Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,132,787 A→C 100% I204S (ATC→AGC)  wcaA ← putative glycosyl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,132,7870AC100.0% 325.9 / NA 100I204S (ATC→AGC) wcaAputative glycosyl transferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (43/57);  total (43/57)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

CTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCA  >  NC_000913/2132556‑2133022
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                            
cTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATTTGCAGGCTCTGCGt                                                                                                                                                                                                                                       >  1:937986/1‑239 (MQ=255)
 tgtAGCGCCCCCGAATACCATCGGCCAGCGGTTTCGCGTTAGTCACCGACAGCAGCGGCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTc                                                                                                                                                                                                                                      <  2:472285/237‑1 (MQ=255)
   tAGCCCCCCGGAATCCCAATCGGCAGCCGTTTGGCGGTGCGCGACGACAGCAGCGTAAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCGGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCGTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGc                                                                                                                                                                                                                                    <  2:470604/239‑1 (MQ=255)
        cccccGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGAATTTCACCGTGATTGATATGCAGGCCCTGCGtgccccct                                                                                                                                                                                                                                >  2:611152/1‑231 (MQ=255)
          cccGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAATGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGATGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTGTTTCGGTGCCTAGGTGATCTGCATTTAACAGTGATTGATATGCAGACTATGCGTGGACtcctct                                                                                                                                                                                                                             >  1:919437/1‑239 (MQ=255)
           ccGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCTGTGACGAGGTGATCTGCATTTCACCGTGATTGATATTCAGCCTCTGCGCCGCCtcttct                                                                                                                                                                                                                             >  2:234660/1‑238 (MQ=255)
                  ccaaccgCCAGACGGTTGCCGTTACCGACCGACAGCAGCGGCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCa                                                                                                                                                                                                                     <  2:669111/233‑1 (MQ=255)
                   cATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTcccc                                                                                                                                                                                                                    >  1:564060/1‑237 (MQ=255)
                    aTCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACg                                                                                                                                                                                                                   >  1:632696/1‑239 (MQ=255)
                     tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCCCgg                                                                                                                                                                                                                  >  1:541195/1‑239 (MQ=255)
                          cAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGtt                                                                                                                                                                                                                <  1:1264127/236‑1 (MQ=255)
                            ggccgttgctcttgcggcccGACAGCGGGGTTAGCAAAGTGGTCCAGGGCATTCGTTTTTTGCGGATCTGGTGGGGGGTAAACAGCTGATATTTGTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTAATTGCCACGGTTCGCCg                                                                                                                                                                                                           <  2:534352/221‑1 (MQ=255)
                            ggcGTTTGCCGTTACGCACCGATAGCAGGGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCg                                                                                                                                                                                                           <  1:922857/237‑1 (MQ=255)
                            gACGTTTTCCGTTTCGCCCCTGCGGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCg                                                                                                                                                                                                           <  2:331835/239‑1 (MQ=255)
                             aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTAACCGTGATTGATATGCAGGCTATGCGTCGCCTCTTCTACTTTCCCCGGTTCGCCGt                                                                                                                                                                                                          >  1:277270/1‑239 (MQ=255)
                                 ttGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACt                                                                                                                                                                                                       >  1:152825/1‑238 (MQ=255)
                                  tGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTc                                                                                                                                                                                                      >  2:488584/1‑238 (MQ=255)
                                  tGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTc                                                                                                                                                                                                      <  1:488584/238‑1 (MQ=255)
                                        ttccccccGGCAGCAGCGTCAGCAAAGTGCGCCAGGTTATTCGGTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTccaccacc                                                                                                                                                                                               <  2:1163106/233‑1 (MQ=255)
                                           gCACCGACAGGAGCGTCAGCAAATGGCGCCAGGTCATACGTTTAGTGCGGATCTGGTAGAGGTTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATc                                                                                                                                                                                            <  1:1197331/239‑1 (MQ=255)
                                               cGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCCTCCgaa                                                                                                                                                                                        >  1:930182/1‑237 (MQ=255)
                                               cGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCCCTGCGTTGCCTCTTCTACTTTCCCCGGTTAGCCGTACTCCACCACCACCCGCa                                                                                                                                                                                        >  1:940044/1‑239 (MQ=255)
                                                      cgtttgcagaaaGTGGCCCGGGTCATGGGTTTATTGGGGATCTGGTAGAGGGTTAACAGCTGATATTTTTTGCTG‑GCGGGGGCGAATTTGTCTGTGTGCGTGCGGTAAAAGTGGATGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATGGATATGCAGGCTCTGCGTCGCCTCTTCTTCTTTCCACGGGTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                                  <  2:937986/229‑1 (MQ=255)
                                                      cgcGTCAGCAAAGTGCGCCTGGTCATCGGTTTATGTGGGACTTGGTAGGGGGTAAACAGGTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGaa                                                                                                                                                                                    <  2:269716/235‑1 (MQ=255)
                                                      agggTCAGCAAAGGTGACCAGGTCATGCGTTTATTGGGGATCTGGGAGGGGGGAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTGTTTGGGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                                  <  2:564060/235‑1 (MQ=255)
                                                      agcGTCAGCAAATTGCGCCAGGTCATACGTTTATTGCGGATCTGTTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTTTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                                  <  1:928179/238‑1 (MQ=255)
                                                      agcGTCAGCAAAGTGCGCCAGGTCATTCGGTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTGGCTG‑GCGCGGTCGAATTTGTCGTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                                  <  1:390106/238‑1 (MQ=255)
                                                         gTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTa                                                                                                                                                                                                                            >  1:284608/1‑193 (MQ=255)
                                                         gTCAGCAAAGTGCGCAAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCCCCTCTTCTACTTTCCACGGTTCGCCGTACTCCAACACCACCGGCAGGAAGATGtg                                                                                                                                                                              >  1:1115679/1‑238 (MQ=255)
                                                                   tGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCtgt                                                                                                                                                                   >  1:428982/1‑239 (MQ=255)
                                                                       ccAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATTTTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGcc                                                                                                                                                                <  1:753705/238‑1 (MQ=255)
                                                                            ttaTACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATAGTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCttt                                                                                                                                                           <  1:819978/236‑1 (MQ=255)
                                                                                     tATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCtcttct                                                                                                                                                                                                                             <  1:762254/164‑1 (MQ=255)
                                                                                     tATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCtcttct                                                                                                                                                                                                                             >  2:762254/1‑164 (MQ=255)
                                                                                     tATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCCCCATCCCACGGAAAATGT‑CGAAATCCGTGGCCCCTTTCAGTTCgga                                                                                                                                                  >  2:1197643/1‑237 (MQ=255)
                                                                                     tATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCTCAGGAAGAAGT‑CGTAATACTGTGCCGCTTTCAgatggcaa                                                                                                                                                 >  2:386817/1‑232 (MQ=255)
                                                                                      ttttcgtgttttgttggggttAAACGGTTGATTTTTTGTTCTG‑GCGCGGTTGAATTTGGTTTTGTGCTTGCGGGAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGAGATGCAGGCTCTGCGTCGCCTCTTCTACTTTTCACGGTTCGCCGTACTCCCCCTCCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTAt                                                                                                                                                <  2:512955/219‑1 (MQ=255)
                                                                                      tttGCGGGTTTTGTTGGGGGTAAACCGTTGATTTTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTAt                                                                                                                                                <  2:632696/238‑1 (MQ=255)
                                                                                      aTTGCGGATTTGGGAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCGTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACGTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTAt                                                                                                                                                <  1:611152/239‑1 (MQ=255)
                                                                                      aTTGCGGATCTGGTAGGGGGTAAACAGCTGATAGTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTAt                                                                                                                                                <  1:50985/239‑1 (MQ=255)
                                                                                      aTTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCCCGGTTTGCCGTACTCCCCCCCCACCCCCAGGAAAATGT‑CGTAATCCTGGGCCGCTTTCAGTTCGGAAt                                                                                                                                                >  2:830776/1‑239 (MQ=255)
                                                                                        tggtgtttttgttgggtgTAAACAGCTGTTTTTTTTTGCTGTGCG‑GGTTGAATTTTTCTTTGTGGCTGCTGTAAAAGTGTAAGTACCCGGAGTATTTTTTCGGTGCCGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTTCTTTCCACGGTTCGCCGTACTCCACCTCCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCg                                                                                                                                              <  2:1115679/222‑1 (MQ=255)
                                                                                              gtttgtggggggTAACAATCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGTTTGCGGTAAAAGTGGAAGTACCCGGAGAA‑TTTTTCGGTGACGAGGTGATCTGCATTTCCCCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa                                                                                                                                        <  2:776772/229‑1 (MQ=255)
                                                                                               tcggTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa                                                                                                                                        <  1:713512/236‑1 (MQ=255)
                                                                                               cTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaac                                                                                                                                       <  1:892038/239‑1 (MQ=255)
                                                                                               cTGGTAGAGGGTAAACAGCTGATATTGTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa                                                                                                                                        <  1:1197643/238‑1 (MQ=255)
                                                                                                tGGTAGAGGGTAAACAGCTGATATTTTTTGCGG‑GCGCGGTCGAATTGGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca                                                                                                                                      <  1:876138/239‑1 (MQ=255)
                                                                                                        ggTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                                  <  2:673090/188‑1 (MQ=255)
                                                                                                        ggTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                                  >  1:673090/1‑188 (MQ=255)
                                                                                                        ggTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTTTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGa                                                                                                                              >  1:476136/1‑239 (MQ=255)
                                                                                                        ggTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACCCTTTGa                                                                                                                              >  1:590711/1‑239 (MQ=255)
                                                                                                        ggTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACACCCATCCGCAGGAAGTTGT‑CGTAACCCTGGGCCGCTTTCAGTTCGGTATCGAAAAAAAACCCTTTGa                                                                                                                              >  2:1255551/1‑239 (MQ=255)
                                                                                                        agTAAACAGCTGATATTTTTTTCTG‑ACGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGGGACGAGGCGATCTGCATTTCACCGTGATTGTTATGCAGGCTCTGCGTGGCACATTCTCCTTTCACGGGTTCACCTCACTCACCCACCTTCC‑CACGGATATGTCCGTATTCCTGTGCGGCTTCCACTTCggattcaaccaacaccacttgtg                                                                                                                              >  2:978206/2‑218 (MQ=255)
                                                                                                         gTAAACATCTGATATTGTTTGTTG‑GCGCGGTCTAATTTGTCTTTTGTCTTGCGGTAAAAGTGGAAGTACCGGGAGAATTGTTTCGGTGAGGAGGTGACCTGTATTTCACCGTGATTGATATGCAGGCTATGTGTCGCCTATTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGC‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGa                                                                                                                              <  2:1347592/238‑1 (MQ=255)
                                                                                                          tAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGCAGATTC‑CGTAATCCTGGGCGCATTTCAGTTCGGTATCAAACAAACCCACTTTGaa                                                                                                                             >  2:604404/1‑238 (MQ=255)
                                                                                                            aaCAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAAAACTCTTTGAAAc                                                                                                                           >  1:1281567/1‑238 (MQ=255)
                                                                                                             aCAGTTTATATTTTGTGCTG‑GCGCGGTCGAATTTGTCTTTGGGCTTGCGGTAAAAGTGGAAGTGCCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGc                                                                                                                         <  1:604404/239‑1 (MQ=255)
                                                                                                                  tGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCCCGGTTCGCCGTACTCCCCCACCATCCCCACGAAGATTT‑CGTAATCCTCTGCCCCCTTCAGTTTGGTATCGACCAAACACCCTTTGAAACGCCATg                                                                                                                     >  2:479380/1‑238 (MQ=255)
                                                                                                                  tGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATg                                                                                                                     >  1:138692/1‑238 (MQ=255)
                                                                                                                    atatTTTTTGAGG‑GCGTGGTCGAATTTGGCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTAACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGccc                                                                                                                  <  1:795125/239‑1 (MQ=255)
                                                                                                                         ttttGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTa                                                                                                             <  2:806219/239‑1 (MQ=255)
                                                                                                                          ttttgtG‑GGGCGGTCGATTTTTTTTTTTTTCTTGGGGTAAAATTGGAAGGTCCCGGAAAATTTTTTCGGTGACGAGGTGATCTGCATTTCCCCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTTCTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTaa                                                                                                            <  2:541195/234‑1 (MQ=255)
                                                                                                                                    gggggcGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTTATATGCAGGCCCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTgg                                                                                                    <  2:930182/233‑1 (MQ=255)
                                                                                                                                     gggTCGAATTTTTCTTTGGGCTTGCGGTAAAAGTGGAGGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGt                                                                                                   <  2:152825/237‑1 (MQ=255)
                                                                                                                                     cggtgtgttttGTTTTTTTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt                                                                                                  <  2:627545/231‑1 (MQ=255)
                                                                                                                                      ggTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt                                                                                                  <  1:130368/238‑1 (MQ=255)
                                                                                                                                         cGATTTTGTTTTTGTGCTTGTGGTAAAAGTGGAAGTTCCCGGAAAATTTTTTCGGTGACGAGGTGTTCTGCACTTCCCCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTTCTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCa                                                                                              <  2:97161/239‑1 (MQ=255)
                                                                                                                                                ttttttGTTCTTGCGGTAAAAGTGGAAGTTCCGGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCCCCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGatat                                                                                       <  2:1213055/236‑1 (MQ=255)
                                                                                                                                                gttcttGTGCTTGCGGTAAAAGTGGAAGTTCCCGGAGAAGTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGatat                                                                                       <  1:479380/235‑1 (MQ=255)
                                                                                                                                                   ttttttcTTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGGCGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGc                                                                                    <  2:1281567/233‑1 (MQ=255)
                                                                                                                                                   ttggtgCTTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCCACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGc                                                                                    <  1:80425/236‑1 (MQ=255)
                                                                                                                                                      gtgCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAACCGCCATGCCCAGGTAAAGACCTGGTTGCCAATATTATTACGtt                                                                                 >  2:257357/1‑239 (MQ=255)
                                                                                                                                                                  aaaGTGGAAGTCCCCGGAGATGTTTTACGGTGACGAGGGGATCTGCATTTCACCGGGATTGATTTGCAGGCTCTGCGGCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCAACCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAggc                                                                     <  1:1277551/239‑1 (MQ=255)
                                                                                                                                                                       ggAAGTACCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAggcggc                                                                  <  1:932422/237‑1 (MQ=255)
                                                                                                                                                                        gAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTg                                                               >  1:348154/1‑239 (MQ=255)
                                                                                                                                                                          aGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGaa                                                             >  2:114583/1‑239 (MQ=255)
                                                                                                                                                                          aGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATAT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGTTTGCCAATGCTATTGCGTTTGTAGACCAGGCGGCGTGaa                                                             >  1:1192149/1‑239 (MQ=255)
                                                                                                                                                                              cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTGCTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa                                                                                                                                        <  2:307835/160‑1 (MQ=255)
                                                                                                                                                                              cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTGCTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa                                                                                                                                        >  1:307835/1‑160 (MQ=255)
                                                                                                                                                                              cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCttt                                                                                                                                                           <  2:778111/141‑1 (MQ=255)
                                                                                                                                                                              cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCttt                                                                                                                                                           >  1:778111/1‑141 (MQ=255)
                                                                                                                                                                                cGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACAGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGCATTTGCGTTTGTAGAACAGGCGGCGGGAATACGGc                                                       >  1:403991/1‑239 (MQ=255)
                                                                                                                                                                                 ggggaATTTTTTCGGTGACGCGGTGGTCTGCATTTCACCGTTATTGATATGCAGGCTCTGCGTCGCCCCTTCTACTTTCCCCGGTTCGCCGTACTCCACCCCCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCg                                                      <  2:138692/236‑1 (MQ=255)
                                                                                                                                                                                    gaATTTTTGCGGTGACGAGGGTAACTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGAt                                                    <  1:654480/238‑1 (MQ=255)
                                                                                                                                                                                      ttttttttggtttccgtgtgtTCTTCTTTTCACCGTGATTGATATGCAGGCTCGGCGTCGGCTCTGCTTCGTTCCACGGGTCGCCGTTCTGCAACTCCATCCGGAAGAAGATGG‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAAAACGCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGGGGCCTGAATACGTCCATTTg                                                 <  2:580965/222‑1 (MQ=255)
                                                                                                                                                                                                          tttttcttttCCCCGTGATTTATTAGCGCGCTTTGCGTCCCCTCTTCTACTTTCCACGTTGCGCCTTCCCCCACCACCAACCGCAGGCAGATGT‑CGTAAGCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAATACCTGGGTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGc                             <  2:547829/232‑1 (MQ=255)
                                                                                                                                                                                                          tgtggttaagagacaggattgatATGCAGGCTTTGCGTCGCCTCTTCTACTTTCCCCGTTTCCCCGTACTCCACCGCCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGc                             <  2:254973/223‑1 (MQ=255)
                                                                                                                                                                                                           tCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGc                             <  1:114583/238‑1 (MQ=255)
                                                                                                                                                                                                              tcATTTCCCCTGGATTGGTATTCAGGCCCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGt                         <  2:428982/238‑1 (MQ=255)
                                                                                                                                                                                                                 tttCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCCTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATAc                                           <  1:975765/218‑1 (MQ=255)
                                                                                                                                                                                                                    cACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCttt                                                                                                                                                           >  2:1059644/1‑103 (MQ=255)
                                                                                                                                                                                                                    cACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCttt                                                                                                                                                           <  1:1059644/103‑1 (MQ=255)
                                                                                                                                                                                                                    cACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGGTACAGCGGCAAGCTTGCCGGTTGGGaa                   >  1:959451/1‑239 (MQ=255)
                                                                                                                                                                                                                    cACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTTCCGGGTgggga                   >  2:1355516/1‑237 (MQ=255)
                                                                                                                                                                                                                         tgattgatATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGTTACAACGGCAAGCTTGCCGGTTGGGAATAg                >  1:496872/1‑237 (MQ=255)
                                                                                                                                                                                                                           attgatATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGTTATTGCGTTTGTAGAACAGGCGGCGTGAAAACGGCGATTTGGGAAACAGTGGCAAGccaggtccattataccaatcgg            >  2:975765/1‑218 (MQ=255)
                                                                                                                                                                                                                                tatGCAGGCTCCGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGcc        <  1:364269/238‑1 (MQ=255)
                                                                                                                                                                                                                                 atGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGTTAATGCGTTTGTAGAACAGGCGGCGTGAATAGGGCGATTTGGGATAAAAGGGCAAACTTGCCGGTTggagaaaaaatcgccccg      >  2:541967/1‑223 (MQ=255)
                                                                                                                                                                                                                                     aGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCa  >  1:541893/1‑239 (MQ=255)
                                                                                                                                                                                                                                     aGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGGTGGGat                   >  1:254973/1‑221 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                            
CTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTG‑GCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGT‑CGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCA  >  NC_000913/2132556‑2133022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A