Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A29 F31 I1 R1 9 193.0 4079480 90.0% 3671532 259.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,318,095 C→G L594F (TTG→TTC)  rcsC ← hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,318,0950CG98.2% 605.7 / NA 171L594F (TTG→TTC) rcsChybrid sensory kinase in two‑component regulatory system with RcsB and YojN
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (82/85);  minor base T (0/3);  total (83/88)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 171 total aligned reads displayed.

GGTAAACTGGCTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGA  >  NC_000913/2317822‑2318366
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                
ggTAACCTGTCTGCCCCTTCCCTGTTCTGAAACTACCGAGATATACCCGGTCATCATGCTTATCAGTTTTTCACAAATCGACAGCCCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACCCGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGaa                                                                                                                                                                                                                                                                                <  2:984098/276‑1 (MQ=255)
ggTAACCTGGCTGCCCATTCCCGGTTCTGAATCTACCGAGTTATCGCCGTCCATCATGCTAATCAGTTTTGCCCAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGaa                                                                                                                                                                                                                                                                                <  2:629107/276‑1 (MQ=255)
 gTAAACTGGCTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGaa                                                                                                                                                                                                                                                                                <  1:370623/275‑1 (MQ=255)
 gTAAACTACCTGCCCCTGCCCCGTTCTGAAACCACCGAGACATTGACGTCCATCATGCTGATCAGTTTTTAACGGATCGCCAGACCCAGACCGTTCCCCTGGAAAATACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGaa                                                                                                                                                                                                                                                                                <  4:888443/275‑1 (MQ=255)
          cTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAACTTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTCCTTTCGCCGGTATCCCCACGCCGGTATCGCGATCACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAAACGGTTTga                                                                                                                                                                                                                                                                       >  1:856720/1‑275 (MQ=255)
          cTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTCTGGCGGTAATGAACAGGTTGgaa                                                                                                                                                                                                                                                                      >  2:888443/1‑275 (MQ=255)
          cTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGgag                                                                                                                                                                                                                                                                      >  2:423341/1‑276 (MQ=255)
            gCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGgag                                                                                                                                                                                                                                                                      >  1:197227/1‑274 (MQ=255)
                   accGGTTCTGAACCTACCCAGATACCGCCGACCATCATTCTGATCAGGTTTTCCCCAACCGCCAGACCCCGACCGGTCCCCTGGAAATTACCCTG‑TCCGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACctgc                                                                                                                                                                                                                                                             <  4:258414/275‑1 (MQ=255)
                       gTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGt                                                                                                                                                                                                                                                          >  1:137652/1‑275 (MQ=255)
                                     gagaTATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACAGGCAAAACTATACAGCCGGTAGCGGAGAACTTTTAGGCGTTACTGAACAGGTTGGGGATGACCTGATGTAAATGCAGAGGGt                                                                                                                                                                                                                                             >  1:472972/1‑274 (MQ=255)
                                       gaTATCGCCGTCCATCATTCTGATCAGTTTTTCACAAATCGCCAGACCCAGGCCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGc                                                                                                                                                                                                                                          <  1:391818/275‑1 (MQ=255)
                                             tcaaccaaacatGCTGATCGGTGTTACACGAATCGCCAGACCCAGACCGGTCCCATGGAAATTACGATG‑TACGGCCGTTCCGAGCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGGGAGATAAGCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGCTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTaa                                                                                                                                                                                                                                   <  4:502024/267‑1 (MQ=255)
                                             gCCGACCATCATGCTGATCAGTTTTTCACAAATCGCCCGACCCAGACCGATCCCCTGGAAATTACGCTG‑TACGCCCGTTCCAACCTGGAAGAAGGGATCAAACAAGCGAGCCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTa                                                                                                                                                                                                                                    <  1:659571/275‑1 (MQ=255)
                                                 tCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACTTGCTGTAAATGCATCGGGTCGCCATTTAAGGc                                                                                                                                                                                                                                >  1:784182/1‑275 (MQ=255)
                                                 tCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATAAAGCCGGTATCGGTGAATGTTATGGCGTTACTGAACAGGTTGGAGATGAACTGCTGTAAACGCATCGGGTCGCCATTTAAgggc                                                                                                                                                                                                                               >  2:410549/1‑274 (MQ=255)
                                                   catcatGCTGATCATGTTTTCACAAATCCGCAAAGCCGGACCGGGCCCCGTGAAATTCCGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCGGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCa                                                                                                                                                                                                                              <  3:68826/275‑1 (MQ=255)
                                                          cTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGcaca                                                                                                                                                                                                                      <  2:856936/276‑1 (MQ=255)
                                                                 gttggttccaACTCGCCCTACCCAGCCCGGGCCCACAGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCAACACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGtt                                                                                                                                                                                                               <  4:830575/268‑1 (MQ=255)
                                                                    tttCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGGCGCCATTTAAGGCCACTGGCACATCCGGTTCa                                                                                                                                                                                                             >  1:874900/1‑275 (MQ=255)
                                                                        acaAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATc                                                                                                                                                                                                                    <  1:700743/264‑1 (MQ=255)
                                                                         caACTCGCCAACCCCAGACCGGTCCCCGGGAAATTACGCGG‑TACGCCCGTTCCGACCTGGAAAAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  4:506169/276‑1 (MQ=255)
                                                                          gaatccacagcaccagaccCGTCCCCAGGAAATT‑CGCCGTTACGCCCTATCCGACATGGAAGAAGTGATCAAACAAGCGAACCACCTCTTACGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGGGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  4:108376/263‑1 (MQ=255)
                                                                          caaTCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  1:722248/274‑1 (MQ=255)
                                                                          aaaCCGCCCAACCCAGACCGGCCCCCGAGAAAGTACGCAG‑TACCCCCGTTCCGACCTGGAAGAAGGGATAAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGAGAGAGAGATAAGCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGTGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  3:472970/275‑1 (MQ=255)
                                                                           aaTCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCATCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGAc                                                                                                                                                                                                                                                                 <  1:754570/216‑1 (MQ=255)
                                                                                ccagacccagacCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                 <  3:144171/275‑1 (MQ=255)
                                                                                 cagacccatgccGATCCCCGTGAAAGGACGGCG‑GACGCCCGTTCCTAACTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTGCGCCGGTGTCCCCACGCCGGTATCGCGAACACGGAGAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                 <  3:770879/274‑1 (MQ=255)
                                                                                    acccagaccGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCTCGAACACGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCGGTAAACGCACCGGGTCGGCATTTAAGGCCCCTGGCACACCCGTCTCAATAAAGCAGTACAAGc                                                                                                                                                                                             >  3:72835/1‑275 (MQ=255)
                                                                                     cccagcccgagtcccTGGAAATTACGCTG‑TACGCCCCTTCCGACCGTGAACAAGGGATCAAACAAGCGAACCACGTCTATCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCt                                                                                                                                                                                           <  4:1031711/264‑1 (MQ=255)
                                                                                            cGGGCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCt                                                                                                                                                                                    <  2:169458/276‑1 (MQ=255)
                                                                                              gTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTACACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCtt                                                                                                                                                                                   >  1:645569/1‑275 (MQ=255)
                                                                                               tCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGGGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAAAAGCCTAACTGCTTg                                                                                                                                                                                  >  1:682085/1‑275 (MQ=255)
                                                                                                  ccTGGAAGATACGCCG‑GACGCCCGATCCGACCTGGAAGAAGGGATCAAAAAAACGCACCACTACTTTCTCCGGGATCCCCACGCCGGTATCGCGAACACGGTTAGAGAGATAATCGCCATCCGCGCGAAAATGCAAAACTATACAGACGGTATCGGTGAATTGTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGt                                                                                                                                                                               <  3:405792/275‑1 (MQ=255)
                                                                                                        aaTTACGCTG‑TACGCCAGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  2:703753/276‑1 (MQ=255)
                                                                                                         agtACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  1:315252/273‑1 (MQ=255)
                                                                                                          attatccaggacacccGTTCCAACCTGGAATAAGGGATACAACAAGCTCACCACTTCTTTCGCCCGTATCCCCACGCCGGTATCGCGAACACGGATAGAGGGATAATCGCCATCCGGTCGGACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACTCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  3:316993/262‑1 (MQ=255)
                                                                                                               cgg‑TACGCCCGTTCCGACCTGAAAGAAGGGAGCAAAAAAGCTCACCTCTTCTTTCGCCGGTATCCCCCCGCCGGTATCGCTAAAACGGATAGAGGGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTaa                                                                                                                                                                 <  4:783742/274‑1 (MQ=255)
                                                                                                                   tACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTTCTTGCGTACCACCAGCGGTAAATa                                                                                                                                                              >  2:281051/1‑276 (MQ=255)
                                                                                                                          gtgccGAACTTGAAGAAGTGATCAAACAAGCGCACCACTTCTTTCGCCCGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGTAAAACTATACAGCCGGTATCTGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCGGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCg                                                                                                                                                       <  2:1014834/273‑1 (MQ=255)
                                                                                                                           ttCCGGCCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACAAGCGGTAAATAGTTGGCg                                                                                                                                                       >  2:489203/1‑275 (MQ=255)
                                                                                                                           ttCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGATTTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTCCAAGCCTACTTGATTGCGTACCACCAGCGGGAAATAGTTGGCg                                                                                                                                                       >  2:902419/1‑275 (MQ=255)
                                                                                                                             ccGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTCAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGt                                                                                                                                                     >  4:724432/1‑275 (MQ=255)
                                                                                                                                aCCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACGGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTACTTGCATACCCCCAGCGGTACATAGTTGGCGGTGAt                                                                                                                                                  >  4:297479/1‑275 (MQ=255)
                                                                                                                                 ccTGGAAGAAGTGATCCAACAAGCGCACCTCTTCTCTCGCCGGTATCCCCACGCCGCTATCGCGAACGCGAATAGAGAGATAATCGCCATCCGCACGAACATGCAAAACTATACATCCGTTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGAtg                                                                                                                                                 <  2:182978/275‑1 (MQ=255)
                                                                                                                                  cTGGAAGAAGTGTTCAAACCAGCGCACCCCTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGAtgtg                                                                                                                                               <  2:1002415/276‑1 (MQ=255)
                                                                                                                                        gaagGGAACGAACAAGCGCACCACTTCGTTCGCCGGGATCCCCACGCCGGTATCGCTAACACGGACAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTTTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTtca                                                                                                                                          <  1:25409/275‑1 (MQ=255)
                                                                                                                                          agGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGAtgtgtgtcact                                                                                                                                        >  1:35741/1‑268 (MQ=255)
                                                                                                                                              aTCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACt                                                                                                                                     >  1:56394/1‑274 (MQ=255)
                                                                                                                                               tCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACAAGCGGTAAATAGTTGGCGGTGATGTGGttaacgcctt                                                                                                                                    >  1:820861/1‑266 (MQ=255)
                                                                                                                                               tCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCAAATCCGGTTCAATAAAGCAGTACAAGCCTAAATGCTTGCGTACCACCCCCGGGAAATAGTTGGCGGGGAGGTGGTTTACCACTTc                                                                                                                                   >  3:503941/1‑275 (MQ=255)
                                                                                                                                                      aGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGt                                                                                                                            <  1:503943/275‑1 (MQ=255)
                                                                                                                                                      aGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACGGCTTGCGTACCACCCGCGGTAAATATTTGGCGGTGATGTGGGTCATCACTTCACGCGGt                                                                                                                            >  1:887069/1‑275 (MQ=255)
                                                                                                                                                        cgcACCACTTCTTTCGCCGGTATCCCCACGCCGGTCTCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACCGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAACCGCCTCGGGTCGCCATTTAAGGCAACTTGCACATCGGGTACACTCACGCAGTACTAGCCTACCTTCTTTCGTACCACCACCTGTAAATCGTTGGCGTTGATGTGGTTTATCCCTACCCGCGGTg                                                                                                                           >  3:922640/1‑274 (MQ=255)
                                                                                                                                                        cgcACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTg                                                                                                                           >  1:464233/1‑274 (MQ=255)
                                                                                                                                                                      cgacGGTAACCCCACGCCGATATGGCGAACACGGATAGAGAGGTAATCGCCATCCGCGCGAAGATGCAAAGCTATACAGCCGGTATCGGTGAATTTTATGGCGTTAATGAACAGGTTGAAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                            <  1:119916/272‑1 (MQ=255)
                                                                                                                                                                      cGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                            <  3:464231/275‑1 (MQ=255)
                                                                                                                                                                       gCCGGTATCACCACGCCGGTATGGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                            <  1:925013/274‑1 (MQ=255)
                                                                                                                                                                           gTAGCCCCAAGCCGGTATCGCGAACACGGATAGAGAGATAAACGCCATCCGCGCAAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATc                                                                                                       <  3:556111/275‑1 (MQ=255)
                                                                                                                                                                            tATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCtt                                                                                                     >  2:322241/1‑276 (MQ=255)
                                                                                                                                                                               ccccACGCCGGTATCGCGAACCCGAATAGATGGATAATCGCCATCCGCGCTAACATGCAAACCTATACAGCCGGTATCGGTGATTTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTATAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACGAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCaa                                                                                                  <  4:489203/276‑1 (MQ=255)
                                                                                                                                                                                 ccccGCCGGAGTCCCGAACACGTATAGAGAGATAATCGCCATCCCCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAc                                                                                                 <  3:682083/272‑1 (MQ=255)
                                                                                                                                                                                 ccACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGAAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACCCACGCGGTTCGAGCttacaa                                                                                                 >  4:497083/1‑271 (MQ=255)
                                                                                                                                                                                     gacgatATCCCGAACACGGATAGAGGGAAAATCGACCACCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAGTTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGtt                                                                                             <  3:957353/270‑1 (MQ=255)
                                                                                                                                                                                          tATCGCGAACACGGATAGAGAGATAATCTCCATCTGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGACTTTTATGGCGTTACTGAACAGGTTGGAACTGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTCGCACATCCGGTTCAAGAAAGCAGTACAAACCTACCTACTTGCGTACCACAAGCGGCAAATAGTTGGCCGTGATGTGGTTCATCACTTCACGCGGTTAAAACTCACGCGGTTAGATCGTCTACtttacgagtt                                                                                       >  4:918129/1‑267 (MQ=255)
                                                                                                                                                                                          tATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCCATAAAGAAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGGGGTGATGTGGTTCATCACTTAACGCGGTGAAAAATCACTGGGTTCGATCGTCTAATGTTACGagt                                                                                       >  4:828074/1‑274 (MQ=255)
                                                                                                                                                                                          tATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTCCAAGCCTACCTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGACAACTCACGCGGTTAGATATCAAACGGTACCGAtt                                                                                       >  4:473568/1‑276 (MQ=255)
                                                                                                                                                                                          tATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGAtt                                                                                       <  2:158247/276‑1 (MQ=255)
                                                                                                                                                                                               cgAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGCTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGGTCGATCTTCAACTGTTCCGATTCAAt                                                                                   >  1:836821/1‑275 (MQ=255)
                                                                                                                                                                                                     ccgATAGAGAGATAATCGCCATCCTCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATTGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCgag                                                                            <  2:938685/274‑1 (MQ=255)
                                                                                                                                                                                                           gagagaTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTaccac                                                                                                                                                                          <  2:822572/176‑1 (MQ=255)
                                                                                                                                                                                                                aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTACGAGAAATCGAGaa                                                                  >  1:303629/1‑275 (MQ=255)
                                                                                                                                                                                                                aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGCATTGGTGAAATTTATAGCGTTACTGAACAGTTTGGAGAAGACCTGCTGTAAACGACTCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTACAATAAAGCAATATAAGCCTTACTGATTGCGTACCACCACCGGTACATAGCTTGCGGTGATGTGGTACTTCACTTCACGCGGGGATGACTCACGCGGTTCCATTTTGACTTATTCCGTTTCAAGTTTCGAGTAATCgtcaa                                                                  >  3:209910/1‑271 (MQ=255)
                                                                                                                                                                                                                  aaTCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAatat                                                               >  2:771318/1‑276 (MQ=255)
                                                                                                                                                                                                                  aaTCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTAACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAata                                                                >  1:417073/1‑275 (MQ=255)
                                                                                                                                                                                                                  aaTCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAAAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCGCGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAata                                                                >  3:241590/1‑275 (MQ=255)
                                                                                                                                                                                                                  aaTCCCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGAGATGTGGGTCATCACTTCCCGCGGTGATAACTCCTGAGGTTCGATCTTCCACTGTTCAGACTAAAGCTTCGAGGAATCGAGAatat                                                               >  4:245652/1‑276 (MQ=255)
                                                                                                                                                                                                                            cgccgtaaCATGAAAAACTATACAGCCGGTATCGATGAATTTTATGGCTTTACTGAACAGGTTTGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑Ta                                                      <  1:728905/268‑1 (MQ=255)
                                                                                                                                                                                                                            cgaccaaaaaagCAAAACTATACAGCCGGTATCGGTGAATTTTCTGGCGTTACTGAACAGGTTGGAGACGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑Taa                                                     <  4:173319/264‑1 (MQ=255)
                                                                                                                                                                                                                              cgcgAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAAtt                                                   <  2:242632/275‑1 (MQ=255)
                                                                                                                                                                                                                                          aacacttgcAGCCGGTATCGGTTAATTTTATTGCGTTACTTAACAGGTTGGAGATGACCTGCCGTAAACGCTACGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCGCCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGc                                      <  4:423341/268‑1 (MQ=255)
                                                                                                                                                                                                                                               ataCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTCGCGTACCCCCAGCGGTAAATAGTTGGCGGTGATTTGGTTCATCACTTCACGCGGTGAAAACTCACACGGTTCGATCTTCAACTGTTCCGATTCAATCTGCTAGCACGCGAGAATATCGCTGAGCATTTTTcaacacacgattcaa                                  >  4:356795/1‑266 (MQ=255)
                                                                                                                                                                                                                                               ataCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCGGTAAACTCATCGGGTCGCCATTTAAGGCCACTCGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTgg                                   <  3:197226/274‑1 (MQ=255)
                                                                                                                                                                                                                                                   aGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAagag                              <  3:137651/275‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCgg                                                                                                                             >  3:696325/1‑179 (MQ=255)
                                                                                                                                                                                                                                                        gTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCTCAAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGCGAAATCGAGACTATCCATGA‑TAATTTTCAACAACAGGCTGGATGATTTGGTc                        >  2:774705/1‑276 (MQ=255)
                                                                                                                                                                                                                                                        gTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCTATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGACTGGAAGAGTTTTTc                        >  2:543002/1‑276 (MQ=255)
                                                                                                                                                                                                                                                        gTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGGTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACTCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGTTTCAATCTCCGATACATAGAGAATATAGACGA‑TAATTTTCAACAACAGCCTGGAAGCGTTATTc                        >  4:610445/1‑276 (MQ=255)
                                                                                                                                                                                                                                                         tttCGGTGAATTTTATGGCTGTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCa                       <  2:497083/274‑1 (MQ=255)
                                                                                                                                                                                                                                                         tATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGaa                                                                                                                         <  1:696327/179‑1 (MQ=255)
                                                                                                                                                                                                                                                              gTGAATGTTATGGCGGTACTGAAAGGGTTGGAGATGACCCGCTGTAAACGCATCGGGTCGCAATTAAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGc                   <  3:599971/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aaTTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTAATTGCCGTc               >  2:667380/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                   ttttATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCTATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCa              >  2:798078/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                       aTGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTCCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTAAATATTCGAGAAATCGAGAATATCGCTGA‑TATTTCTCAACAACAGGTTGGAAGGGTTGTTCATGGCCGTCAcc            >  3:838538/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                             ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATc                                                                                                                                                                                                                    >  2:737935/1‑68 (MQ=255)
                                                                                                                                                                                                                                                                             ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCAcgcg                                                                                                               >  3:659183/1‑169 (MQ=255)
                                                                                                                                                                                                                                                                             ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTc                                                                               >  4:728735/1‑201 (MQ=255)
                                                                                                                                                                                                                                                                             ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGATGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCCGCAGATCg   >  2:682870/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                              tACTGAACAGGTTGGAGATGACCTGCTGTAACCGCATCGGGTCGCCATTTAAGCCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGa  <  2:560730/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aCTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGa  <  2:514845/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                
GGTAAACTGGCTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTG‑TACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGA‑TAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGA  >  NC_000913/2317822‑2318366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A