Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F68 I1 R1 10 128.3 2671774 89.8% 2399253 257.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,318,095 C→G L594F (TTG→TTC)  rcsC ← hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,318,0950CG99.0% 374.0 / NA 104L594F (TTG→TTC) rcsChybrid sensory kinase in two‑component regulatory system with RcsB and YojN
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (53/50);  minor base T (1/0);  total (54/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

GTAAACTGGCTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGAC  >  NC_000913/2317823‑2318367
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                 
gTAAACTGGCTGCCCATTCCCGGTTCTGAATCTACCGAACAATAGCCGTCCCTCCTGCTGATCAGTTTTTCACAAATCGCCAGACCCCGACCGGTCCCCTTGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGaa                                                                                                                                                                                                                                                                                 <  3:647251/275‑1 (MQ=255)
         cTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGga                                                                                                                                                                                                                                                                        >  1:595186/1‑275 (MQ=255)
           gCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCCCAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGACGGGATCAAACACGCGCACCCCTTCTTTCGCCGGTATCCCCACCCCGGTATCGCGAACACGGATAGAGAGATAATCGCCCTCCGCGCGAACATGCAACACTAATCCGCCCGTATCGGTGAATTTTTTGTCGTTACTGAACAGGTTGgaac                                                                                                                                                                                                                                                                      >  3:11717/1‑273 (MQ=255)
           gCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATg                                                                                                                                                                                                                                                                    >  2:480929/1‑277 (MQ=255)
            caccttCCCGGTTATGAATCTACCGAGATATCCCCTTCCCTCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGGCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGAc                                                                                                                                                                                                                                                                  <  4:480929/274‑1 (MQ=255)
               gtagtttatgcacaaTCTACCGAAAAACCACCGGCCCTCATCCTGTACCGTTTTTCCACAACCGCCACACCCAGTCCGGTCCCCGTGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGAACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTG‑ATTTTATGGCGTTACTGAACAGGTTGGAGATGAcc                                                                                                                                                                                                                                                                 <  3:370182/262‑1 (MQ=255)
               aTTCCCGGGTATGAATCGACCGAGAAATTGCCGTCCATCATGCTGATCAGTTTTTCACACATCGCCAGGCCCAGACCGGTCCCCTGGAAATTACGCTGTACCCCCGGTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGAc                                                                                                                                                                                                                                                                  <  3:572456/275‑1 (MQ=255)
                      gTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCCCGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATAAAGCCGGTATCGGGGAATTTTATGGCGTTCCTGAACAGGTTGgata                                                                                                                                                                                                                                                                      >  1:572456/1‑262 (MQ=255)
                       ttCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGCTCAAACAAGCGCACCACTTCTTTCGCCGGTATCACCACGCCGGTATCGCGAACACGGATAGAGAGATAACCGCCAGCCGCCCGAAAATGCCAAACTAGACAGCCGGACACGGTGACTTTTACGGTGTGACTGAACCAGTTGGAGATGAACTGCTTTaaa                                                                                                                                                                                                                                                        >  4:320735/1‑277 (MQ=255)
                         cTGAATCTACCGAGATATCGCCGGCCATCATGCTTATCCGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGAGCACCACTTCTTTCGCCGGTATCCCCACGCCAGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTaaa                                                                                                                                                                                                                                                        <  3:382953/275‑1 (MQ=255)
                                 aCCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCGAAACTATACAGCCGGTATCGGTTACTTTTATGGCGTTACTGAACGGGTTGGTGTTGTCCGCCTGTTAACGCATCg                                                                                                                                                                                                                                                 >  1:480270/1‑274 (MQ=255)
                                 aCCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCg                                                                                                                                                                                                                                                 >  1:382046/1‑274 (MQ=255)
                                 aCCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCg                                                                                                                                                                                                                                                 >  1:385251/1‑274 (MQ=255)
                                 aCCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTAT‑CCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCTTTACTGAAAAGGTTGGAGATGACCTGCTGTAAACGCATCGGTTc                                                                                                                                                                                                                                             >  2:82177/1‑277 (MQ=255)
                                 aCCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGACGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTAGCGGTGAATTTTATGGCGTTACTTAACAAGTTGGAGCTTCCCTTCTGAAAACGAAACGGGTc                                                                                                                                                                                                                                             >  2:579325/1‑278 (MQ=255)
                                  ccGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTc                                                                                                                                                                                                                                             <  2:410165/277‑1 (MQ=255)
                                   cGAGATCTCGCCGTCCATCATGCTGATCAGTTTTTAACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGt                                                                                                                                                                                                                                              <  1:608451/275‑1 (MQ=255)
                                         atCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTG‑ATTTTATGGCGTTACTGAACAGGTTGGAGAt                                                                                                                                                                                                                                                                     >  1:370182/1‑245 (MQ=255)
                                           cGCCGACCATCATGCTGATCAGTGCACCCCAAATCGCCAGACCCAGACCGGCCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAg                                                                                                                                                                                                                                   <  2:180893/278‑1 (MQ=255)
                                               gTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAgg                                                                                                                                                                                                                                  >  1:190223/1‑275 (MQ=255)
                                                tCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCCAACACGGATAGAGAGATAATCGCCATCCGCGCGCACATCCAAAACCATACAGCCGGTAACGGAGCATTTTATGGCGTTACTGCACAGGTTTGAGATAACCTGCTGTAAACGCATCGGGTCGCCCTTTAAGGCCAc                                                                                                                                                                                                                              >  4:584083/1‑278 (MQ=255)
                                                               aGTTTTTCCCCAATCGCCCGACCCCACCCGGGCCCCTGGAAATTACGCTTGACGCCCGTTCCGACCTGGAAGAAGGGATAAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCgg                                                                                                                                                                                                                  <  3:554126/275‑1 (MQ=255)
                                                               aGTTTTCCACACACATCCATACCCGGACCCTGCCCCTGTAAATTACGCGGTGCACACATTCCTAGCAGGGAGAATGGTGCAAAAAGGCGCACCACGTCTTTCTCCGGTATCCCCATGCCGGTATCGGGCACCCAGATAGAGGGAGAGTCGCCATCCGCGCGAACATGCAAAACTATACAGCCAGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCgg                                                                                                                                                                                                                  <  3:516547/275‑1 (MQ=255)
                                                                 ttttgcgccaaccGCCAGACCCAGCCCGCTCCCCTGGAATTTACGCTGTACGCCCGTGCCGACCTGGAAGAAGGGTTCAAACAAGCTCACCCCTTCTGTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGAGAATCGCCATCCGCGCGAACATGCAAAACTATACAGCAGGTATCGNTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCaa                                                                                                                                                                                                             <  4:339902/266‑1 (MQ=255)
                                                                   tttCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGCTAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGACGGTATCGGTGAATTTTATGGCGTTACTGAACCGGTTGGAGATGACCTGCTGGAAACGCAGCGGATCGCCATTTAAGGCCATTGGCACATCCGGTTGAATa                                                                                                                                                                                                           >  2:27640/1‑278 (MQ=255)
                                                                    ttCACAAACCGCCCGCCCCATACCGGGCCCCTGGAAATTACCCGGTCCGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGAACCACTGCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGCTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCaa                                                                                                                                                                                                             <  3:595186/275‑1 (MQ=255)
                                                                      ccccaagcGCCAGACCCAGACCGGGCCCCCGGAAATTGCGCCGTCCGCCCGTTCCGACCTGGGAGAAGGGATCAACCAAGCCCACACCTTCCTTCGCCCGCATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAANTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                        <  4:344084/271‑1 (MQ=255)
                                                                      cacaACTCGCCAGACCCAGACCGGTCCCCAGGAAATTACGCTGGACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATACCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACGATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAg                                                                                                                                                                                                        <  2:441576/278‑1 (MQ=255)
                                                                           aTCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGcccc                                                                                                                                                                                                                              >  3:392319/1‑249 (MQ=255)
                                                                           aTCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGAACTGGCAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCTCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACTTTCAAAACTATAAACCCGCGAACGGTGAATTTTATTGCGTAACTGACCCGGTTTGCGATGACCTGCGGCAACGTCATCGGGTCGCGATTTAAGGCATAGGGCACATCTGGtcacacaaagat                                                                                                                                                                                                      >  3:188201/1‑264 (MQ=255)
                                                                            tCGCCAGCCCCCAACCGGTCCCCTTGAAATTCCGCTGTACTCCCGTTCCGCCCGGGAAGAAGGGATCAAACAACCGCACCACTTCTTTCGCCGGTATCCCCCCGCCGGTATCGCAACCACGAATAGAGAGATAATCGCCATCCGCGCGAACATGCAAACCTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                  <  2:622515/278‑1 (MQ=255)
                                                                             cGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACa                                                                                                                                                                                                 <  4:363275/278‑1 (MQ=255)
                                                                               ccggccccaggccCGTCCCCCGGAAATTCCGCTGTACGCCCGGTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGGGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                  <  3:385251/270‑1 (MQ=255)
                                                                               ccagacccagacCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGc                                                                                                                                                                                                                          <  1:392319/251‑1 (MQ=255)
                                                                               ccagacccacacCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTAc                                                                                                                                                                                                  <  1:34975/275‑1 (MQ=255)
                                                                                             gTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACGACTTCTTTCGCCGGTATCCCCACGCCAGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGTGTTACTGAAAAGGTTGGCGATGACCTGCTGTAAACGCATCGGGTCGACATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGGACAAGCCTAACTGCTTGCg                                                                                                                                                                                 >  2:345842/1‑278 (MQ=255)
                                                                                             gTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAAATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCg                                                                                                                                                                                 >  2:537859/1‑278 (MQ=255)
                                                                                              tCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAAGCTGCAAAACTATAAAGCCGGAAACGGTGAAGTTTCTGGAGTTACTGAACAGGGTGGCGATGAGCTGCTGTAAACGCATTGGGTCGCCATTTAAGCCCACTGGCCCATCCGGTTCAATAAAGCAGAACAAGCCTAACTGCTTGCGt                                                                                                                                                                                >  4:268293/1‑278 (MQ=255)
                                                                                                      aaaTTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGGTCAAACAAGCGCACCACTTCGTTCGCCGGTATCCCCACGCCGGTATCGCGAACCCGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTaccac                                                                                                                                                                           <  1:260793/275‑1 (MQ=255)
                                                                                                        agtACGCTGTCCGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCGTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                         <  1:11717/273‑1 (MQ=255)
                                                                                                        aTTACGCTGTCCGCCCGTTCCGGCCTGGAAGAAGGGATCAAACAAGCGCCACACTTCTTTCGCCGGTATCCCCGCGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                         <  1:643480/275‑1 (MQ=255)
                                                                                                         gtACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCg                                                                                                                                                                      <  2:584083/276‑1 (MQ=255)
                                                                                                         ctACGCTTTACGCCCGTTCCAACCTGAAAGAAGGGATCAAACAAGCGCAACACTTCTTTCGCCGTTATCCCCACGACGGGATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAg                                                                                                                                                                        <  1:544876/274‑1 (MQ=255)
                                                                                                          tACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCCATACAGCAGTACAAGCCCAACTGCTTTGGTACCAACAGc                                                                                                                                                                       >  1:290054/1‑275 (MQ=255)
                                                                                                            cGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTaa                                                                                                                                                                  >  2:550436/1‑278 (MQ=255)
                                                                                                             gCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGt                                                                                                                                                                    <  3:382046/275‑1 (MQ=255)
                                                                                                                 tACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATatt                                                                                                                                                             >  2:199372/1‑276 (MQ=255)
                                                                                                                       cGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTgg                                                                                                                                                          <  1:204672/275‑1 (MQ=255)
                                                                                                                         ttCCGACCTTGAAGAACGAATCAAACAAGCGCACCCCTCCTTTCGCCGGTAGCCCCCCGCCGGTATCGCGAACACGGATAGGGAGATAATCGCCATCCGCGCGAACATGCAAAACGATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCg                                                                                                                                                        <  3:180321/275‑1 (MQ=255)
                                                                                                                           ccGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCgg                                                                                                                                                       >  1:98505/1‑274 (MQ=255)
                                                                                                                           ccGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGa                                                                                                                                                    >  2:531718/1‑277 (MQ=255)
                                                                                                                             gACCTGGAAGAAGGGAACAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGa                                                                                                                                                    <  1:138312/275‑1 (MQ=255)
                                                                                                                                             tCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTCACTCCTTGCGTACCACCAGCGGTCAATAGTTGGGGGTGAGGTGGTTCATCCATTCAc                                                                                                                                  >  4:210577/1‑277 (MQ=255)
                                                                                                                                             tCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGCTGTGGTTCATCAccttaac                                                                                                                                 >  2:178684/1‑272 (MQ=255)
                                                                                                                                             tCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGACTAACTGCTTGCGTCCCCACAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACtt                                                                                                                                     >  1:87940/1‑274 (MQ=255)
                                                                                                                                              cAAACAAGCGCACCCCGTCTGGCGGCGGTATCCACAAGCCGGGTACACGCACACGGAATGAGAGAAAATCGCCAGCCGCGCGAAAATGGAAAACTATACAGCCGGTATCGGTGAATGTTGTGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCAcg                                                                                                                                 <  4:550436/277‑1 (MQ=255)
                                                                                                                                               aaaCACGCGCCCCCCGTCTTTCGCCGGTATCCCCCCGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCAcgc                                                                                                                                <  4:531718/277‑1 (MQ=255)
                                                                                                                                                     gcgcACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCCCCAGCGGTAAATAGTTGGCGGTGATGTTGTTCATCACTTCACGCGGTGaaa                                                                                                                         >  2:506410/1‑278 (MQ=255)
                                                                                                                                                                  ctCGCCGGTATCCCCACACCGATAGCGCAAACACGGATAGAGAGATAAGCGCCATCCGCGCGAACATGCAAAACTCTACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGACGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                             <  4:199372/276‑1 (MQ=255)
                                                                                                                                                                   tCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCTTTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACGCCTTGCGTACCACCAGGCGTAAATCGTTTGTGGGAATTGTGTGCATAAGTTAACGCGGTGAAGACTCACGCGGTTCg                                                                                                           >  4:547033/1‑278 (MQ=255)
                                                                                                                                                                    ggCCGGTAACCCCACGCCGGTAGAGCGAACACTGAAAGAGAGATAACCGCAATCCGCGCGAAAATGCAAAACTATGACGCCGGTATAGGTGAATTTTATGGCGGTACTGAACAGGTTGGAGATGCCCTGCGGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTAATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                             <  3:556619/274‑1 (MQ=255)
                                                                                                                                                                    ctccGGAAGCCCCCCGCCAGAATCGCGAAAGCGGATAGGGAGAGAAGACCCATCCGCGCGAACATGCAAAACAATACAGCCGGTATCGGTGAAATTGATGGCGTTAATGGAAAGGTTGGAGATGACCGGCTGTAAACGCGGCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTTCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                             <  3:231227/273‑1 (MQ=255)
                                                                                                                                                                     gCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTCCCAGCCTAACTGCTTGTGTACCACCCGGGGTAAATGTTTGGCGGTTAAGTTGTTAATCAATTCCCGCGGTGAAAACCCACGCGGtt                                                                                                             >  3:486234/1‑274 (MQ=255)
                                                                                                                                                                     gCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTacc                                                                                                                                                                             >  3:1149/1‑210 (MQ=255)
                                                                                                                                                                      caggTATCCCCAGCCCGGTATAGAACAAAAGGATAAAGGGATAACAGCCAGTCGAGTGAACAGTAAAAACTATAACGACGGTACCGGGGAATTTGATGGCGTTCCTGAACAAGTAGGTGAAGACATGCTATTAAGCCATCGGGTCGCCATTTAAGGCCTATGGCACATCCGGTTCAATAAAGAAGGACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTAATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                             <  3:531750/271‑1 (MQ=255)
                                                                                                                                                                         gTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTAccacca                                                                                                                                                                         <  1:1149/210‑1 (MQ=255)
                                                                                                                                                                           aTCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCAAGCGGTTCGATCt                                                                                                       >  1:23901/1‑274 (MQ=255)
                                                                                                                                                                              cccACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCaa                                                                                                   <  1:486234/275‑1 (MQ=255)
                                                                                                                                                                                     cGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCgg                                                                                                                                                                                                                                                >  3:410095/1‑127 (MQ=255)
                                                                                                                                                                                       gTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCCCGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGa                                                                                         >  1:631249/1‑275 (MQ=255)
                                                                                                                                                                                        tATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATCAAGCAGTACAAGCCTAACTGCTTGCGTacca                                                                                                                                                                            >  4:253324/1‑192 (MQ=255)
                                                                                                                                                                                         aTCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCg                                                                                                                                                                                                                                            <  1:410095/127‑1 (MQ=255)
                                                                                                                                                                                         aTCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTaccac                                                                                                                                                                           <  2:253324/192‑1 (MQ=255)
                                                                                                                                                                                             cgAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGt                                                                                                              >  4:392559/1‑249 (MQ=255)
                                                                                                                                                                                              gAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGtt                                                                                                             <  2:392559/249‑1 (MQ=255)
                                                                                                                                                                                                            agaTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACACGCCTAACTGCTTGCGTACCACCAGCGGTAAATCGTTGGCGGTGAGGTGGTTCATCACTTCCCGCGGTGAAAACTCACGAGGTTCGATCTTCAAC‑TGGTCCGATTCAATCTTCGAGACATCGAGAat                                                                 >  2:320210/1‑278 (MQ=255)
                                                                                                                                                                                                            agaTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAat                                                                 >  2:110669/1‑278 (MQ=255)
                                                                                                                                                                                                              aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTTCTGTAACCGCATCGGGTCGCCATTTAAGGCCACTGGCACATGCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGCAACTAGt                                                                                                                                                             >  3:608168/1‑185 (MQ=255)
                                                                                                                                                                                                              aTAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGCTACTGAACAGGTTGGTGACTACCTGCTCTAAACGCTTCGGGTCGCCATTTAAGGCCAATGCAACCTCCGGTTCAATAAAGCATTACAAGCCTAACCGCTGTCGTATCACCAGCGGGAAAAAGTTGTCGTAGATGTGGCTTCCCACTTCACGCGGAGAACACCCACTTGGTTGGATC‑TCACCATTTTCGGATCCAATCACCCAGAAAGCgagagtca                                                               >  4:588072/1‑274 (MQ=255)
                                                                                                                                                                                                                  tCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATGTAAGGCCGCTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACGGCTTGCGTACCACCAGCGGTAAATAGTTGGc                                                                                                                                                         <  1:608168/185‑1 (MQ=255)
                                                                                                                                                                                                                        tCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCCCTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTCCGAGAAATCGAGAATATCGCTGATact                                                     >  2:319761/1‑276 (MQ=255)
                                                                                                                                                                                                                        tCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGAt                                                        >  1:214810/1‑275 (MQ=255)
                                                                                                                                                                                                                            cgcgAAAATGCAAAACTATACGGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAAtt                                                    <  1:267954/275‑1 (MQ=255)
                                                                                                                                                                                                                                   gaaagaaaCTATACAGCCGGTATGGGTGAATTTTACGTCGTTACTGAACAGGTTGGCGAGGACCTGCTGTAAACGCATCGGGTCCCCATGTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAacaaca                                          <  4:485459/273‑1 (MQ=255)
                                                                                                                                                                                                                                    agCAAAACTATACGGCCGGTATCGGGGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTTAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTcaacaa                                            <  3:631249/274‑1 (MQ=255)
                                                                                                                                                                                                                                     tgaaaaCTATAGAGCCGGTATCGGGGAATGTTCTGGCGTGAATGAACAAGTCGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGAAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATGTTCAACAACAgg                                        <  4:27640/276‑1 (MQ=255)
                                                                                                                                                                                                                                         aaCTATACAGACAGTATCGGGGAATTTTAGGGCGTGACTGAACAGGTTAGAGTGGACCGCATGTAAACGAATCGGTTCGCCATTTAAGGCCACGGGCACATCCGGTTCAATAAAGCAGTACAGGCCGAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCCGTGATGTGGTTCATCACTTCACGCCGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGc                                       <  3:589760/275‑1 (MQ=255)
                                                                                                                                                                                                                                          aCTATACAGCGGGTATCGGTGAATGTTATGTCGTGACTGAACCGGTGGGAGATGACCTGCGGTAAACTCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAAGAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTgg                                    <  2:203672/277‑1 (MQ=255)
                                                                                                                                                                                                                                             ataCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTTGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGTCTGGaat                                 >  2:301928/1‑276 (MQ=255)
                                                                                                                                                                                                                                              taCAGCCGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTACGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAaga                                >  2:90434/1‑277 (MQ=255)
                                                                                                                                                                                                                                                   ccGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCAc                                                                                                                                  >  2:55561/1‑175 (MQ=255)
                                                                                                                                                                                                                                                   ccGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCaacaac                                           >  2:485459/1‑261 (MQ=255)
                                                                                                                                                                                                                                                    cGGTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCAcg                                                                                                                                 <  4:55561/175‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACTCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAgttgt                           >  1:16032/1‑275 (MQ=255)
                                                                                                                                                                                                                                                      gTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCNGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCACC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATAACGCTGATAATTTTCACAAACAGGCTGGAAGAGTTGTTCAt                       >  4:336270/1‑278 (MQ=255)
                                                                                                                                                                                                                                                      gTATCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTTGAAGAgtttgt                          >  3:189302/1‑272 (MQ=255)
                                                                                                                                                                                                                                                        aTCGGTGAATTTTATGGCGTTACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCCGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCAtt                      >  2:14654/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                           ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTTGCGGTGCTGTGGTTCATCCCTTCACGCAGTGCAAACTCACGCGGTTCGATCTTCAAC‑TGTTACGCTTCAATCTTCGAGACATCTAGCATATCTCTGATAATTTTCCACAACAGCATGGAGACGTTTTTCTTTGACGTCCCCATCCGAtgcac  >  4:186016/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                           ttACTGAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATACCg                                                             >  3:293408/1‑219 (MQ=255)
                                                                                                                                                                                                                                                                             aaccAACAGGTTGGGGGTGACCTGCAGTAAACGCATCGGGGCGGCATTTACGGCCACGGGAACATCCGGTTCAATAAAGCAGTGCAAGCCGAACTGCTTGCGTACCACCTGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCGCGGGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TTTTCCGATTCAATCGTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGa   <  3:480270/272‑1 (MQ=255)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                 
GTAAACTGGCTGCCCATTCCCGGTTCTGAATCTACCGAGATATCGCCGTCCATCATGCTGATCAGTTTTTCACAAATCGCCAGACCCAGACCGGTCCCCTGGAAATTACGCTGTACGCCCGTTCCGACCTGGAAGAAGGGATCAAACAAGCGCACCACTTCTTTCGCCGGTATCCCCACGCCGGTATCGCGAACACGGATAGAGAGATAATCGCCATCCGCGCGAACATGCAAAACTATACAGCCGGTATCGGTGAATTTTATGGCGTTACTCAACAGGTTGGAGATGACCTGCTGTAAACGCATCGGGTCGCCATTTAAGGCCACTGGCACATCCGGTTCAATAAAGCAGTACAAGCCTAACTGCTTGCGTACCACCAGCGGTAAATAGTTGGCGGTGATGTGGTTCATCACTTCACGCGGTGAAAACTCACGCGGTTCGATCTTCAAC‑TGTTCCGATTCAATCTTCGAGAAATCGAGAATATCGCTGATAATTTTCAACAACAGGCTGGAAGAGTTGTTCATTGCCGTCACCAGCCGATCGAC  >  NC_000913/2317823‑2318367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A