Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A19 F34 I1 R1 9 149.1 2973750 91.7% 2726928 262.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,318,095 C→G L594F (TTG→TTC)  rcsC ← hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,318,0950CG97.6% 450.5 / ‑4.4 126L594F (TTG→TTC) rcsChybrid sensory kinase in two‑component regulatory system with RcsB and YojN
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (66/57);  minor base T (2/1);  total (68/58)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

Only 100 of 126 total aligned reads displayed.

GTAAACTGGCTGCCCATTCCC‑GGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGAC  >  NC_000913/2317823‑2318367
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                
 tgaacctggtGCCCCTTCCCGGGTTCTGAATTTACCGAGAAATCGCCGTCCATCATGCTTATCAGTTTTTCACAAATCGCCAGACCCCGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGaa                                                                                                                                                                                                                                                                                <  3:438115/266‑1 (MQ=255)
         cTGCCCATTCCC‑GGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAACCGGTATCGGTGAATTTTATGGCGTTACTGAAACGGTTGga                                                                                                                                                                                                                                                                       >  3:58001/1‑275 (MQ=255)
         cTGCCCATTCCC‑GGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATACACAACTAAACAGCCGGTAGCGGTTAATTTTATGGCGTTACTGAACAGGTTggc                                                                                                                                                                                                                                                                       >  3:342356/1‑274 (MQ=255)
           gCCCATTCCC‑GGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCCGACCGGTCCCCTGGAAAATTACGCTGTACTCCCGTTCCGACCTGGAGGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATTCAAAACTATACAGCCGGTATCGTTGAATGTTATGCCGTTACTGAAAAGGTTGgag                                                                                                                                                                                                                                                                      >  1:804008/1‑275 (MQ=255)
           gCCCATTCCC‑GGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTTG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATAGCGTGACTTAACAGGTTggcg                                                                                                                                                                                                                                                                      >  1:475066/1‑272 (MQ=255)
                             aaTCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTCTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTAAGCTGTACGCACGTTCCGACATGGAAGAAGGGAACAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGTTAAAGCACTAATCGCCATCCGCGCGAACATCACAAACTATCCAACCGCGACAGGGGAATTTTATGGCGTTACGTAACAGGTTAGAGATGACATGCGGTAAACGc                                                                                                                                                                                                                                                    >  3:108212/1‑275 (MQ=255)
                                  aCCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGCTCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCCCGAACACGGATAGAGAGATAATCTCCATCCGCCCGAACATGCAAAACTACACAGCCGGTATCGGTAACTTTTTTGGCGATACTGAACAGGTTGAAGAGTACCTGCTGTAACGGAAACGGGTc                                                                                                                                                                                                                                            >  4:572560/1‑278 (MQ=255)
                                    cGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGt                                                                                                                                                                                                                                             <  1:337315/275‑1 (MQ=255)
                                       gaTATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCACTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATAGCCATACGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATGTTATGGCGTTACTGAACAGGGTGGTGATTACCTGCTGTAAACGCATCGGGTCgg                                                                                                                                                                                                                                          >  2:429673/1‑274 (MQ=255)
                                          atCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGATCCGACCTGGAAGAAGGGATCAAACAAGCGAACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTa                                                                                                                                                                                                                                    <  2:133440/278‑1 (MQ=255)
                                               cGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTACGACCTGGAAGAAGGGATCAAACAAGCGAACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAg                                                                                                                                                                                                                                  <  3:822599/275‑1 (MQ=255)
                                                gTCCCTCATGCGGATCAGTTTTTCCCAAATCGCCAGCCCCATACCGATCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCTGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCa                                                                                                                                                                                                                              <  2:537331/278‑1 (MQ=255)
                                                 tCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAACCGCATCGGGTCGCCATTTAAGGCCAc                                                                                                                                                                                                                             >  2:266464/1‑278 (MQ=255)
                                                 tCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGc                                                                                                                                                                                                                                >  1:204809/1‑275 (MQ=255)
                                                   cattatTCTGATCAGTTTTTCACAAAGCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACCCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCCCTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGTATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCa                                                                                                                                                                                                                              <  1:702177/275‑1 (MQ=255)
                                                             aTCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGACGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTAATGGACAGGTTGGAGATGAGCTGCGGTAAACGCATCGGGTCTGCATTTAAGTGCAGTGGcaccacgtg                                                                                                                                                                                                                 >  4:32214/1‑272 (MQ=255)
                                                             aTCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCgg                                                                                                                                                                                                                 <  2:407367/278‑1 (MQ=255)
                                                             aTCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGAGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGGTTGAGATGACCTGCTGTAAAAGACTAGGGTCTCTATTTACGGCCACTGGCACATCCgg                                                                                                                                                                                                                 >  2:344458/1‑278 (MQ=255)
                                                             aTCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGACCGTCTCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGCTAGAGAGATAATCACCATCCGCGCGAACATGCAAACCTATACAGACGGTATCGGTGAATTTTATGCCGTTACTGAACAGGTTGGAAATGACCGTATGTAACCGCATAGGTTCGACACTTACTGTCACTgcaaactccga                                                                                                                                                                                                                 >  4:498273/1‑268 (MQ=255)
                                                                    tttCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCTGGTTCa                                                                                                                                                                                                             >  1:356338/1‑275 (MQ=255)
                                                                       cccaAACCGCCAGACCCCGACCGGTCCCCGCG‑AAAGTAAGCTGTACGCCCGTTCCGACCTGGAAGACGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTAGCCCCACGCCGTGATCGCGAACACGGAGAGGGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  4:212902/276‑1 (MQ=255)
                                                                       cacaTATCTCCAGACCCGGCCCCGTCCCCTCG‑AAAGTACGCAGCACGCCCGTTCCGACCGGGAAGAAGGGATCAAACAAGCGCACCACCTCTGTCGCCGGTCTCCCCAAGCCGCTATCGCGAACACGGATAGAGATATAAGCGCCATCCGCGCGAACATGCAAAACTGTACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAAATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACGTCCGGTTCAATAAAg                                                                                                                                                                                                       <  4:213428/278‑1 (MQ=255)
                                                                       cacaAACCGCCAGACCCAGACCGGTCACCTGA‑AAATTACGCTGACCGCCCGGTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  2:32214/278‑1 (MQ=255)
                                                                          aaaaCGCCAGACCCAGACCGGTCCCCTGG‑CAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  1:273108/275‑1 (MQ=255)
                                                                            aTCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAAAATGCAAAACTAAACAGCCGGTAACGGTGAATTTTATGGCGTTATTGAACAGGTTGGAGATTAACTGCTGTAACCGTATTGTGTCGCAATTTAAGGCAACTGGCACATCCGGTGCAACAAAGCa                                                                                                                                                                                                     >  3:114337/1‑275 (MQ=255)
                                                                             tCGCCGGACCCCGACCGGGCACCTGG‑AAATTACGACGTAAGCCCGTTCCGACCTGTAAGAAGGGATCAAACAAGCGAACCACTGCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTTAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                 <  4:159552/278‑1 (MQ=255)
                                                                                 cagacccagaccGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGAATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                 <  1:462883/274‑1 (MQ=255)
                                                                                             cggccacTGG‑AAATTACGCAGTACGCCCGTTCCGACCTGGAAGAAGCGATCAAACAAGCGCACCACTTCTTTCGCCGGTATACCCACGCCGGTATCGCGAACACGGATAGAGAAATAATCGCCAACCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCt                                                                                                                                                                                    <  3:770302/269‑1 (MQ=255)
                                                                                              gTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCGTTTAAGGCCACTGGCACACCCGGTTCAATAAAGCAGTACAACCCAAACTGCtt                                                                                                                                                                                   >  3:849087/1‑275 (MQ=255)
                                                                                              gTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCCATAAAGCCGTACAAGCCCAACTGCtt                                                                                                                                                                                   >  1:454205/1‑275 (MQ=255)
                                                                                              gTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTATAAGCCTAACTGCtt                                                                                                                                                                                   >  1:740704/1‑275 (MQ=255)
                                                                                              gTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCg                                                                                                                                                                                >  4:209776/1‑278 (MQ=255)
                                                                                              gTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGCAGTTCATGAACAGGCTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACACCCGGTTCAATAAAGCAGTACAAGCCTAACCGCTTGCg                                                                                                                                                                                >  2:306622/1‑278 (MQ=255)
                                                                                               tCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       >  1:783109/1‑254 (MQ=255)
                                                                                               tCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  3:783107/254‑1 (MQ=255)
                                                                                               tCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGATGTAAACGCATAGGGTCGCCATTTAAGGCCACTGGCCACTCCGGTTCAATAAAGCAGTACAAACCTAACTGCTTGCgc                                                                                                                                                                               >  4:473338/1‑277 (MQ=255)
                                                                                                       gaaacaccGCTGTACCCCGCTTCAGACCTGACAGAAGGGCTCAACCAACCGAACCACTTCTTCCGCCGGTACCGCCACGCGGGAATCACGAACACGGATAGAGAGATAATCGCCATCCCCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  4:364995/271‑1 (MQ=255)
                                                                                                       aaaactaccctacaCGCCCGTCCCGGCCGGTAAGAAAGGAACACACACGCGCCCCACTTCTATCCCCGGTATCCCCCCGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTaccac                                                                                                                                                                          <  2:103722/263‑1 (MQ=255)
                                                                                                         acttccccTGCACACCCGTTCCGACCATGAAGAAGGGTCCAAACAAGCGCACCCCTGCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGTTAGAGAGATAATCGCCAGCCGCGCGAACATGAAAAACTATACAGCCGGTATCGTTGAATTTTATGGCGTTACTGAACAGGTTTGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTaccac                                                                                                                                                                          <  3:804006/267‑1 (MQ=255)
                                                                                                          tttACGCTGTGCGCCAGTTACGACCTGGAAGAAAGGACCAAACAACCGCACCACTCCGTTCGCCGCTAACCCCACGCCGGTAACGCGAACACGGAGAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAGCGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  1:360472/274‑1 (MQ=255)
                                                                                                          aTTCCGCTGTACCCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  1:841362/275‑1 (MQ=255)
                                                                                                            tACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCCATTAAGGCCACTGGCACATCCGGTTCAATAAAGAAGTAAAAGCCTACATGCTTGCGttcacccata                                                                                                                                                                      >  1:407533/1‑266 (MQ=255)
                                                                                                            tACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACATGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTCCTTGCGTACCACCAGc                                                                                                                                                                      >  1:756334/1‑275 (MQ=255)
                                                                                                              cccggaaCGCCCGTCCCGACCTGGAAGACGGGATCAAACAAACGCACCACATCTTTCGCCGGTATCCCCACGCCGGTATCGGGAACACGGATAGAGAGATAATCGACATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTaa                                                                                                                                                                 <  4:110341/272‑1 (MQ=255)
                                                                                                              cGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCgg                                                                                                                                                                    >  3:187748/1‑275 (MQ=255)
                                                                                                              agCTGTACTCCCGTTCATACCTGGACGAAGGGATCAAACCAGCTACCCACTTCTTTCGCTGGTATCCCCACGCCAGTATCGCGAACACGGATAGAGGGATAATCGCGAGCGGCGAGAACATGCAAAACTATACGGCTGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGCCCTGCTATAAAAGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCg                                                                                                                                                                     <  3:436338/273‑1 (MQ=255)
                                                                                                                  gTACGCCCGTTCCGATCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCCTGCGTACCACCAGCGGTAAATAg                                                                                                                                                             >  2:273210/1‑278 (MQ=255)
                                                                                                                   tACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACaa                                                                                                                                                                                               >  3:43414/1‑243 (MQ=255)
                                                                                                                         cgtacccacagggAAGAAGGAATCAACCAAGCGCACTCCTTCTTACACCGGTATCCCCACGCCGGTATAGCAAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCg                                                                                                                                                       <  2:58309/266‑1 (MQ=255)
                                                                                                                           ttCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTa                                                                                                                                                                                                  >  2:345606/1‑232 (MQ=255)
                                                                                                                               gACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGa                                                                                                                                                   <  1:187748/275‑1 (MQ=255)
                                                                                                                                aCCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCa                                                                                                                                                                                                     >  1:46001/1‑224 (MQ=255)
                                                                                                                                  cgtgaagaaGGGAGAAAACAAACGCACCACTTCTTTAGCCAGTATCCCCACGCCGGTATCGCGAACACGGATAGAGATATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTGAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGAtg                                                                                                                                                 <  3:740702/271‑1 (MQ=255)
                                                                                                                                               tCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGAGGTGATGTGGTTCATCACtt                                                                                                                                    >  3:804813/1‑274 (MQ=255)
                                                                                                                                                      aGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGt                                                                                                                            >  3:32693/1‑275 (MQ=255)
                                                                                                                                                        cgcACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGATTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACGTCACGCGGTg                                                                                                                           >  1:564510/1‑274 (MQ=255)
                                                                                                                                                             cacTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGca                                                                                                                                                                                                                        >  1:612241/1‑176 (MQ=255)
                                                                                                                                                                 tcttTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATc                                                                                                                                                                                                                    <  3:612239/176‑1 (MQ=255)
                                                                                                                                                                      cGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                            <  1:149827/275‑1 (MQ=255)
                                                                                                                                                                       gCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGATCAGGTTGGAGATGACCTGCTGTAAACGCATCGAGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAACGCAGTAAAAGCCTAAATGCTTGCGTACCACCACCGTTAAATAGTTGGCGGTGATGCGGCTCATCACTTACCGCGGTGAAAACTCACGCGGGTc                                                                                                           >  3:564377/1‑275 (MQ=255)
                                                                                                                                                                          ggTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCACCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCCTCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCTTCACTGATTGCATACCACCAGCGGTAAATAGTTGGCGGGGATGTGGTTCATCATTTCACGCGGTGAGAACTCCCGCGGTTCGctct                                                                                                      >  2:121581/1‑277 (MQ=255)
                                                                                                                                                                           gTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATc                                                                                                       <  1:567196/275‑1 (MQ=255)
                                                                                                                                                                              cccccACGCAGGTTTCGCGAACCGGGTTAGAGGGGTAATTGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTTTCGGTGAATTTTATGGCGTTCCTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCaa                                                                                                  <  4:277286/276‑1 (MQ=255)
                                                                                                                                                                                ccccCGCCGGTATAGAGAACACGGATAGAGGGATAATCGCCATGCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTAGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCaa                                                                                                  <  3:731620/275‑1 (MQ=255)
                                                                                                                                                                                cccAAGCCGTGATGGCGAACGCGGATAGAGAGATAATCACCACCCGCGGGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGTGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCaa                                                                                                  <  3:703394/275‑1 (MQ=255)
                                                                                                                                                                                       cGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTc                                                                                            <  1:32693/274‑1 (MQ=255)
                                                                                                                                                                                        ggaaTCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAAGTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGAtt                                                                                       <  2:473338/275‑1 (MQ=255)
                                                                                                                                                                                                 aaCACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTCAATAGTTGGCGGTGATGTGGTTCATCACTTCCCGCGGTTAAAACTCACCCGGTTCGATCTTCAACTGTCCCGATTCAATCt                                                                                 >  3:296254/1‑275 (MQ=255)
                                                                                                                                                                                                    acGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGCTGTGGTTCATCACTTCACGCGGTGAAAACTAACGCCGTTCGATCTTCAACTGTTCCGATTCCATCTTCgaca                                                                           >  4:244690/1‑276 (MQ=255)
                                                                                                                                                                                                        aTAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCCCGCGGTGAACACTCACGCGGTTCGATCTTCCACTGTTCCGATTCAATCTTCGAGaaa                                                                         >  2:465066/1‑276 (MQ=255)
                                                                                                                                                                                                              agaTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCgag                                                                    <  1:804815/275‑1 (MQ=255)
                                                                                                                                                                                                              agaTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGAGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCgag                                                                    >  1:659061/1‑275 (MQ=255)
                                                                                                                                                                                                                aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATaaa                                                                                                                                                                                                        >  2:260608/1‑141 (MQ=255)
                                                                                                                                                                                                                aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTaccacc                                                                                                                                                                         >  4:212742/1‑172 (MQ=255)
                                                                                                                                                                                                                aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCCATTGTTCCGATTCAATCTTCGAGCAATCGAGAatat                                                               >  2:508197/1‑278 (MQ=255)
                                                                                                                                                                                                                 tAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                       <  4:260608/141‑1 (MQ=255)
                                                                                                                                                                                                                 tAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                        <  2:212742/172‑1 (MQ=255)
                                                                                                                                                                                                                  aaTCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGGGAAAACTCACGCGGGTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATc                                                              >  2:170570/1‑277 (MQ=255)
                                                                                                                                                                                                                  aaTCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATAACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAat                                                                 >  1:151433/1‑274 (MQ=255)
                                                                                                                                                                                                                         aTCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCAGGt                                                                                                                                                                                                                >  3:84095/1‑124 (MQ=255)
                                                                                                                                                                                                                          tCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGAt                                                        >  1:648542/1‑275 (MQ=255)
                                                                                                                                                                                                                             gcgggAACATGCAAAACTATACAGCCGGGATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATaa                                                      <  1:849089/274‑1 (MQ=255)
                                                                                                                                                                                                                              cgcgAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAAtt                                                    >  2:18923/1‑275 (MQ=255)
                                                                                                                                                                                                                                   aacttcAAAACTCAACAGCCGGTATCGGATAATGTTAGGGCATTACTGAACAGGTGGGAGATGACCTGCTGGAAACGACTCGGGGCGCCATGTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  4:465066/273‑1 (MQ=255)
                                                                                                                                                                                                                                      tgaaaaaATATACAGCCGGTATCGGTGAAGTTTATGGCGTTACTGAAAAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  1:735034/272‑1 (MQ=255)
                                                                                                                                                                                                                                      tGCAAAACTATACCGCCGGTATCGGTGAATTTTATGGCGCTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTAAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  1:108212/275‑1 (MQ=255)
                                                                                                                                                                                                                                      tGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  3:648540/275‑1 (MQ=255)
                                                                                                                                                                                                                                      tGCAAAACGATACCGGCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTTGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  1:564379/275‑1 (MQ=255)
                                                                                                                                                                                                                                      gacagaacttaaCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGGGATGACCTGCTGTAAACGCATCGGGTGGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  1:638449/264‑1 (MQ=255)
                                                                                                                                                                                                                                                taCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTACCTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAAAATATCGCTGATAATTGTCAACAACAGGCGGAAaga                                >  2:16829/1‑277 (MQ=255)
                                                                                                                                                                                                                                                taCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGCGAATATCGGTGATACTTTTCAACAACAGTCTGGa                                   >  3:130190/1‑274 (MQ=255)
                                                                                                                                                                                                                                                   aGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAagag                               <  1:148552/275‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACTCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATCCAATCTTCGAGAAACCGAGAATATCGCGGATATGTTTCAACAAAAGGATGgaggaga                              >  3:588428/1‑273 (MQ=255)
                                                                                                                                                                                                                                                        gTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTTAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATACCGCTTAAAATTTTCAACAACCGGCTGGCAGGgttgttac                        >  4:469232/1‑275 (MQ=255)
                                                                                                                                                                                                                                                           tCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCAcg                                                                                                                                <  3:33423/170‑1 (MQ=255)
                                                                                                                                                                                                                                                             ggTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTg                     <  3:672829/275‑1 (MQ=255)
                                                                                                                                                                                                                                                               tGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCACTAAAGCAGTACAAGCCTAACTGCTTGCGTCCCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTAATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGGTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGTCTGTAAGAGTTGTTCATTg                     >  3:140098/1‑273 (MQ=255)
                                                                                                                                                                                                                                                               tGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCCAAAAATCGAGAATCTCGCTGATAATTTTCAACAACCGGCTGGAAGAGTTTGTCCTTGccct                 >  4:565997/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                             ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGTGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACACCAGGCTGGAAGAGTTGTTAATTCCCGTCACCAGCCGATc     >  1:544795/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                             ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGATAAATCGAGAATATCCCTTATAATTTTCAACAACAGGCTGGAAGATTTGTTCATTCCCGTCCCCAGCCGacacaa  >  4:164555/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                
GTAAACTGGCTGCCCATTCCC‑GGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGG‑AAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAACTGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGAC  >  NC_000913/2317823‑2318367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A