Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F60 I0 R1
|
465 |
320.4 |
10502068 |
95.5% |
10029474 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
2,170,713 |
C→A |
20.1% |
intergenic (‑30/+278) |
gatY ← / ← fbaB |
D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 2,170,713 | 0 | C | A | 20.1%
| 542.0
/ 21.5
| 254 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (77/103); new base A (40/21); total (130/124) |
| Fisher's exact test for biased strand distribution p-value = 2.87e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 261 total aligned reads displayed.
TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCG > CP009273/2170565‑2170861
|
ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTc < 2:2949439/149‑1 (MQ=255)
gtGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGACTGCCGGAACCGCAGAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTc < 2:657498/148‑1 (MQ=255)
ggCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCaa > 2:4300670/1‑149 (MQ=255)
agCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCaa < 1:3131838/148‑1 (MQ=255)
gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCaaa < 2:1779041/149‑1 (MQ=255)
gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTaaaa > 2:4527742/1‑149 (MQ=255)
cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:488539/149‑1 (MQ=255)
gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAaaaaaaaaa > 1:3379926/1‑144 (MQ=255)
tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:4574192/149‑1 (MQ=255)
tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTATTTAAAAAaataat > 1:3948052/1‑149 (MQ=255)
ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGTATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 2:58049/149‑1 (MQ=255)
accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGTTTTGAAAATATAATGaaaa > 1:783524/1‑148 (MQ=255)
accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAATATAAAGaaaa > 1:4473086/1‑148 (MQ=255)
caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:1299927/149‑1 (MQ=255)
accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 2:1438040/149‑1 (MQ=255)
accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 1:4277841/149‑1 (MQ=255)
ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 1:4891096/149‑1 (MQ=255)
ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 2:2672095/149‑1 (MQ=255)
tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt < 1:4101006/149‑1 (MQ=255)
tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt < 2:4416674/149‑1 (MQ=255)
gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:359380/149‑1 (MQ=255)
tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTaa > 2:336964/1‑149 (MQ=255)
gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAat < 1:2565699/149‑1 (MQ=255)
gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAat < 2:5014730/149‑1 (MQ=255)
tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAata < 2:1855847/149‑1 (MQ=255)
gtCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAatat < 1:2944361/148‑1 (MQ=255)
tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATc < 1:2113836/149‑1 (MQ=255)
gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAATATTTGTTTTTAAATATCga > 2:1620866/1‑149 (MQ=255)
gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgaga < 1:2692967/149‑1 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAGAGAt > 2:3730162/1‑149 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGAt < 1:3477049/149‑1 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTATATTTAAAAATAAAATTAAAATATTTTTTTTTTAATATACAGAt > 1:2016606/1‑149 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAAAATTAAAATATTTTTTTTTTAATATAGAGAt > 2:3240688/1‑149 (MQ=255)
aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTAAAAAAATAATTAAATTATTTTTTTTTAAATATAGAGAt > 1:1119502/1‑149 (MQ=255)
ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAAGAAATAATTTGTTTTTTAATATCGAGATa > 2:657777/1‑149 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 2:3309468/149‑1 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 2:4681493/149‑1 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:835261/149‑1 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAATGAAAATATTTTTTTTTAAATATAGAGATAAc > 2:3383503/1‑149 (MQ=255)
gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGACACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:2308640/149‑1 (MQ=255)
atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATaaacata > 2:3349665/1‑144 (MQ=255)
tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:1640290/149‑1 (MQ=255)
atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTAAAAAAAAAAATAAAATATTTTTTTTTTAATATATAGATaaaaaaaaa > 1:64774/1‑142 (MQ=255)
atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAAAAAAGAAATTATTTTTTTTTTAAAATAGAGATAAAGaaaac > 2:1805683/1‑145 (MQ=255)
ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcaca > 2:3029990/1‑149 (MQ=255)
ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcaca < 2:5245411/149‑1 (MQ=255)
ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAATATTTGTTTTTAAATATAGAGATAACGATcaca > 2:3030060/1‑149 (MQ=255)
aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATAACaaaa > 2:4779542/1‑149 (MQ=255)
aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAAATAAAGTAATTATTTTTTTTTTAAAATCGATATAACGCTGACaaaaa > 1:4248840/1‑149 (MQ=255)
aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGAGTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACCATAACaaaaa > 2:1176704/1‑149 (MQ=255)
aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTGGATTTCTAAAAATAATTAAATTATTTTTTTTTAAATTTCGATATAACGATAACaaaaa > 2:3069316/1‑149 (MQ=255)
ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:1840052/149‑1 (MQ=255)
ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGAATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:4403015/149‑1 (MQ=255)
gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAAATAATGAAATTAATTTTTTTTTAATATAGAGATAACGATCACAAAAAACACaa > 2:1880218/1‑149 (MQ=255)
ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGATTTTAAAATAATATGAAAATATTTTTTTTTTTATATAGATGTAAAAATCAAAAAAAAAACAaaat > 1:1445769/1‑149 (MQ=255)
cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATTAAATTAATTTTTTTTAAATATCGAGATAAAGATCACAAAAAAGAAAAAATg > 2:748321/1‑149 (MQ=255)
cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAAAGACAATATTaa > 2:2175646/1‑149 (MQ=255)
tAACCGCCGCGCTGTGCGTTGTTCAGCTTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaaa < 2:2598624/149‑1 (MQ=255)
aaaCCCCCGCGCTGTGCGTTCTCCACAATCTCATTTTTCCAAACCAATTAAATTTACATATACTTCCTTTTGTTTACCATTACAAAATATAATCAAATAATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaaa < 2:2760851/148‑1 (MQ=255)
ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATAGAGATAAAGATCAAAAAAACGACAAAATGTAAatta > 2:3395777/1‑149 (MQ=255)
cgccgcGCTGTGCGTTGTTCATCATCTGCTTTGTCGATACCACTTAAATTTTCATATCCTGTCTTTTGTTTTCGTTTTAAAAATATAATGAATTTTTTTTTTTTTAAATATCTATATAACGAACACAAAAACGACAATATGAAAattat < 1:3820870/149‑1 (MQ=255)
gccgcGCGGTGCGTTGTACAGAATCTGCTTTGTCGAACCCACGTAAATTTTCATATCCTGCGGTTTTTTTTCGATTTAAAAATATAATCAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAattatt < 1:5150601/149‑1 (MQ=255)
ccgcGCTGTGCGTTGTTCAGCATGTGCTTTGTCGACACCACTTAATTTTACATAACCTGTCTTTTTTTTTCTTTTAAAAAATATAATTAATTTTTTTTTTTTAAAATATCGATAAAACGAACACAAACACGACAATATGAAAATTATTc < 1:2648721/149‑1 (MQ=255)
ccgcGCTGTGCGTTGATCAGCATCTGATTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTc < 2:1576379/149‑1 (MQ=255)
gcgcTGTGCTTTGTTCAGCATCTGCTTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTACAAAATATAATGAAATTTTTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCga < 1:3854934/149‑1 (MQ=255)
cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAGAGATAAAGATAACAAAAACGCCAAAATGAAAATTATTagag > 2:2902073/1‑149 (MQ=255)
gtgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:2025625/148‑1 (MQ=255)
gtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTAAAAAAATAAATAAAATAATTTTTTTTTAATATATAGGTAAACAACACAAAAAAAAAAAAAATAAAAATATTAGAGGAGt > 1:5024869/1‑149 (MQ=255)
gCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAAAATAATGAAAAAATTTTTTTTTAAAAATATATATAAAGATAAAAAAAAAGAAAAAAATTAAAATATTAGATGAGtta > 1:406183/1‑147 (MQ=255)
cGTTGTGCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATCAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 2:4962347/149‑1 (MQ=255)
gttgttCAGAAGCTGCTTTGCCGATACCACTTAAATTTTAAAAACCTTTCGTTTTTTTTCGATTAAAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGaaa < 2:263187/149‑1 (MQ=255)
ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTGAAAAAAAAAATAAAATATTTTTTTTTTAATATAGAGATAAACATAACAAAAAACACAAAATTAAAATTATTAGAGGGGTGaaaa > 2:2391678/1‑148 (MQ=255)
tttCAGCTTCTTCTTTGTCTATACCACTTAAATTTTAATATCCTGTCGTTTTTTTTCGATTTAAAAATATAATTAAATTATTTTTTTTTAAATTTCTATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGc < 1:292944/148‑1 (MQ=255)
cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTTAATATCGTGTTAACGATAACAAAAACGACAATTTGAAAATTATTCGAGGTGTGTAC‑GGCacaaaa > 2:3064020/1‑149 (MQ=255)
aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATAGAGATAAAGAACACAAAAACGACAAAATGTAAATTATTAGTGGAGTGAAA‑GGCaaaaaaa > 2:2077775/1‑149 (MQ=255)
tCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTTATTTCAAAAAAAATTTAAAATATTTTTTTTTAAATAAAGTGATAAATAAAAAAAAAAATAAAAAATTAAAATTTTTATATGGGTGTAA‑GGCACAAAAAACGCCTCCCg > 1:698082/1‑149 (MQ=255)
tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTTAATATAGAGATAAAGATAACAAAAAAGACAATATGAAAATTATTAGAGGGGTTAAAGGGCAAAAAAACgccacccc > 2:2410891/1‑142 (MQ=255)
tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAATAATGAAAATATTTTTTTTTTAATATCGAGATAAACATAACAAAAACCACAAAATGAAAATTATTAGAGGCGTGAAA‑GGCAAAAAAACCGCCAcccc > 2:3677451/1‑148 (MQ=255)
ttattttttCTTATCCGGTATTTTTTTTTCTATTTCAAATTATAATCAATTTTTTTTTTTTTAAATTTCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGc < 1:992368/144‑1 (MQ=255)
aTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:2156298/149‑1 (MQ=255)
ttCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAATTTATTTGTTTTTAAATATCTAGATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCa < 1:732690/149‑1 (MQ=255)
atatCCTGTCGTTTGTTTTCGATTTCAAAATAAAAATAAAATATTTTTTTTTAAATATCGAGATAACGATCCCAAAAACGACAATATTAAAAATATTCGAGGAGTGAAA‑GGCAAAAAAACCGCCACCCGATAGGGAATCCCTAGCaaat > 2:1306494/1‑148 (MQ=255)
tCCTGTCGTTTGTTTTCGATTTAAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgc < 2:1414841/149‑1 (MQ=255)
ttGTCTTTTTTTTTATATTAAAAAATATAATTAAATTTTTTTTTTTAAAATAACTATATAACCAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 1:3609212/148‑1 (MQ=255)
tttctttttttttCTATTAAAAAATATAATGAAATTTTTTTTTTTTAAATATCGATATAACGATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg < 1:4779542/144‑1 (MQ=255)
tGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGGAGCAAAGTGcgcg > 2:4882920/1‑149 (MQ=255)
cGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt > 1:4217075/1‑149 (MQ=255)
tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:2259973/1‑149 (MQ=255)
gtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:955696/1‑149 (MQ=255)
tttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:2328236/1‑149 (MQ=255)
gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:1580016/1‑149 (MQ=255)
gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:800463/1‑149 (MQ=255)
gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:1175661/1‑149 (MQ=255)
aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 2:4264679/149‑1 (MQ=255)
aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:725494/1‑149 (MQ=255)
tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 2:4025351/1‑149 (MQ=255)
tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 2:1406728/1‑149 (MQ=255)
ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 1:4787569/1‑149 (MQ=255)
ttCAAAATATAATCAATTTTTTTGTTTTTAAATACCTAGATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 1:3673759/149‑1 (MQ=255)
tCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:4811654/1‑149 (MQ=255)
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TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCG > CP009273/2170565‑2170861
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
