Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F10 I0 R1
|
85 |
228.3 |
8665814 |
85.8% |
7435268 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
2,170,724 |
G→T |
31.2% |
intergenic (‑41/+267) |
gatY ← / ← fbaB |
D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 2,170,724 | 0 | G | T | 31.2%
| 281.4
/ 42.3
| 167 | intergenic (‑41/+267) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (54/53); new base T (35/21); total (90/77) |
| Fisher's exact test for biased strand distribution p-value = 1.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 170 total aligned reads displayed.
TTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACA > CP009273/2170576‑2170870
|
tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa < 2:28369/149‑1 (MQ=255)
cTACCACCACTTGCATCGTTTCGAGAGTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa > 2:2762961/1‑149 (MQ=255)
tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 2:4201960/149‑1 (MQ=255)
accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 2:2044585/149‑1 (MQ=255)
ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATAAAAAGAAattaat > 2:342245/1‑147 (MQ=255)
ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAAATAAattatt > 2:2747747/1‑149 (MQ=255)
acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg < 2:1278896/149‑1 (MQ=255)
ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 2:3113971/149‑1 (MQ=255)
ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 2:3114046/149‑1 (MQ=255)
gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:1512915/149‑1 (MQ=255)
tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAAAAATGAAAATATttttttttta > 2:4036564/1‑147 (MQ=255)
tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTTTTTTTAAATAAAAAAAAAAAATTTTTTTTTat > 1:1088309/1‑148 (MQ=255)
cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTaaa < 1:1106431/149‑1 (MQ=255)
gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTTAAAATATAATTAAATTATtttttttttttt > 2:3269935/1‑145 (MQ=255)
tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATc < 2:4274109/149‑1 (MQ=255)
agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAAAAATAAATTATTTTTTTTTAAATATagag > 2:1931442/1‑149 (MQ=255)
agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAATTAAATTATTTTTTTTTAAATATCgag > 2:1931728/1‑149 (MQ=255)
gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAAAATAATTAAAATAATTTTTTTTAAATATAgag‑a > 1:2499666/1‑149 (MQ=255)
gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATTAAATTATTTTTTTTTTAatatatata > 1:2753608/1‑144 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑At < 2:2487840/149‑1 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑At < 1:1325251/149‑1 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑At < 2:330232/149‑1 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑At < 1:330282/149‑1 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTGGTTTTTGATTTAAAAAAATAATTAAAATATTTTTTTTTTAAAATagagtt > 1:3337635/1‑147 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGTTTTTTGATTTTAAAATATAATTTAAATATTTTTTTTTTAataaaattat > 1:3339543/1‑142 (MQ=255)
ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGTTTTAAAAATATAAATAAATTAATTTTTTTTTAATTTTGAt‑ata > 1:827255/1‑149 (MQ=255)
tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATaa < 2:2917097/149‑1 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAAc < 1:2219365/149‑1 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAAc < 1:2219528/149‑1 (MQ=255)
tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACg < 2:1064511/149‑1 (MQ=255)
gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGTATTTAAAAAAATAATGAAATTATTTTTTTTTTAATATAGAG‑ATAAcca > 2:810570/1‑147 (MQ=255)
gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGa > 2:2449120/1‑149 (MQ=255)
atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTATTTGAAAATATAAAGTAAATAATTTTTTTTTAATATATTG‑ATAAAGAta > 1:3450486/1‑148 (MQ=255)
tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATca < 2:1172477/149‑1 (MQ=255)
tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATca < 2:1172497/149‑1 (MQ=255)
tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATca < 1:11132/149‑1 (MQ=255)
atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATcac < 2:631525/149‑1 (MQ=255)
atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATcac < 1:1759839/149‑1 (MQ=255)
aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTGAAAATATAATGAAATTATTTGTTTTTTAATATAGAG‑ATTACGATAACaaaaa > 2:3599054/1‑149 (MQ=255)
tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAAAGAAAATATTTTTTTTTAAATATAGAG‑ATAACGATCACaaaaaa > 2:3387954/1‑148 (MQ=255)
tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATTATTAAATTTTTTTTTTTTTTATATAGAG‑ATAAAGATCACAAAAAc > 2:2121194/1‑149 (MQ=255)
gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTTTTTTGGATTTGAAAAAATAAATTAATTATTTTTTTTTTAATATAGTG‑AGTAAGATCACaaacaag > 1:940971/1‑145 (MQ=255)
ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTTAATATAGAG‑ATTACGCTCACaaaaaaaaca > 2:86438/1‑144 (MQ=255)
ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTCAAAAAAAAATTAAATTATTTTTTTTTTAATATAGAG‑TTTAAGATCACaaaaaaaaaa > 1:334495/1‑144 (MQ=255)
ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAAAAAATTTAAATATTTTTTTTTTAATATAGAT‑GTAAAGATAACaaaaaacaaa > 1:4311868/1‑144 (MQ=255)
ccGAATAACCGCCGCGGTTTGCGTTTTTCAGCATAGGCTTTGTCTATACCACGTACATTTTCATATCCTTTCTTTTGTTTTCTTTTTAAAAATATAATTAAATTATTTTTTTTTAAATATCTAT‑ATAACTATCACAAACACGACAatat < 2:3839012/149‑1 (MQ=255)
aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTGAAAATATAATTTAATTATTTTTTTTTTAATATAGAG‑ATAACAATAAAAAAAACAACAATATTaaa > 2:964104/1‑149 (MQ=255)
aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAAATAAATTATTTTTTTTTTAATATATTG‑ATAAAGATCAAAAAAAATACAATATGAAAat > 1:4220178/1‑149 (MQ=255)
aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAATGAAATTATTTTTTTTTAAATATGGAG‑ATAACTATCACAAAAACGACAAAATTAAAat > 2:2741543/1‑149 (MQ=255)
ccgccgCGCTGTGCGTTGTTCAGCATCTGATTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAG‑ATAACTATCACAAAAACGACAATATGAAAatta < 2:2371755/149‑1 (MQ=255)
ccgccgCGCTGTGCGTTGTTCAGCATCGGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAatta < 2:2372225/149‑1 (MQ=255)
gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAAATTAAATATTTTTTTTTAAATATAGAG‑ATAAAGAAAACAAAAAAGAAAATATTAAAaatatt > 2:455959/1‑149 (MQ=255)
gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAATATAATTAAATTTTTTTTTTTTTAATATAGAG‑ATAACGAACAAAAAAACGAAAAAATGAAAaataat > 2:969051/1‑147 (MQ=255)
gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAAAAAAATAAAATATTTTTTTTTTAATAAAGAG‑AAAACGAGAAAAAAAAACAAAAAATTAAAaatatt > 2:457245/1‑149 (MQ=255)
cTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGAT‑ATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:1966972/149‑1 (MQ=255)
cTGTGCGTTGTACAGAATCTGCTTTGGCGATACCACGTACATTTTCAAATCCTGACGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:1965296/149‑1 (MQ=255)
tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATATAATGTAAATATTTTTTTTTAAATTTCGAT‑ATAAAGATCACAAAAAAGACAATATGTAAATTTTTCgaggtg > 2:4302721/1‑147 (MQ=255)
ggtgCGTTGTTCAGAATCTGTTTGGTCGATACCACGAACATTTTCATATCCGGTCTTTTGTTTGCCATTAAAAAATATAATTAAATTATTTTTTTTAAAATATCGAT‑AAAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:35659/148‑1 (MQ=255)
gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTTAAAAAATAAATTAAATATTTTTTTTTTAATAAATAT‑ATAAAAAAAAAAAAAAACACAAAATAAAAATTAATAGATTGGTGAAAGGaaaaaa > 1:91770/1‑149 (MQ=255)
aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAAAAAATAAATTATTTTTTTTTTAATAAAGAGAAAAACAAAAAAAAAAACAAAAAAAT‑AAAAATATTCGTGGAGTGAAAGGGcaaaaaa > 1:2829973/1‑149 (MQ=255)
tCTGCTTTGTCTATACCACGTAATTTTTAATATCCTGTCTTTTTTTTTCTATTTCAAAATATATTTAAATTATTTTTTTTTAAATATCGAT‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:1516048/149‑1 (MQ=255)
tGTCTATACCACTTAATTTTTAATATCTTGTCTTTTTTTTTCTATTTAAAATTATAATGAATTTTTTTGTTTTTAATTATCGAT‑ATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 1:2141464/149‑1 (MQ=255)
gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATTTTATTAAATTTTTTTTTTTTAAATTTAGAG‑ATTACGCTGACCAAAAAGACAAAATTAAAATTATTGGGGGGGTGTAATGCAAAAAAAAGGCCTCCCGag > 2:2048851/1‑148 (MQ=255)
tACCACTTACATTTAAATATCCGTTCTTTTGTTTTCTATTAAAAAATATAATCAAATTATTTTTTTTTAAATATCGAG‑ATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAg < 2:1463522/149‑1 (MQ=255)
aCCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTGAAAAAATAATGTAATTATTTGTTTTTTAATATAGAG‑ATAACGATCACAAAAAAGACAATATGTAAATTATTGTTGGAGTGTAAGGCAAAAAAAAGGCCACCCGCTAgg > 2:1333023/1‑149 (MQ=255)
aTTTTCATATCCTGTCGTTTGTTTTAGCTTTCAAAAAATAATGTAATTATTTTTTTTTAAATATAGAG‑ATAACGAACAAAAAAAAGACAAAAATAAAATTATTCGGGGCGTGATAGGCAAAAAAACGGCCGCCCCAGAGGGAAGCCgga > 2:4251543/1‑147 (MQ=255)
ttttCATATCCTGTGGTTTGTTTTCTATTAAAAAATATAATTAAATTTTTTTTTTTTAAATATCGTT‑ATAACGACAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 1:2678315/149‑1 (MQ=255)
aatatCCTGTCTTTTTTTTTCTATTTAAAAATATAATTAAATTATTTTTTTTTAAATATCGAG‑ATAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 1:3598388/148‑1 (MQ=255)
tatCCTGCCGTTTTTTTTCTATTAAAAAATATAATGAAATTATTTTTTTTTAAATATCGAG‑ATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGt < 2:3073451/149‑1 (MQ=255)
aacccTGTCTTTTGTTTTCTATTACAAAATATAATGAAATTTTTTTTTTTTAAATATCGAG‑ATAACTATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGt < 2:3073358/146‑1 (MQ=255)
tCCTGTCGTTTGTTTTCTATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGAG‑ATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgc < 1:3208833/149‑1 (MQ=255)
cTGTCGTTTTTTTTAGATTTCAAAAAATAATGAAAATATTTTTTTTTAAATATAGAG‑ATAAAGATAACAAAAAAAAAAATATTAAAAATATTAGAGGAGTGAAATGCAAAAAAAAAGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc > 2:2517590/1‑149 (MQ=255)
cttttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:2521199/147‑1 (MQ=255)
cGTTTTTTTTCTATTACAAAATATAATTAAATTATTTTTTTTTAAATATCGAG‑ATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 1:2461687/149‑1 (MQ=255)
tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:467750/1‑149 (MQ=255)
tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:3854272/1‑149 (MQ=255)
tttttaCGATTACAAAATAAAATGAAATTTTTTGTTTTTAAATATCTAT‑ATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:3105699/147‑1 (MQ=255)
tgtttTCGATTTCAAAATATAATGAAATTTTTTGTTTTTAAATATCTAG‑ATAACTAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:3105867/149‑1 (MQ=255)
tgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt > 2:3947456/1‑149 (MQ=255)
gtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:414599/1‑149 (MQ=255)
gtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:2439227/1‑149 (MQ=255)
tttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg < 2:137590/149‑1 (MQ=255)
tttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:2374873/1‑149 (MQ=255)
ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGCTCGGGAAGCCGTAGCAACGTGCGCGTGTTTTTATGc > 2:3717430/1‑149 (MQ=255)
tCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:3934663/1‑149 (MQ=255)
gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATTACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:701331/1‑149 (MQ=255)
attaaaaaaTATAATTAAATTATTTTTTTTTAAATATCGAG‑ATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 1:3222370/144‑1 (MQ=255)
tttCAAAATATAATTAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 2:2104290/149‑1 (MQ=255)
taaaaaaaTATATTTAATTTTTTTTTTTTTAAATATCGAT‑AAAACCAAAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:3786419/145‑1 (MQ=255)
ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAATAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 2:2922330/1‑149 (MQ=255)
tacAAAATATAATTAATTTTTTTTTTTTTAAATATCTAT‑ATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 2:415503/147‑1 (MQ=255)
cAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 1:1682364/1‑149 (MQ=255)
aaaaTATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:587801/1‑149 (MQ=255)
aaaaTATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:137577/1‑149 (MQ=255)
aaaaTATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:1240586/1‑149 (MQ=255)
aaTATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 1:1693896/1‑149 (MQ=255)
atatAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCACAGTGCGCGTGTTTGTATGCCGGATGCGgtgt > 1:2962286/1‑149 (MQ=255)
taATCAAATTATTTTTTTTTAAATATCTAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa < 2:3652929/149‑1 (MQ=255)
aaTGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 2:497201/1‑149 (MQ=255)
aTGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:1861892/1‑149 (MQ=255)
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TTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACA > CP009273/2170576‑2170870
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
