                                                                  >  1:524058/1‑238 (MQ=255)
                                                                                                        cccAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑ACCAAAGGGGCGACCGCCTATGGCACACCCGGACCCTGTAGCCACCATGGG‑CGTACGGCACCCTGACGTGACGCACCCCACCCCGCTGGGGTTTGGCGCATGGTTGCCCCggctccag                                                                                                                                 >  2:602341/1‑231 (MQ=255)
                                                                                                              ccGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTc                                                                                                                                         <  1:1325508/224‑1 (MQ=255)
                                                                                                                gAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑GCCAAAGGTGCGACCGCCTCTGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCCCGATGCAAGATCCTAAc                                                                                                                         >  1:94892/1‑238 (MQ=255)
                                                                                                                  aTGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑GAAAA‑GCCAAAGGGGCGACCGCCTATGTCACAATCGAACCCTGTAGCCATCCTGGT‑CGTACGCCCCCGTGCTGTGACGCACTCCCCGCCGCCGGCGTAGCGCGCGGGGTTGCCTCGCTGCAAGCGCCTCAccc                                                                                                                       >  2:745473/1‑238 (MQ=255)
                                                                                                                  aTGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGGACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGGGGGTGCCCCGATGCAAGATCCTAAccc                                                                                                                       >  1:1108539/1‑238 (MQ=255)
                                                                                                                  aTGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GAAAA‑GCCAAAGGGGCGACCGCCCATGTCACACTCGAAACCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCCCTGGCGTAGCGCGCGGGGTTGCCTCGAGGCCAAATCCTAAccc                                                                                                                       >  2:1043413/1‑238 (MQ=255)
                                                                                                                       gggTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAgg                                                                                                                  >  1:684139/1‑238 (MQ=255)
                                                                                                                        ggTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTc                                                                                                                >  1:180541/1‑239 (MQ=255)
                                                                                                                        ggTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GAAAA‑ACCAAAGGTGCGACCGCCCATGTCACACCCGAACCCCGTAGCCATCATGGT‑CGGACGCCCCCGTGCTGTGACGCACCCATCGCCGCCGGCGTAACGCGCGTGGGTGCCTctctcgaagat                                                                                                                               >  2:1325508/1‑214 (MQ=255)
                                                                                                                            cGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑GAAAA‑ACCAAAAGAGCGACCCCCTATGTCACACTCCAACCCTGTAGCCATCATGGT‑AGTAACCCACCGCGCTGTGACCCCCCCAACCCCGCCGGCGTACCCCGCCGCGTTGCCCCCATGCCAGCGCCTCAccccccggcggcgc                                                                                                            >  2:928009/1‑228 (MQ=255)
                                                                                                                               cATTGGCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGTTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGc                                                                                                         <  1:381862/239‑1 (MQ=255)
                                                                                                                                cgggtaaaaGATGGCGAAATTGTGGGTGAAGGTTACCCCAAAGGGGCGGGGAAACCAAATGCCAAAGTACCCGGGTTGCGTAGGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCAACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGc                                                                                                         <  2:1304536/232‑1 (MQ=255)
                                                                                                                                 ttGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCGGAAGTACACGCGTGGCGTATGGG‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGt                                                                                                       <  1:589788/239‑1 (MQ=255)
                                                                                                                                 ttGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGt                                                                                                       <  1:332890/239‑1 (MQ=255)
                                                                                                                                      aaaGATGGGGAAATTGTCGGTGAAGTTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACt                                                                                                  <  1:267311/239‑1 (MQ=255)
                                                                                                                                         tggataaagagcaagggTGAAGGTTCCCACCAACGTGGGGGAAAACCACAGGCAGAAGTCCCCGGGTTGCGTAGGGC‑GGGGA‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTa                                                                                               <  2:1526856/224‑1 (MQ=255)
                                                                                                                                           tGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCCCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAcc                                                                                             >  1:494333/1‑239 (MQ=255)
                                                                                                                                           tGGCGAAATTGTCGGTGAAGGTTACCACCAACGGGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAcc                                                                                             <  1:1500827/239‑1 (MQ=255)
                                                                                                                                              cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGt                                                                                           <  1:1456095/238‑1 (MQ=255)
                                                                                                                                              cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCg                                                                                            >  1:550733/1‑237 (MQ=255)
                                                                                                                                              cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGCACACGCGTTGCGTATGGC‑GGGTG‑GAAAA‑GCCAAAGGCGCGACCGCCTATGTCACACGCGAAACCTGTAGACCTCCTGGT‑CGTACGCCAACGCGCTGGTCCGCACTCATCCCCGCGGGCGGAGCGCGCGCGGTTGCCCCGATGCAAGGGACTTACCCGCGGGTCGcccgcggcgtgattgaccgt                                                                                           >  2:1212336/1‑219 (MQ=255)
                                                                                                                                                        ggTGAGGTTCACCACAAACGGGGGGGTAACCCACATGCCGAAGTACCCGCGTTGCGTATGGC‑GGGTA‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg                                                                                 <  2:1340961/238‑1 (MQ=255)
                                                                                                                                                                   ccaccaGCGGGCGGGTGACCCACATGCGGAAGCACCCGCTTTGCGTAGGGC‑GTGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACg                                                                     <  2:282044/239‑1 (MQ=255)
                                                                                                                                                                   ccaccaACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCaa                                                                                     >  1:1526856/1‑223 (MQ=255)
                                                                                                                                                                    ccccaACGGGGGGGTGAACCACATGCCGAAGGACCCGCTTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAGGGTGCCACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCg                                                                                                        <  2:694348/201‑1 (MQ=255)
                                                                                                                                                                    caccaGCGGGCGGGTGACCCACATGCCGAAGTACACGCGTTGCGTAGGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGt                                                                    <  2:447894/239‑1 (MQ=255)
                                                                                                                                                                        aaCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑GAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCAATGCAAGATCCTAACCCGCCGGTCGCTGGGGGGGGACTTTACCGTCTGCAACAGGCTGGCATTGACGGCAg                                                                 >  2:431143/1‑238 (MQ=255)
                                                                                                                                                                         aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑GCCCAAGGGGCGACCGCCCATGTCACCCTCCAACCCTGTAGCCCTCATGGT‑CGTAGCCCACCGTGCTGTGACGCACTCATCGCCGCTGGCCGACCGCGCGTGGTTGCCTCCATGGCAGGTCCTCACCCGCAGGGCCGCGGGCGTGGACTTTTCCGTTCGCAACCGGCTGGCATTTAAGTCaca                                                                >  2:810790/1‑236 (MQ=255)
                                                                                                                                                                         aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCCAACCCTGTAGCCCTCATGGT‑CGTACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCCCGATGCAAGATCCTAACCCGCCGGTCGCTTGGCGTGGACTTTACCGTCTGCAACAGGCCGGCATTGACGTCCGc                                                                >  2:1144583/1‑238 (MQ=255)
                                                                                                                                                                         aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGGG‑AAAAA‑ACCCAAAGTGCGACCGCCCAAGTCACACTCGAAGCCTGTAGCCATCATGGTCCGCAC‑CCACCGTGCTGTGACGGACTCATCCCCGCTCGCGTAGCGCGCCTGGGTGGCCCGCTGCACGCTCCTAACCCCCAGGCCCCCGGGCGTGGACATTTCCGTCTGCGACaacgcggcctttccggcacc                                                                >  2:589422/1‑219 (MQ=255)
                                                                                                                                                                          cGTGGGGGTGAACCACATCCCGAATTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                              <  1:602341/239‑1 (MQ=255)
                                                                                                                                                                          cGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                              <  1:1292035/239‑1 (MQ=255)
                                                                                                                                                                           tggggtgtaaacccaaggCCGAATGACCCGGGTTGTGTATGG‑‑GGGTGAAAAAA‑GCCAAGGGTGCTACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                              <  2:167198/221‑1 (MQ=255)
                                                                                                                                                                           gggCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGcc                                                               <  1:1507366/235‑1 (MQ=255)
                                                                                                                                                                            tggggggaaaCCACAGGCCGAAGTACCCGCGTTGCGTATGGC‑GGTTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                              <  2:83802/229‑1 (MQ=255)
                                                                                                                                                                              cGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGGCTTTACCGTCTGCAACAGGCTGGCATTTGCGTCAGCCACgg                                                           >  1:1149950/1‑238 (MQ=255)
                                                                                                                                                                               gggTGAACCCCATGCCGAAGTACACGCGTGGCGTATGGG‑GGGGG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGc                                                          <  2:494333/238‑1 (MQ=255)
                                                                                                                                                                                 gTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtg                                                       >  1:1278012/1‑239 (MQ=255)
                                                                                                                                                                                    aacccaaggcggaagtcccggcgTGGCGAAGGGC‑GGGTG‑AAAAA‑GCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgatg                                                    <  2:247641/219‑1 (MQ=255)
                                                                                                                                                                                    aaCCACATGCCGAAGTACCCGTGTGGCGTATGGC‑GGGTA‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgatg                                                    <  2:524058/239‑1 (MQ=255)
                                                                                                                                                                                    aaCCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgatg                                                    >  1:137623/1‑239 (MQ=255)
                                                                                                                                                                                     aCCCCACGCCGAAGTCCCCGAGTTCCGCATGGG‑GGCAG‑AAAAG‑GCCATAGGGGCGTCCGCCTATGTCACACTCGAACCCTGTAGCCATGATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGAGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGCCTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgatg                                                    <  2:1488788/238‑1 (MQ=255)
                                                                                                                                                                                     aCCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa                                                                                                                                   <  1:1019232/159‑1 (MQ=255)
                                                                                                                                                                                     aCCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa                                                                                                                                   >  2:1019232/1‑159 (MQ=255)
                                                                                                                                                                                         agggCCGAAGTCGACCCGTGGCGTATGGG‑TGGAG‑AAAAG‑TACAAGGGGGGGACCGCCTGTGTCACACCCGAACCCTGGAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCCCTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAg                                               <  2:1212619/236‑1 (MQ=255)
                                                                                                                                                                                           tGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTg                                             >  1:1090168/1‑239 (MQ=255)
                                                                                                                                                                                           tGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCCCCGTGCTGTGACGCACTCATCCCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCACGATCCTAACCCCCAGGTCGCTGGGCGTGGGCTTTACCGTCTGCAACACGCTGGCATTGACGTCAGCCCCGGCCTGTTgaggaggg                                             >  2:385472/1‑237 (MQ=255)
                                                                                                                                                                                              cGAAGTACCCGCGTTGCGGATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAg                                          <  1:1394504/239‑1 (MQ=255)
                                                                                                                                                                                                    acacGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg                                     <  1:868347/238‑1 (MQ=255)
                                                                                                                                                                                                      acGCGTTGCGTATGGG‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCaa                                  <  1:1345390/239‑1 (MQ=255)
                                                                                                                                                                                                                ggagtggcggTG‑AAAAAGGCCAAGGGTGCGCCCGCCTATGTCACACGCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCGCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATa                           <  2:174917/230‑1 (MQ=255)
                                                                                                                                                                                                                  tGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGGTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGGGAAGCCGAGCAATTGAATAAAg                        >  1:901616/1‑237 (MQ=255)
                                                                                                                                                                                                                         gTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCCGGTCGCTGGGCGGGGGCTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACCGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTtttc                >  2:1253252/1‑239 (MQ=255)
                                                                                                                                                                                                                         gTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg                                     >  1:825581/1‑218 (MQ=255)
                                                                                                                                                                                                                         gTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGGTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCCCGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTtct                 >  1:465609/1‑238 (MQ=255)
                                                                                                                                                                                                                             aaaaa‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTGCGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg             <  1:643961/239‑1 (MQ=255)
                                                                                                                                                                                                                                     cAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATgc      >  1:739485/1‑239 (MQ=255)
                                                                                                                                                                                                                                      aaaGGTGCGCCCGCCTTTGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATgcg     <  2:801447/239‑1 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                             
AATTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGC‑GGGTG‑AAAAA‑GCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGT‑CGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCAC  >  NC_000913/433417‑433885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A