Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F9 I0 R1 71 67.1 1514203 90.7% 1373382 220.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,132,787 A→C 100% I204S (ATC→AGC)  wcaA ← putative glycosyl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,132,7870AC100.0% 222.6 / ‑6.7 79I204S (ATC→AGC) wcaAputative glycosyl transferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base C (33/43);  minor base T (0/2);  total (34/45)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACT  >  NC_000913/2132566‑2133011
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                  
cccGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑g                                                                                                                                                                                                                               >  1:595212/1‑227 (MQ=255)
 ccaaactccATCAGCTAGTATTTTGTCGTTTCGCCCCGAACGCGGGGTCCGCAAAGTGGGCCAGTTTATGCGTTTATTGCGGATCTGGTAGAGGGTAAACATCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTAACCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc                                                                                                                                                                                                                           <  2:326569/222‑1 (MQ=255)
 ccGAATACCATCAGTCAGTCGTTTGGCTTTCCGCGCCGATGGAGGCGTCAGCAAAGGGCGCCAGGTCATTCGGTTATTGCGGATCTGGTAGGGGGTAAACAGCCGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc                                                                                                                                                                                                                           <  2:225037/229‑1 (MQ=255)
 ccGAAACCCACCCGCCAGGCGTTTCCCGTTACGCACCGACAGCGGGGTCAGGAAAGGGTGCCAGGTCATACGTTTATTGCGGATCTGGTAGATGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc                                                                                                                                                                                                                           <  2:340519/229‑1 (MQ=255)
   gAATTCCATCAGCCAGACTTTTGCCGTTTCGTACCGACAGCAGCGTCAGCAATGTGCGCCAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc                                                                                                                                                                                                                         <  1:579628/229‑1 (MQ=255)
   gAATTCCATCAGCCAGACGTGTGCCGTTACTCACCGACAGCAGAGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc                                                                                                                                                                                                                         <  1:70854/229‑1 (MQ=255)
   gAATACCATCAGCCAGACGTTTGCCGTTACGCCCCGACAGCAGCGTCAGGAAAGTGCGCCAGGTCATACGTTTATTGGGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc                                                                                                                                                                                                                         <  1:583380/229‑1 (MQ=255)
   aaaTACCATCAGCCGGTCGTTTTCCGTTACGCACCGGCAGCTGGGTCAGCAAAGTGCCCGAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc                                                                                                                                                                                                                         <  1:340790/228‑1 (MQ=255)
        acttacaccAGGCTTTTGCCGGTTCGCACCGACGGCGGCGTGAGCAAAGTGCGTCGTGTCATGCGGTTATTGGGGATCTGGTAGAGGGTACACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTATTTGGGCTTGCGGTAAAAGTGGAATTTCCCGGAGAATTTTTTCGGTTACGAGGTGATCTCCATTTTACCGTGATTGATATGCAGGCTCT‑GCGTCGCCtctt                                                                                                                                                                                                                    <  2:521498/222‑1 (MQ=255)
         cATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTCT‑GCGTCGTCtctt                                                                                                                                                                                                                    >  1:521498/1‑228 (MQ=255)
           tCAGCCAGACTTTGGCCGTTGCGCACCGAAAGGAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGGGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCCCCGTGATTGATATGCAGGCTCT‑GCGTc                                                                                                                                                                                                                           <  2:700894/219‑1 (MQ=255)
           tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGCTCTGGTAGAGGGAAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGCGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTc                                                                                                                                                                                                                           >  1:700895/1‑219 (MQ=255)
           tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTCCATTTCACCGTGATTGATATTCAGGCTCT‑GAGTCGGCTCTTCTa                                                                                                                                                                                                                 >  2:736092/1‑229 (MQ=255)
                   aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGCCGAGGTGATCTGCATTTCACCGTGATTGATTTCCAGGCTTT‑GCGTCGCCTCTTCTACTTTCCAc                                                                                                                                                                                                         >  1:750853/1‑229 (MQ=255)
                   aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGGGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GGGTCGCGTCTTCTACTTTCCa                                                                                                                                                                                                          >  1:729266/1‑228 (MQ=255)
                    cGTTTGCCGTTTCGCACCGACAGCAGCGTCAGCAAAGTGCGACAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACg                                                                                                                                                                                                        <  1:437614/229‑1 (MQ=255)
                         gCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGCATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGTGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTc                                                                                                                                                                                                    >  1:246311/1‑228 (MQ=255)
                            gtttcgctgcGACAGCGGGGTTAGGAAAGTGGGCCGGGTTATCGGTTTAGTGCGGATTTGGTAGAGGGTAAAAGGCTGATA‑TTTTGTGCTGGCGCGGTCGAATTTGTTTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCg                                                                                                                                                                                                <  2:724268/220‑1 (MQ=255)
                             ttACGCACCGACAGCAGTGTCAGCAAAGGGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑GTTTTTGCTAGCGCGGTCGAATTTGGCTTTGTGCTTGCGGTAAAAGTGGAAGTACCAGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCg                                                                                                                                                                                                <  1:212677/228‑1 (MQ=255)
                               aCGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGGAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGTTGACGAGGTGATTTGCATTTCACCGTGATTGATATGCAGG‑TCTGGCGCGGCCTCTTCTACTTTCCCCCGTTCTCCGTa                                                                                                                                                                                              >  2:501885/1‑228 (MQ=255)
                                        gagcagaGGCAGCAAAGTGCGCCAGGTCTTACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTTATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGATAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTccaccac                                                                                                                                                                                     <  1:594566/227‑1 (MQ=255)
                                                      aagggggcccagTCATACGTTTATTGCGGCTCTGGTAGAGGGTAAAGAGCTGATA‑TTTTTTGCTGGCTCGGTCAAATTTGTCGTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGaa                                                                                                                                                                         <  2:729265/215‑1 (MQ=255)
                                                              cAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTTT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCAACCCCCATCCGCAGGAAGagtccgta                                                                                                                                                                >  1:145113/1‑220 (MQ=255)
                                                              cAGGGCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCATGCGGGAAAAGTGGAAGTACCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTTGTATGCAGGCTCT‑GCGTCGCCTCGTCTACTTTCCACGGGTCGCCGTAGTCACCCGGCATACGCCGGAAGAA‑Gtagga                                                                                                                                                               >  2:107389/1‑223 (MQ=255)
                                                                 gtctgtcGTTTATTGCGGATCTGGTAGAGGGTAAACAGGTGATT‑TTTTTTGCTGGCCCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCt                                                                                                                                                          <  1:371568/223‑1 (MQ=255)
                                                                     tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCCCTTCTACTTTCCCCGGTTCGCCGTCCCCCCCCACCATCC‑CCGGGAGATCGTCGTAATcccttg                                                                                                                                                       >  2:145965/1‑224 (MQ=255)
                                                                     tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGAAAAAT‑GTCGTAATCCtttg                                                                                                                                                       >  2:148457/1‑228 (MQ=255)
                                                                     tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTGGTCTTTTTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTCCTTGATAATCAGGCTCT‑GCGGCGCCTCTTCTACTTTCCACGTTTCGCCGTACACCACAACCACCCCCAGGAAGAT‑GTCGTAATCCTCTGc                                                                                                                                                      >  2:178566/1‑229 (MQ=255)
                                                                      gtttttgtgggggagttGGTAGAGGGTAAACAGTTGATA‑GTGTTTTCTGGCGCGGGCGAATTTGTCGTTGTGGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTGTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGcc                                                                                                                                                     <  2:545935/213‑1 (MQ=255)
                                                                           tATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTTGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCCCGGTTCGCGGTACTCCACCACCATCCGCCGGACGCT‑GTCGTAATCCTGGGCCGCttt                                                                                                                                                >  2:159170/1‑229 (MQ=255)
                                                                            ttgtgggATTTGGGGGAGGGTAAACAGGTGATA‑TTTTTTGCTGGCGGGGGCGAATTTGTCTTTGGGGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCttt                                                                                                                                                <  2:246311/223‑1 (MQ=255)
                                                                            aTTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGTAAGAT‑TGCGTAATCCtgtcactcttt                                                                                                                                                >  1:635728/1‑220 (MQ=255)
                                                                            aTTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGGAAGAT‑GTCGTAATCCTTTGCCGCttt                                                                                                                                                >  1:196241/1‑228 (MQ=255)
                                                                                cGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGtt                                                                                                                                           >  1:487327/1‑229 (MQ=255)
                                                                                     cTGGTTGGGGGTAAACAGCGGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa                                                                                                                                                                       <  2:498706/197‑1 (MQ=255)
                                                                                     cTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAgc                                                                                                                                                                       >  1:498706/1‑196 (MQ=255)
                                                                                      gttttgagGGTATAGAGGTGATT‑TTTTTGGGTGTGGCGGGTGAATTTGTTTTTGTGCTTGGGGGAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCTCCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTAt                                                                                                                                     <  2:294614/224‑1 (MQ=255)
                                                                                              ggTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaac                                                                                                                             >  1:443908/1‑228 (MQ=255)
                                                                                               gTAAACAGGTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGATTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa                                                                                                                             <  1:487519/228‑1 (MQ=255)
                                                                                                taaatgggtGATA‑TCTTGTTCTGGCGGGGTCGAATTTGTCTTTGTGCTTGCGGTTAAAGTGGAAGTACGCGGAGAAGTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTTGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca                                                                                                                           <  1:315697/221‑1 (MQ=255)
                                                                                                  aaCAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCCCTTTTCCTTTCCCCGGTTCGCCGTACTCAACCCCCACCCCCAGAGAATT‑GTCGCAACCCGTTGCCCCTCTCAATCCGGATTCCAACAAaaac                                                                                                                          >  2:70853/1‑228 (MQ=255)
                                                                                                  aaCAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGGAAAAGTGGAAGGACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACTATCCGCAGGAAGAT‑GTCGGAATCCTGTGCCGCTTCCATTTCGGTATCGcacaacacc                                                                                                                          >  2:175918/1‑224 (MQ=255)
                                                                                                       cTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAAAACCCttt                                                                                                                     >  1:333090/1‑228 (MQ=255)
                                                                                                        tGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGCT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATGGAAAAAAACCTCTTTg                                                                                                                    >  2:521149/1‑228 (MQ=255)
                                                                                                        ctgtttttttttGCTGGCGGGGTCGAATTTGTTTTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCttt                                                                                                                     <  2:750852/222‑1 (MQ=255)
                                                                                                              ttttttGGTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGc                                                                                                              <  1:711607/229‑1 (MQ=255)
                                                                                                                    ggtGGCGGGGTGGATTTGGTTTTTGGTGTTTCGGTAAAAGTGGAAGTTCCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc                                                                                                        <  2:117411/227‑1 (MQ=255)
                                                                                                                    ggtGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc                                                                                                        <  1:148457/227‑1 (MQ=255)
                                                                                                                     cTGTCGCGGTGGATTTTGTCGTTGTGGTTGCGTTAATAGTGTAAGTACCCTGAGAAGTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGccc                                                                                                       <  2:145113/229‑1 (MQ=255)
                                                                                                                     cTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTGCGCCGTACTCCACCACCATCCGCAGGAGGAT‑GTCGTAATCCTGTGCCGCTTTGAGTTCGGAATCGAACAAACACACTTTGAAACCCCATGcc                                                                                                        >  1:660337/1‑228 (MQ=255)
                                                                                                                      tGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCa                                                                                                                                                                                                          <  2:546014/130‑1 (MQ=255)
                                                                                                                      tGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCa                                                                                                                                                                                                          >  1:546014/1‑130 (MQ=255)
                                                                                                                        gcgcGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca                                                                                                                           >  1:583746/1‑206 (MQ=255)
                                                                                                                        gcgcGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca                                                                                                                           <  2:583745/206‑1 (MQ=255)
                                                                                                                                   ttttTCTTTGTTGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTg                                                                                          <  1:521149/228‑1 (MQ=255)
                                                                                                                                    ttGTCGTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGATGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTgg                                                                                         <  1:469285/228‑1 (MQ=255)
                                                                                                                                     tttttttGTGTTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTGTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt                                                                                       <  2:595211/225‑1 (MQ=255)
                                                                                                                                      gttcttGTTCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCGCCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGGTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAAGCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt                                                                                       <  1:736093/224‑1 (MQ=255)
                                                                                                                                      gTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt                                                                                       <  1:152226/228‑1 (MQ=255)
                                                                                                                                      gTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt                                                                                       <  1:427261/228‑1 (MQ=255)
                                                                                                                                        cTTTGTGCTTGCGGTAAAAGTGGATGTACCCGGAGAATTTTTTCGGTGACGGGGTGATCTTCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGc                                                                                     <  1:510526/228‑1 (MQ=255)
                                                                                                                                                  gctgTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACGCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTg                                                                          <  1:175918/226‑1 (MQ=255)
                                                                                                                                                       taacgttgAAGTTCCCTGGGAATTTTGTGGGGGACGGTGTGATCTTCTTTTCACCGTGTTTGATCTGGAGGTTTT‑GCTTCGCCTCTTCGACGTTCCACGGTTCGCAGTACTCCACCACCATCCGGAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCGTTGAAACGCCATGCCCAGGTAAAGATCTGGTTGCCAATGATATTGCGttt                                                                     <  2:635727/222‑1 (MQ=255)
                                                                                                                                                       aaaaGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCAACATCCGCAGGACGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGACCAAACACTCTTTGAAACGCCATGCCCAGGTAAAAACACGGTTGCCAAAGAAATTGCGttt                                                                     >  2:93004/1‑229 (MQ=255)
                                                                                                                                                             ggAAGTACCCGGAGAATTTTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGaa                                                               <  1:501885/229‑1 (MQ=255)
                                                                                                                                                                 gTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTTATTGGTATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAgg                                                           <  1:504764/229‑1 (MQ=255)
                                                                                                                                                                  tgcccGGAAGATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAggc                                                          <  1:486715/227‑1 (MQ=255)
                                                                                                                                                                    cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAACGACCTGGTTCCCAATGACATTGCGTTTCTAGAACAggcgg                                                        >  1:727312/1‑229 (MQ=255)
                                                                                                                                                                               ttttCGGTTACGAGGTGATCTGCATTTCCCCGTGATTGATAGGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACgg                                             <  1:145965/229‑1 (MQ=255)
                                                                                                                                                                                      tGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATTCCCAGGTAAAGACCTgg                                                                                         >  1:500272/1‑178 (MQ=255)
                                                                                                                                                                                      tGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGAtt                                        <  1:380060/227‑1 (MQ=255)
                                                                                                                                                                                                 tttGCTTTTCCCCGTGTTTGCTCTCCGGGCTCT‑CCGTGCCCTCTTCTCCCTTCCACGGTTCGCCGTACTCCACCCCCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCgg                           <  2:333090/227‑1 (MQ=255)
                                                                                                                                                                                                          cACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACAATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGAAAAGACCTGGATGCCAATGTTATTGGGTTTGGAGAACAGACGGCGTGCATACGGCGAGTTGGGAAACAGCTGCAAGCATGc                  >  1:268389/1‑229 (MQ=255)
                                                                                                                                                                                                             cGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCTCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACTAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTCCCAATGATATTGCGTTTGTAGTACAGTCGGCGTGACTACGTCGATTTGGGATACAGCGGCCAGCTTGACgg               >  1:225887/1‑229 (MQ=255)
                                                                                                                                                                                                               tgattgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAAAAGGCGGCGTGAAAACGGCGCATTGGGATCCAGCGGCAAGCTTGCCgg               >  1:223483/1‑227 (MQ=255)
                                                                                                                                                                                                               tgattgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGACGACCAGGCGGCGGGAATACGGCCAATTTGGTAACACCGTCAAGCTTGGCGGtt             >  2:233418/1‑229 (MQ=255)
                                                                                                                                                                                                                 attgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGACGCT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGCGGGGAATACGGGGGTTTGGGATACAGCGGCAAGATTTCCgggggg           >  2:502524/1‑225 (MQ=255)
                                                                                                                                                                                                                    gatATGCCGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGaa        <  1:233418/229‑1 (MQ=255)
                                                                                                                                                                                                                          gaGGTTCT‑GCGTCCCGTCTTCTTACTGCCAGGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCGGGGCCGCTTTCAGTTCGGTATCGAACAAACTCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACt  <  2:220310/228‑1 (MQ=255)
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                  
CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACT  >  NC_000913/2132566‑2133011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A